RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 CHRNA1P02708 482 aa9.87□□□□□ -0.83
CAPN3-213ENST00000565173 AMHP03971 560 aa9.87□□□□□ -0.83
CAPN3-213ENST00000565173 CTSHP09668 335 aa9.87□□□□□ -0.83
CAPN3-213ENST00000565173 GNAT1P11488 350 aa9.87□□□□□ -0.83
CAPN3-213ENST00000565173 TCF7P36402 384 aaPredicted RBP9.87□□□□□ -0.83
CAPN3-213ENST00000565173 ARHGAP4P98171 946 aa9.87□□□□□ -0.83
CAPN3-213ENST00000565173 SP4Q02446 784 aa9.87□□□□□ -0.83
CAPN3-213ENST00000565173 UBE2SQ16763 222 aa9.87□□□□□ -0.83
CAPN3-213ENST00000565173 NFXL1Q6ZNB6 911 aa9.87□□□□□ -0.83
CAPN3-213ENST00000565173 RUFY4Q6ZNE9 571 aa9.87□□□□□ -0.83
CAPN3-213ENST00000565173 TMTC3Q6ZXV5 915 aa9.87□□□□□ -0.83
CAPN3-213ENST00000565173 NLRX1Q86UT6 975 aa9.87□□□□□ -0.83
CAPN3-213ENST00000565173 RAB11FIP4Q86YS3 637 aa9.87□□□□□ -0.83
CAPN3-213ENST00000565173 MYOCDQ8IZQ8 938 aa9.87□□□□□ -0.83
CAPN3-213ENST00000565173 CCDC82Q8N4S0 544 aa9.87□□□□□ -0.83
CAPN3-213ENST00000565173 FANCBQ8NB91 859 aa9.87□□□□□ -0.83
CAPN3-213ENST00000565173 GIMAP8Q8ND71 665 aaPredicted RBP9.87□□□□□ -0.83
CAPN3-213ENST00000565173 LMBR1Q8WVP7 490 aa9.87□□□□□ -0.83
CAPN3-213ENST00000565173 SEPT8Q92599 483 aa9.87□□□□□ -0.83
CAPN3-213ENST00000565173 GPRASP2Q96D09 838 aa9.87□□□□□ -0.83
CAPN3-213ENST00000565173 LRRC2Q9BYS8 371 aa9.87□□□□□ -0.83
CAPN3-213ENST00000565173 EHMT1Q9H9B1 1298 aa9.87□□□□□ -0.83
CAPN3-213ENST00000565173 RAPGEFL1Q9UHV5 662 aa9.87□□□□□ -0.83
CAPN3-213ENST00000565173 UBIAD1Q9Y5Z9 338 aa9.87□□□□□ -0.83
CAPN3-213ENST00000565173 SIP14410 1827 aa9.86□□□□□ -0.83
CAPN3-213ENST00000565173 NRCAMQ92823 1304 aa9.86□□□□□ -0.83
CAPN3-213ENST00000565173 CALM1P0DP23 149 aa9.86□□□□□ -0.83
CAPN3-213ENST00000565173 CALM2P0DP24 149 aa9.86□□□□□ -0.83
CAPN3-213ENST00000565173 CALM3P0DP25 149 aa9.86□□□□□ -0.83
CAPN3-213ENST00000565173 MGAT3Q09327 533 aa9.86□□□□□ -0.83
CAPN3-213ENST00000565173 EPC2Q52LR7 807 aa9.86□□□□□ -0.83
CAPN3-213ENST00000565173 MARCH8Q5T0T0 291 aa9.86□□□□□ -0.83
CAPN3-213ENST00000565173 SGMS1Q86VZ5 419 aa9.86□□□□□ -0.83
CAPN3-213ENST00000565173 SEPT1Q8WYJ6 367 aa9.86□□□□□ -0.83
CAPN3-213ENST00000565173 CDHR1Q96JP9 859 aa9.86□□□□□ -0.83
CAPN3-213ENST00000565173 PCYT2Q99447 389 aa9.86□□□□□ -0.83
CAPN3-213ENST00000565173 ZNF215Q9UL58 517 aaPredicted RBP9.86□□□□□ -0.83
CAPN3-213ENST00000565173 PCDHA6Q9UN73 950 aa9.86□□□□□ -0.83
CAPN3-213ENST00000565173 PCDHA8Q9Y5H6 950 aa9.86□□□□□ -0.83
CAPN3-213ENST00000565173 SLC12A7Q9Y666 1083 aa9.86□□□□□ -0.83
CAPN3-213ENST00000565173 TRIOO75962 3097 aa9.86□□□□□ -0.83
CAPN3-213ENST00000565173 MBLAC1A4D2B0 266 aaPredicted RBP9.85□□□□□ -0.83
CAPN3-213ENST00000565173 H3BNC9 293 aa9.85□□□□□ -0.83
CAPN3-213ENST00000565173 MAFGO15525 162 aa9.85□□□□□ -0.83
CAPN3-213ENST00000565173 UPP2O95045 317 aa9.85□□□□□ -0.83
CAPN3-213ENST00000565173 LINC00271P0C7V0 271 aa9.85□□□□□ -0.83
CAPN3-213ENST00000565173 MARK3P27448 753 aa9.85□□□□□ -0.83
CAPN3-213ENST00000565173 EXOSC10Q01780 885 aaKnown RBP9.85□□□□□ -0.83
CAPN3-213ENST00000565173 FUT2Q10981 343 aa9.85□□□□□ -0.83
CAPN3-213ENST00000565173 MTMR1Q13613 665 aa9.85□□□□□ -0.83
CAPN3-213ENST00000565173 TYW1BQ6NUM6 668 aa9.85□□□□□ -0.83
CAPN3-213ENST00000565173 SKAP1Q86WV1 359 aa9.85□□□□□ -0.83
CAPN3-213ENST00000565173 FBXO22Q8NEZ5 403 aa9.85□□□□□ -0.83
CAPN3-213ENST00000565173 CYP2W1Q8TAV3 490 aa9.85□□□□□ -0.83
CAPN3-213ENST00000565173 APBB2Q92870 758 aa9.85□□□□□ -0.83
CAPN3-213ENST00000565173 KHSRPQ92945 711 aaKnown RBP eCLIP9.85□□□□□ -0.83
CAPN3-213ENST00000565173 MRPL38Q96DV4 380 aaKnown RBP9.85□□□□□ -0.83
CAPN3-213ENST00000565173 IFIH1Q9BYX4 1025 aaKnown RBP9.85□□□□□ -0.83
CAPN3-213ENST00000565173 EPHX3Q9H6B9 360 aa9.85□□□□□ -0.83
CAPN3-213ENST00000565173 CD320Q9NPF0 282 aa9.85□□□□□ -0.83
CAPN3-213ENST00000565173 JADE2Q9NQC1 790 aa9.85□□□□□ -0.83
CAPN3-213ENST00000565173 BRPF3Q9ULD4 1205 aa9.85□□□□□ -0.83
CAPN3-213ENST00000565173 BRWD1Q9NSI6 2320 aa9.84□□□□□ -0.83
CAPN3-213ENST00000565173 COL4A6Q14031 1691 aa9.84□□□□□ -0.83
CAPN3-213ENST00000565173 ENPP3O14638 875 aa9.84□□□□□ -0.83
CAPN3-213ENST00000565173 GHRP10912 638 aa9.84□□□□□ -0.83
CAPN3-213ENST00000565173 PPFIA1Q13136 1202 aa9.84□□□□□ -0.83
CAPN3-213ENST00000565173 LPIN1Q14693 890 aa9.84□□□□□ -0.83
CAPN3-213ENST00000565173 GRIK4Q16099 956 aa9.84□□□□□ -0.83
CAPN3-213ENST00000565173 LEXMQ3ZCV2 418 aa9.84□□□□□ -0.83
CAPN3-213ENST00000565173 WWC2Q6AWC2 1192 aa9.84□□□□□ -0.83
CAPN3-213ENST00000565173 TAF2Q6P1X5 1199 aa9.84□□□□□ -0.83
CAPN3-213ENST00000565173 APOA5Q6Q788 366 aa9.84□□□□□ -0.83
CAPN3-213ENST00000565173 HEATR3Q7Z4Q2 680 aa9.84□□□□□ -0.83
CAPN3-213ENST00000565173 MICU3Q86XE3 530 aa9.84□□□□□ -0.83
CAPN3-213ENST00000565173 TMEM192Q8IY95 271 aa9.84□□□□□ -0.83
CAPN3-213ENST00000565173 RASEFQ8IZ41 740 aa9.84□□□□□ -0.83
CAPN3-213ENST00000565173 CRIPAKQ8N1N5 446 aa9.84□□□□□ -0.83
CAPN3-213ENST00000565173 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.84□□□□□ -0.83
CAPN3-213ENST00000565173 DNAJB3Q8WWF6 145 aa9.84□□□□□ -0.83
CAPN3-213ENST00000565173 ZBTB10Q96DT7 871 aa9.84□□□□□ -0.83
CAPN3-213ENST00000565173 SAMD11Q96NU1 681 aa9.84□□□□□ -0.83
CAPN3-213ENST00000565173 YME1L1Q96TA2 773 aa9.84□□□□□ -0.83
CAPN3-213ENST00000565173 SMARCAD1Q9H4L7 1026 aa9.84□□□□□ -0.83
CAPN3-213ENST00000565173 UBE2ZQ9H832 354 aaPredicted RBP9.84□□□□□ -0.83
CAPN3-213ENST00000565173 RC3H2Q9HBD1 1191 aaKnown RBP9.84□□□□□ -0.83
CAPN3-213ENST00000565173 ANO2Q9NQ90 1003 aa9.84□□□□□ -0.83
CAPN3-213ENST00000565173 KCNH7Q9NS40 1196 aa9.84□□□□□ -0.83
CAPN3-213ENST00000565173 FAM217BQ9NTX9 383 aaPredicted RBP9.84□□□□□ -0.83
CAPN3-213ENST00000565173 ERAP1Q9NZ08 941 aa9.84□□□□□ -0.83
CAPN3-213ENST00000565173 PKD2L1Q9P0L9 805 aa9.84□□□□□ -0.83
CAPN3-213ENST00000565173 CNTNAP5Q8WYK1 1306 aa9.83□□□□□ -0.84
CAPN3-213ENST00000565173 SPDYE3A6NKU9 549 aa9.83□□□□□ -0.84
CAPN3-213ENST00000565173 ARP10275 920 aa9.83□□□□□ -0.84
CAPN3-213ENST00000565173 INSRRP14616 1297 aa9.83□□□□□ -0.84
CAPN3-213ENST00000565173 COL19A1Q14993 1142 aa9.83□□□□□ -0.84
CAPN3-213ENST00000565173 ADCK5Q3MIX3 580 aa9.83□□□□□ -0.84
CAPN3-213ENST00000565173 TSGA10IPQ3SY00 556 aa9.83□□□□□ -0.84
CAPN3-213ENST00000565173 BMP2KLQ5H9B9 411 aa9.83□□□□□ -0.84
CAPN3-213ENST00000565173 FBXO47Q5MNV8 452 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms