RNA–Protein interactions for RNA: ENST00000564581.1

SUB1P3-201, Transcript of SUB1 homolog, transcriptional regulator pseudogene 3, humanhuman

BASIC

Gene SUB1P3, Length 315 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1P3-201ENST00000564581 CYP4F22Q6NT55 531 aa4.01□□□□□ -1.77
SUB1P3-201ENST00000564581 PKN3Q6P5Z2 889 aa4.01□□□□□ -1.77
SUB1P3-201ENST00000564581 RSPO2Q6UXX9 243 aaPredicted RBP4.01□□□□□ -1.77
SUB1P3-201ENST00000564581 TRIM48Q8IWZ4 208 aa4.01□□□□□ -1.77
SUB1P3-201ENST00000564581 PALM2Q8IXS6 379 aa4.01□□□□□ -1.77
SUB1P3-201ENST00000564581 IFNL3Q8IZI9 196 aa4.01□□□□□ -1.77
SUB1P3-201ENST00000564581 KLHL36Q8N4N3 616 aa4.01□□□□□ -1.77
SUB1P3-201ENST00000564581 TTC9BQ8N6N2 239 aa4.01□□□□□ -1.77
SUB1P3-201ENST00000564581 SLC43A3Q8NBI5 491 aa4.01□□□□□ -1.77
SUB1P3-201ENST00000564581 UHMK1Q8TAS1 419 aaKnown RBP4.01□□□□□ -1.77
SUB1P3-201ENST00000564581 SH3RF2Q8TEC5 729 aa4.01□□□□□ -1.77
SUB1P3-201ENST00000564581 DVL3Q92997 716 aaPredicted RBP4.01□□□□□ -1.77
SUB1P3-201ENST00000564581 TACO1Q9BSH4 297 aaKnown RBP4.01□□□□□ -1.77
SUB1P3-201ENST00000564581 CD248Q9HCU0 757 aa4.01□□□□□ -1.77
SUB1P3-201ENST00000564581 DLL4Q9NR61 685 aa4.01□□□□□ -1.77
SUB1P3-201ENST00000564581 HSPBP1Q9NZL4 362 aa4.01□□□□□ -1.77
SUB1P3-201ENST00000564581 PFDN2Q9UHV9 154 aa4.01□□□□□ -1.77
SUB1P3-201ENST00000564581 DSEQ9UL01 958 aa4.01□□□□□ -1.77
SUB1P3-201ENST00000564581 PTPN22Q9Y2R2 807 aa4.01□□□□□ -1.77
SUB1P3-201ENST00000564581 CCDC180Q9P1Z9 1646 aa4□□□□□ -1.77
SUB1P3-201ENST00000564581 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4□□□□□ -1.77
SUB1P3-201ENST00000564581 CCDC85CA6NKD9 419 aa4□□□□□ -1.77
SUB1P3-201ENST00000564581 CYP7B1O75881 506 aa4□□□□□ -1.77
SUB1P3-201ENST00000564581 KNG1P01042 644 aa4□□□□□ -1.77
SUB1P3-201ENST00000564581 EPHB4P54760 987 aa4□□□□□ -1.77
SUB1P3-201ENST00000564581 GPR85P60893 370 aa4□□□□□ -1.77
SUB1P3-201ENST00000564581 SPIRE1Q08AE8 756 aa4□□□□□ -1.77
SUB1P3-201ENST00000564581 SMAD2Q15796 467 aaKnown RBP4□□□□□ -1.77
SUB1P3-201ENST00000564581 KIZQ2M2Z5 673 aa4□□□□□ -1.77
SUB1P3-201ENST00000564581 HABP4Q5JVS0 413 aaKnown RBP4□□□□□ -1.77
SUB1P3-201ENST00000564581 STYK1Q6J9G0 422 aa4□□□□□ -1.77
SUB1P3-201ENST00000564581 PNPLA5Q7Z6Z6 429 aaPredicted RBP4□□□□□ -1.77
SUB1P3-201ENST00000564581 PLEKHH3Q7Z736 793 aa4□□□□□ -1.77
SUB1P3-201ENST00000564581 CIR1Q86X95 450 aaPredicted RBP4□□□□□ -1.77
SUB1P3-201ENST00000564581 TTLL11Q8NHH1 800 aa4□□□□□ -1.77
SUB1P3-201ENST00000564581 WWC2-AS2Q96NR7 200 aa4□□□□□ -1.77
SUB1P3-201ENST00000564581 GNRHR2Q96P88 292 aa4□□□□□ -1.77
SUB1P3-201ENST00000564581 MEGF9Q9H1U4 602 aa4□□□□□ -1.77
SUB1P3-201ENST00000564581 BARX1Q9HBU1 254 aaPredicted RBP4□□□□□ -1.77
SUB1P3-201ENST00000564581 SLC39A2Q9NP94 309 aa4□□□□□ -1.77
SUB1P3-201ENST00000564581 ARHGAP20Q9P2F6 1191 aa4□□□□□ -1.77
SUB1P3-201ENST00000564581 ADAM29Q9UKF5 820 aa4□□□□□ -1.77
SUB1P3-201ENST00000564581 CCDC9Q9Y3X0 531 aaKnown RBP4□□□□□ -1.77
SUB1P3-201ENST00000564581 IQCA1LA6NCM1 817 aa3.99□□□□□ -1.77
SUB1P3-201ENST00000564581 C1QTNF3-AMACRE9PGA6 284 aa3.99□□□□□ -1.77
SUB1P3-201ENST00000564581 KCNK3O14649 394 aa3.99□□□□□ -1.77
SUB1P3-201ENST00000564581 FBXO21O94952 628 aa3.99□□□□□ -1.77
SUB1P3-201ENST00000564581 CNOT4O95628 575 aaKnown RBP3.99□□□□□ -1.77
SUB1P3-201ENST00000564581 ENO2P09104 434 aaPredicted RBP3.99□□□□□ -1.77
SUB1P3-201ENST00000564581 NOLC1Q14978 699 aaKnown RBP eCLIP3.99□□□□□ -1.77
SUB1P3-201ENST00000564581 SURF1Q15526 300 aa3.99□□□□□ -1.77
SUB1P3-201ENST00000564581 FAM209AQ5JX71 171 aa3.99□□□□□ -1.77
SUB1P3-201ENST00000564581 Q6ZUG5 572 aa3.99□□□□□ -1.77
SUB1P3-201ENST00000564581 KCTD1Q719H9 257 aa3.99□□□□□ -1.77
SUB1P3-201ENST00000564581 SLC16A11Q8NCK7 471 aa3.99□□□□□ -1.77
SUB1P3-201ENST00000564581 ST13P5Q8NFI4 369 aaPredicted RBP3.99□□□□□ -1.77
SUB1P3-201ENST00000564581 WRNIP1Q96S55 665 aa3.99□□□□□ -1.77
SUB1P3-201ENST00000564581 SPATA9Q9BWV2 254 aa3.99□□□□□ -1.77
SUB1P3-201ENST00000564581 SCAND2PQ9GZW5 306 aaPredicted RBP3.99□□□□□ -1.77
SUB1P3-201ENST00000564581 KLC2Q9H0B6 622 aa3.99□□□□□ -1.77
SUB1P3-201ENST00000564581 KCND1Q9NSA2 647 aa3.99□□□□□ -1.77
SUB1P3-201ENST00000564581 PCDHA8Q9Y5H6 950 aa3.99□□□□□ -1.77
SUB1P3-201ENST00000564581 RB1CC1Q8TDY2 1594 aa3.98□□□□□ -1.77
SUB1P3-201ENST00000564581 FAM90A27PA6NNH2 459 aa3.98□□□□□ -1.77
SUB1P3-201ENST00000564581 ZNF839A8K0R7 811 aa3.98□□□□□ -1.77
SUB1P3-201ENST00000564581 FAM47E-STBD1D6RA91 191 aa3.98□□□□□ -1.77
SUB1P3-201ENST00000564581 ADCY3O60266 1144 aa3.98□□□□□ -1.77
SUB1P3-201ENST00000564581 DIAPH1O60610 1272 aaKnown RBP3.98□□□□□ -1.77
SUB1P3-201ENST00000564581 ZNF888P0CJ79 500 aaPredicted RBP3.98□□□□□ -1.77
SUB1P3-201ENST00000564581 SRGAP2CP0DJJ0 459 aa3.98□□□□□ -1.77
SUB1P3-201ENST00000564581 CSF2RBP32927 897 aa3.98□□□□□ -1.77
SUB1P3-201ENST00000564581 EPHA5P54756 1037 aa3.98□□□□□ -1.77
SUB1P3-201ENST00000564581 BTBD8Q5XKL5 378 aa3.98□□□□□ -1.77
SUB1P3-201ENST00000564581 SLFN13Q68D06 897 aa3.98□□□□□ -1.77
SUB1P3-201ENST00000564581 OSTM1Q86WC4 334 aa3.98□□□□□ -1.77
SUB1P3-201ENST00000564581 LRRC47Q8N1G4 583 aaKnown RBP3.98□□□□□ -1.77
SUB1P3-201ENST00000564581 Q8N1X5 172 aa3.98□□□□□ -1.77
SUB1P3-201ENST00000564581 DNERQ8NFT8 737 aa3.98□□□□□ -1.77
SUB1P3-201ENST00000564581 PUM2Q8TB72 1066 aaKnown RBP eCLIP3.98□□□□□ -1.77
SUB1P3-201ENST00000564581 KISS1RQ969F8 398 aaPredicted RBP3.98□□□□□ -1.77
SUB1P3-201ENST00000564581 LRRC37BQ96QE4 947 aa3.98□□□□□ -1.77
SUB1P3-201ENST00000564581 ZFYVE21Q9BQ24 234 aa3.98□□□□□ -1.77
SUB1P3-201ENST00000564581 TRIM55Q9BYV6 548 aa3.98□□□□□ -1.77
SUB1P3-201ENST00000564581 DEF6Q9H4E7 631 aa3.98□□□□□ -1.77
SUB1P3-201ENST00000564581 IGSF5Q9NSI5 407 aa3.98□□□□□ -1.77
SUB1P3-201ENST00000564581 PATE3B3GLJ2 98 aa3.97□□□□□ -1.77
SUB1P3-201ENST00000564581 FOXS1O43638 330 aa3.97□□□□□ -1.77
SUB1P3-201ENST00000564581 ZNF623O75123 536 aa3.97□□□□□ -1.77
SUB1P3-201ENST00000564581 STK10O94804 968 aaKnown RBP3.97□□□□□ -1.77
SUB1P3-201ENST00000564581 AMHP03971 560 aa3.97□□□□□ -1.77
SUB1P3-201ENST00000564581 AMY2AP04746 511 aa3.97□□□□□ -1.77
SUB1P3-201ENST00000564581 C6orf222P0C671 652 aaPredicted RBP3.97□□□□□ -1.77
SUB1P3-201ENST00000564581 PYGMP11217 842 aa3.97□□□□□ -1.77
SUB1P3-201ENST00000564581 C6P13671 934 aa3.97□□□□□ -1.77
SUB1P3-201ENST00000564581 KRT15P19012 456 aa3.97□□□□□ -1.77
SUB1P3-201ENST00000564581 AMY2BP19961 511 aa3.97□□□□□ -1.77
SUB1P3-201ENST00000564581 ARHGAP36Q6ZRI8 547 aa3.97□□□□□ -1.77
SUB1P3-201ENST00000564581 RALYLQ86SE5 291 aaKnown RBP3.97□□□□□ -1.77
SUB1P3-201ENST00000564581 Q8TCH9 128 aa3.97□□□□□ -1.77
SUB1P3-201ENST00000564581 AJUBAQ96IF1 538 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms