RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 GRIN1Q05586 938 aa6.77□□□□□ -1.33
CHD9-212ENST00000564641 RASGRF1Q13972 1273 aa6.77□□□□□ -1.33
CHD9-212ENST00000564641 SMAD2Q15796 467 aaKnown RBP6.77□□□□□ -1.33
CHD9-212ENST00000564641 KCTD1Q719H9 257 aa6.77□□□□□ -1.33
CHD9-212ENST00000564641 PROSER1Q86XN7 944 aa6.77□□□□□ -1.33
CHD9-212ENST00000564641 NLGN4XQ8N0W4 816 aa6.77□□□□□ -1.33
CHD9-212ENST00000564641 DVL3Q92997 716 aaPredicted RBP6.77□□□□□ -1.33
CHD9-212ENST00000564641 C8orf49Q96NF6 230 aa6.77□□□□□ -1.33
CHD9-212ENST00000564641 KCNJ15Q99712 375 aa6.77□□□□□ -1.33
CHD9-212ENST00000564641 CCDC113Q9H0I3 377 aa6.77□□□□□ -1.33
CHD9-212ENST00000564641 ADAM29Q9UKF5 820 aa6.77□□□□□ -1.33
CHD9-212ENST00000564641 COL6A2P12110 1019 aa6.76□□□□□ -1.33
CHD9-212ENST00000564641 PUM1Q14671 1186 aaKnown RBP eCLIP6.76□□□□□ -1.33
CHD9-212ENST00000564641 SLFN13Q68D06 897 aa6.76□□□□□ -1.33
CHD9-212ENST00000564641 PTPRN2Q92932 1015 aa6.76□□□□□ -1.33
CHD9-212ENST00000564641 CDC6Q99741 560 aa6.76□□□□□ -1.33
CHD9-212ENST00000564641 PPP1R1BQ9UD71 204 aaPredicted RBP6.76□□□□□ -1.33
CHD9-212ENST00000564641 WASF3Q9UPY6 502 aa6.76□□□□□ -1.33
CHD9-212ENST00000564641 WNT9AO14904 365 aa6.75□□□□□ -1.33
CHD9-212ENST00000564641 NKRFO15226 690 aaKnown RBP eCLIP6.75□□□□□ -1.33
CHD9-212ENST00000564641 CKMP06732 381 aa6.75□□□□□ -1.33
CHD9-212ENST00000564641 COL6A1P12109 1028 aa6.75□□□□□ -1.33
CHD9-212ENST00000564641 ZNF20P17024 532 aa6.75□□□□□ -1.33
CHD9-212ENST00000564641 SUMO1P63165 101 aaKnown RBP6.75□□□□□ -1.33
CHD9-212ENST00000564641 PAK1Q13153 545 aa6.75□□□□□ -1.33
CHD9-212ENST00000564641 LONRF2Q1L5Z9 754 aa6.75□□□□□ -1.33
CHD9-212ENST00000564641 MTERF2Q49AM1 385 aa6.75□□□□□ -1.33
CHD9-212ENST00000564641 YOD1Q5VVQ6 348 aaPredicted RBP6.75□□□□□ -1.33
CHD9-212ENST00000564641 CD276Q5ZPR3 534 aa6.75□□□□□ -1.33
CHD9-212ENST00000564641 CIR1Q86X95 450 aaPredicted RBP6.75□□□□□ -1.33
CHD9-212ENST00000564641 CDK5RAP1Q96SZ6 601 aaKnown RBP6.75□□□□□ -1.33
CHD9-212ENST00000564641 JADE2Q9NQC1 790 aa6.75□□□□□ -1.33
CHD9-212ENST00000564641 PPP4R1LQ9P1A2 415 aa6.75□□□□□ -1.33
CHD9-212ENST00000564641 ARHGAP20Q9P2F6 1191 aa6.75□□□□□ -1.33
CHD9-212ENST00000564641 ZDHHC9Q9Y397 364 aa6.75□□□□□ -1.33
CHD9-212ENST00000564641 GSTA4O15217 222 aa6.74□□□□□ -1.33
CHD9-212ENST00000564641 KLHL18O94889 574 aa6.74□□□□□ -1.33
CHD9-212ENST00000564641 KNG1P01042 644 aa6.74□□□□□ -1.33
CHD9-212ENST00000564641 APPP05067 770 aa6.74□□□□□ -1.33
CHD9-212ENST00000564641 ATP2B1P20020 1258 aa6.74□□□□□ -1.33
CHD9-212ENST00000564641 SKIDA1Q1XH10 827 aa6.74□□□□□ -1.33
CHD9-212ENST00000564641 NAALADL2Q58DX5 795 aa6.74□□□□□ -1.33
CHD9-212ENST00000564641 ZC3H12BQ5HYM0 836 aaKnown RBP6.74□□□□□ -1.33
CHD9-212ENST00000564641 Q6ZUG5 572 aa6.74□□□□□ -1.33
CHD9-212ENST00000564641 LIMS2Q7Z4I7 341 aa6.74□□□□□ -1.33
CHD9-212ENST00000564641 REXO1L1PQ8IX06 675 aa6.74□□□□□ -1.33
CHD9-212ENST00000564641 ZBTB38Q8NAP3 1195 aaPredicted RBP6.74□□□□□ -1.33
CHD9-212ENST00000564641 IGDCC4Q8TDY8 1250 aa6.74□□□□□ -1.33
CHD9-212ENST00000564641 KISS1RQ969F8 398 aaPredicted RBP6.74□□□□□ -1.33
CHD9-212ENST00000564641 HIRIP3Q9BW71 556 aaPredicted RBP6.74□□□□□ -1.33
CHD9-212ENST00000564641 KRTAP3-1Q9BYR8 98 aa6.74□□□□□ -1.33
CHD9-212ENST00000564641 IPPKQ9H8X2 491 aa6.74□□□□□ -1.33
CHD9-212ENST00000564641 SIRPGQ9P1W8 387 aa6.74□□□□□ -1.33
CHD9-212ENST00000564641 TRBV23-1A0A0A0MS06 115 aa6.73□□□□□ -1.33
CHD9-212ENST00000564641 BLACEA4D250 179 aa6.73□□□□□ -1.33
CHD9-212ENST00000564641 ZNF839A8K0R7 811 aa6.73□□□□□ -1.33
CHD9-212ENST00000564641 B4GALT4O60513 344 aa6.73□□□□□ -1.33
CHD9-212ENST00000564641 PFKPQ01813 784 aa6.73□□□□□ -1.33
CHD9-212ENST00000564641 RALYLQ86SE5 291 aaKnown RBP6.73□□□□□ -1.33
CHD9-212ENST00000564641 IFNL2Q8IZJ0 200 aa6.73□□□□□ -1.33
CHD9-212ENST00000564641 ARMC5Q96C12 935 aa6.73□□□□□ -1.33
CHD9-212ENST00000564641 AJUBAQ96IF1 538 aa6.73□□□□□ -1.33
CHD9-212ENST00000564641 RBPJLQ9UBG7 517 aa6.73□□□□□ -1.33
CHD9-212ENST00000564641 ZFP69BQ9UJL9 534 aa6.73□□□□□ -1.33
CHD9-212ENST00000564641 ADCY3O60266 1144 aa6.72□□□□□ -1.33
CHD9-212ENST00000564641 LTFP02788 710 aa6.72□□□□□ -1.33
CHD9-212ENST00000564641 GJA4P35212 333 aa6.72□□□□□ -1.33
CHD9-212ENST00000564641 GABREP78334 506 aa6.72□□□□□ -1.33
CHD9-212ENST00000564641 SSRP1Q08945 709 aaKnown RBP6.72□□□□□ -1.33
CHD9-212ENST00000564641 GPR19Q15760 415 aa6.72□□□□□ -1.33
CHD9-212ENST00000564641 DPP8Q6V1X1 898 aaPredicted RBP6.72□□□□□ -1.33
CHD9-212ENST00000564641 EP400NLQ6ZTU2 488 aa6.72□□□□□ -1.33
CHD9-212ENST00000564641 SPATC1Q76KD6 591 aa6.72□□□□□ -1.33
CHD9-212ENST00000564641 LRP10Q7Z4F1 713 aa6.72□□□□□ -1.33
CHD9-212ENST00000564641 MTDHQ86UE4 582 aaKnown RBP6.72□□□□□ -1.33
CHD9-212ENST00000564641 RBM12BQ8IXT5 1001 aaKnown RBP6.72□□□□□ -1.33
CHD9-212ENST00000564641 NUDT10Q8NFP7 164 aa6.72□□□□□ -1.33
CHD9-212ENST00000564641 FBXW5Q969U6 566 aa6.72□□□□□ -1.33
CHD9-212ENST00000564641 NUDT11Q96G61 164 aa6.72□□□□□ -1.33
CHD9-212ENST00000564641 TANGO6Q9C0B7 1094 aa6.72□□□□□ -1.33
CHD9-212ENST00000564641 SEMA4AQ9H3S1 761 aa6.72□□□□□ -1.33
CHD9-212ENST00000564641 TMPRSS5Q9H3S3 457 aa6.72□□□□□ -1.33
CHD9-212ENST00000564641 SEC61A2Q9H9S3 476 aa6.72□□□□□ -1.33
CHD9-212ENST00000564641 KCND1Q9NSA2 647 aa6.72□□□□□ -1.33
CHD9-212ENST00000564641 TSC22D4Q9Y3Q8 395 aa6.72□□□□□ -1.33
CHD9-212ENST00000564641 TELO2Q9Y4R8 837 aa6.72□□□□□ -1.33
CHD9-212ENST00000564641 ASXL2Q76L83 1435 aa6.71□□□□□ -1.34
CHD9-212ENST00000564641 H0Y858 1186 aa6.71□□□□□ -1.34
CHD9-212ENST00000564641 CUTAO60888 179 aa6.71□□□□□ -1.34
CHD9-212ENST00000564641 TNFRSF1AP19438 455 aa6.71□□□□□ -1.34
CHD9-212ENST00000564641 DNERQ8NFT8 737 aa6.71□□□□□ -1.34
CHD9-212ENST00000564641 KATNBL1Q9H079 304 aa6.71□□□□□ -1.34
CHD9-212ENST00000564641 SRPK3Q9UPE1 567 aa6.71□□□□□ -1.34
CHD9-212ENST00000564641 TRAF6Q9Y4K3 522 aa6.71□□□□□ -1.34
CHD9-212ENST00000564641 GLRBP48167 497 aa6.7□□□□□ -1.34
CHD9-212ENST00000564641 ST5P78524 1137 aa6.7□□□□□ -1.34
CHD9-212ENST00000564641 DBPQ10586 325 aaPredicted RBP6.7□□□□□ -1.34
CHD9-212ENST00000564641 FAM47CQ5HY64 1035 aa6.7□□□□□ -1.34
CHD9-212ENST00000564641 FIGNQ5HY92 759 aa6.7□□□□□ -1.34
CHD9-212ENST00000564641 BTBD8Q5XKL5 378 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms