RNA–Protein interactions for RNA: ENST00000565379.1

NME3-208, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 911 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-208ENST00000565379 NEDD9Q14511 834 aa29.36■■■□□ 2.29
NME3-208ENST00000565379 PRR16Q569H4 304 aa29.36■■■□□ 2.29
NME3-208ENST00000565379 IPO9Q96P70 1041 aaKnown RBP29.36■■■□□ 2.29
NME3-208ENST00000565379 KCNH7Q9NS40 1196 aa29.36■■■□□ 2.29
NME3-208ENST00000565379 DDX25Q9UHL0 483 aaKnown RBP29.36■■■□□ 2.29
NME3-208ENST00000565379 DDX41Q9UJV9 622 aaKnown RBP29.36■■■□□ 2.29
NME3-208ENST00000565379 ZEB2O60315 1214 aa29.35■■■□□ 2.29
NME3-208ENST00000565379 CABYRO75952 493 aa29.35■■■□□ 2.29
NME3-208ENST00000565379 CYP2C18P33260 490 aa29.35■■■□□ 2.29
NME3-208ENST00000565379 NUCB2P80303 420 aa29.35■■■□□ 2.29
NME3-208ENST00000565379 SMAD3P84022 425 aaKnown RBP29.35■■■□□ 2.29
NME3-208ENST00000565379 PURAQ00577 322 aaKnown RBP29.35■■■□□ 2.29
NME3-208ENST00000565379 RESTQ13127 1097 aa29.35■■■□□ 2.29
NME3-208ENST00000565379 C16orf59Q7L2K0 433 aa29.35■■■□□ 2.29
NME3-208ENST00000565379 CYP2W1Q8TAV3 490 aa29.35■■■□□ 2.29
NME3-208ENST00000565379 ZFP91Q96JP5 570 aaPredicted RBP29.35■■■□□ 2.29
NME3-208ENST00000565379 TBX3O15119 743 aa29.34■■■□□ 2.29
NME3-208ENST00000565379 B4GALT4O60513 344 aa29.34■■■□□ 2.29
NME3-208ENST00000565379 TDP2O95551 362 aa29.34■■■□□ 2.29
NME3-208ENST00000565379 LY6KQ17RY6 165 aa29.34■■■□□ 2.29
NME3-208ENST00000565379 TTC38Q5R3I4 469 aa29.34■■■□□ 2.29
NME3-208ENST00000565379 FERMT3Q86UX7 667 aa29.34■■■□□ 2.29
NME3-208ENST00000565379 KIAA1217Q5T5P2 1943 aa29.33■■■□□ 2.29
NME3-208ENST00000565379 BRD1O95696 1058 aa29.33■■■□□ 2.29
NME3-208ENST00000565379 CSF2RAP15509 400 aa29.33■■■□□ 2.29
NME3-208ENST00000565379 SEMA3FQ13275 785 aa29.33■■■□□ 2.29
NME3-208ENST00000565379 MYSM1Q5VVJ2 828 aa29.33■■■□□ 2.29
NME3-208ENST00000565379 MFSD5Q6N075 450 aa29.33■■■□□ 2.29
NME3-208ENST00000565379 LENG9Q96B70 501 aa29.33■■■□□ 2.29
NME3-208ENST00000565379 RNPC3Q96LT9 517 aaKnown RBP29.33■■■□□ 2.29
NME3-208ENST00000565379 SEMA6BQ9H3T3 888 aa29.33■■■□□ 2.29
NME3-208ENST00000565379 AGO4Q9HCK5 861 aaKnown RBP29.33■■■□□ 2.29
NME3-208ENST00000565379 CIZ1Q9ULV3 898 aaPredicted RBP29.33■■■□□ 2.29
NME3-208ENST00000565379 SCN10AQ9Y5Y9 1956 aa29.32■■■□□ 2.28
NME3-208ENST00000565379 NFASCO94856 1347 aa29.32■■■□□ 2.28
NME3-208ENST00000565379 TLR3O15455 904 aaKnown RBP29.32■■■□□ 2.28
NME3-208ENST00000565379 F13A1P00488 732 aa29.32■■■□□ 2.28
NME3-208ENST00000565379 GH1P01241 217 aa29.32■■■□□ 2.28
NME3-208ENST00000565379 ACRP10323 421 aa29.32■■■□□ 2.28
NME3-208ENST00000565379 DDIT3P35638 169 aa29.32■■■□□ 2.28
NME3-208ENST00000565379 EMID1Q96A84 441 aaPredicted RBP29.32■■■□□ 2.28
NME3-208ENST00000565379 BUD13Q9BRD0 619 aaKnown RBP eCLIP29.32■■■□□ 2.288e-10■□□□□ 9.4
NME3-208ENST00000565379 TBC1D22BQ9NU19 505 aa29.32■■■□□ 2.28
NME3-208ENST00000565379 TRMT13Q9NUP7 481 aaKnown RBP29.32■■■□□ 2.28
NME3-208ENST00000565379 ARP10275 920 aa29.31■■■□□ 2.28
NME3-208ENST00000565379 ATP2B1P20020 1258 aa29.31■■■□□ 2.28
NME3-208ENST00000565379 UBA1P22314 1058 aaKnown RBP29.31■■■□□ 2.28
NME3-208ENST00000565379 CPT1AP50416 773 aa29.31■■■□□ 2.28
NME3-208ENST00000565379 ARHGAP1Q07960 439 aa29.31■■■□□ 2.28
NME3-208ENST00000565379 LAMC2Q13753 1193 aa29.31■■■□□ 2.28
NME3-208ENST00000565379 FAM20AQ96MK3 541 aa29.31■■■□□ 2.28
NME3-208ENST00000565379 SDF4Q9BRK5 362 aa29.31■■■□□ 2.28
NME3-208ENST00000565379 ZNF577Q9BSK1 485 aa29.31■■■□□ 2.28
NME3-208ENST00000565379 POLR3EQ9NVU0 708 aa29.31■■■□□ 2.28
NME3-208ENST00000565379 A6NJR5 290 aa29.3■■■□□ 2.28
NME3-208ENST00000565379 RBAK-RBAKDNI3L0D1 243 aa29.3■■■□□ 2.28
NME3-208ENST00000565379 IPO5O00410 1097 aaKnown RBP29.3■■■□□ 2.28
NME3-208ENST00000565379 NEMFO60524 1076 aa29.3■■■□□ 2.28
NME3-208ENST00000565379 BAG4O95429 457 aaKnown RBP29.3■■■□□ 2.28
NME3-208ENST00000565379 KCNA2P16389 499 aa29.3■■■□□ 2.28
NME3-208ENST00000565379 TOB1P50616 345 aaPredicted RBP29.3■■■□□ 2.28
NME3-208ENST00000565379 CELF3Q5SZQ8 465 aaKnown RBP29.3■■■□□ 2.28
NME3-208ENST00000565379 DHX37Q8IY37 1157 aaKnown RBP29.3■■■□□ 2.28
NME3-208ENST00000565379 SLFN12Q8IYM2 578 aa29.3■■■□□ 2.28
NME3-208ENST00000565379 AFG1LQ8WV93 481 aa29.3■■■□□ 2.28
NME3-208ENST00000565379 RIT2Q99578 217 aa29.3■■■□□ 2.28
NME3-208ENST00000565379 CDX2Q99626 313 aaPredicted RBP29.3■■■□□ 2.28
NME3-208ENST00000565379 MTG1Q9BT17 334 aaPredicted RBP29.3■■■□□ 2.28
NME3-208ENST00000565379 NOC4LQ9BVI4 516 aaKnown RBP29.3■■■□□ 2.28
NME3-208ENST00000565379 ATP6V1DQ9Y5K8 247 aa29.3■■■□□ 2.28
NME3-208ENST00000565379 MSH4O15457 936 aa29.29■■■□□ 2.28
NME3-208ENST00000565379 SORBS3O60504 671 aa29.29■■■□□ 2.28
NME3-208ENST00000565379 BMP15O95972 392 aa29.29■■■□□ 2.28
NME3-208ENST00000565379 BRDTQ58F21 947 aaPredicted RBP29.29■■■□□ 2.28
NME3-208ENST00000565379 METTL7BQ6UX53 244 aa29.29■■■□□ 2.28
NME3-208ENST00000565379 WNT8AQ9H1J5 351 aa29.29■■■□□ 2.28
NME3-208ENST00000565379 HIPK3Q9H422 1215 aa29.29■■■□□ 2.28
NME3-208ENST00000565379 MLXIPQ9HAP2 919 aa29.29■■■□□ 2.28
NME3-208ENST00000565379 LAD1O00515 517 aa29.28■■■□□ 2.28
NME3-208ENST00000565379 SLC37A4O43826 429 aa29.28■■■□□ 2.28
NME3-208ENST00000565379 MARCH6O60337 910 aa29.28■■■□□ 2.28
NME3-208ENST00000565379 GGPS1O95749 300 aa29.28■■■□□ 2.28
NME3-208ENST00000565379 CYP2C9P11712 490 aa29.28■■■□□ 2.28
NME3-208ENST00000565379 CCL23P55773 120 aa29.28■■■□□ 2.28
NME3-208ENST00000565379 SP2Q02086 613 aa29.28■■■□□ 2.28
NME3-208ENST00000565379 PKP1Q13835 747 aa29.28■■■□□ 2.28
NME3-208ENST00000565379 NBPF20Q3BBV1 942 aa29.28■■■□□ 2.28
NME3-208ENST00000565379 TMEM240Q5SV17 173 aa29.28■■■□□ 2.28
NME3-208ENST00000565379 KCNMB3Q9NPA1 279 aa29.28■■■□□ 2.28
NME3-208ENST00000565379 EIF4ENIF1Q9NRA8 985 aaKnown RBP29.28■■■□□ 2.28
NME3-208ENST00000565379 TCEAL9Q9UHQ7 104 aa29.28■■■□□ 2.28
NME3-208ENST00000565379 CEP131Q9UPN4 1083 aa29.28■■■□□ 2.28
NME3-208ENST00000565379 CDH23Q9H251 3354 aa29.27■■■□□ 2.28
NME3-208ENST00000565379 ATP9AO75110 1047 aa29.27■■■□□ 2.28
NME3-208ENST00000565379 MCM7P33993 719 aa29.27■■■□□ 2.28
NME3-208ENST00000565379 ZNF174Q15697 407 aa29.27■■■□□ 2.28
NME3-208ENST00000565379 CALCRLQ16602 461 aa29.27■■■□□ 2.28
NME3-208ENST00000565379 ATL3Q6DD88 541 aa29.27■■■□□ 2.28
NME3-208ENST00000565379 PHF6Q8IWS0 365 aaKnown RBP eCLIP29.27■■■□□ 2.28
NME3-208ENST00000565379 ETNPPLQ8TBG4 499 aa29.27■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms