RNA–Protein interactions for RNA: ENST00000564342.5

NSMCE1-207, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-207ENST00000564342 CRYGNQ8WXF5 182 aa9.4□□□□□ -0.9
NSMCE1-207ENST00000564342 VWCEQ96DN2 955 aa9.4□□□□□ -0.9
NSMCE1-207ENST00000564342 SCLYQ96I15 445 aa9.4□□□□□ -0.9
NSMCE1-207ENST00000564342 MXRA8Q9BRK3 442 aa9.4□□□□□ -0.9
NSMCE1-207ENST00000564342 C6orf50Q9HD87 102 aa9.4□□□□□ -0.9
NSMCE1-207ENST00000564342 IL23AQ9NPF7 189 aa9.4□□□□□ -0.9
NSMCE1-207ENST00000564342 VPS54Q9P1Q0 977 aa9.4□□□□□ -0.9
NSMCE1-207ENST00000564342 GTF2IRD1Q9UHL9 959 aa9.4□□□□□ -0.9
NSMCE1-207ENST00000564342 TPCN1Q9ULQ1 816 aa9.4□□□□□ -0.9
NSMCE1-207ENST00000564342 GSTTP1A0A1W2PQM5 241 aa9.39□□□□□ -0.91
NSMCE1-207ENST00000564342 H3BRB1 525 aa9.39□□□□□ -0.91
NSMCE1-207ENST00000564342 NOP56O00567 594 aaKnown RBP9.39□□□□□ -0.91
NSMCE1-207ENST00000564342 CPLX1O14810 134 aa9.39□□□□□ -0.91
NSMCE1-207ENST00000564342 MAFGO15525 162 aa9.39□□□□□ -0.91
NSMCE1-207ENST00000564342 PFKFB2O60825 505 aa9.39□□□□□ -0.91
NSMCE1-207ENST00000564342 ARP10275 920 aa9.39□□□□□ -0.91
NSMCE1-207ENST00000564342 GNA11P29992 359 aa9.39□□□□□ -0.91
NSMCE1-207ENST00000564342 ARHGAP4P98171 946 aa9.39□□□□□ -0.91
NSMCE1-207ENST00000564342 SP4Q02446 784 aa9.39□□□□□ -0.91
NSMCE1-207ENST00000564342 SSRP1Q08945 709 aaKnown RBP9.39□□□□□ -0.91
NSMCE1-207ENST00000564342 PTGISQ16647 500 aa9.39□□□□□ -0.91
NSMCE1-207ENST00000564342 CEP55Q53EZ4 464 aa9.39□□□□□ -0.91
NSMCE1-207ENST00000564342 RASIP1Q5U651 963 aa9.39□□□□□ -0.91
NSMCE1-207ENST00000564342 MCTP2Q6DN12 878 aa9.39□□□□□ -0.91
NSMCE1-207ENST00000564342 GPR153Q6NV75 609 aa9.39□□□□□ -0.91
NSMCE1-207ENST00000564342 PSRC1Q6PGN9 363 aaPredicted RBP9.39□□□□□ -0.91
NSMCE1-207ENST00000564342 ZNF365Q70YC5 407 aa9.39□□□□□ -0.91
NSMCE1-207ENST00000564342 TRIM22Q8IYM9 498 aa9.39□□□□□ -0.91
NSMCE1-207ENST00000564342 REXO1Q8N1G1 1221 aaKnown RBP9.39□□□□□ -0.91
NSMCE1-207ENST00000564342 C7orf31Q8N865 590 aa9.39□□□□□ -0.91
NSMCE1-207ENST00000564342 CCDC148Q8NFR7 591 aa9.39□□□□□ -0.91
NSMCE1-207ENST00000564342 DHX38Q92620 1227 aaKnown RBP9.39□□□□□ -0.91
NSMCE1-207ENST00000564342 RNPC3Q96LT9 517 aaKnown RBP9.39□□□□□ -0.91
NSMCE1-207ENST00000564342 TUT1Q9H6E5 874 aaKnown RBP9.39□□□□□ -0.91
NSMCE1-207ENST00000564342 KCNH7Q9NS40 1196 aa9.39□□□□□ -0.91
NSMCE1-207ENST00000564342 PKD2L1Q9P0L9 805 aa9.39□□□□□ -0.91
NSMCE1-207ENST00000564342 HCSTQ9UBK5 93 aa9.39□□□□□ -0.91
NSMCE1-207ENST00000564342 NOD1Q9Y239 953 aa9.39□□□□□ -0.91
NSMCE1-207ENST00000564342 MYH9P35579 1960 aaKnown RBP9.39□□□□□ -0.91
NSMCE1-207ENST00000564342 PTPRSQ13332 1948 aa9.39□□□□□ -0.91
NSMCE1-207ENST00000564342 NFASCO94856 1347 aa9.38□□□□□ -0.91
NSMCE1-207ENST00000564342 IGLV3-22A0A075B6J6 115 aa9.38□□□□□ -0.91
NSMCE1-207ENST00000564342 FAM86B1E9PN63 330 aa9.38□□□□□ -0.91
NSMCE1-207ENST00000564342 MEIS1O00470 390 aa9.38□□□□□ -0.91
NSMCE1-207ENST00000564342 DEXIO95424 95 aa9.38□□□□□ -0.91
NSMCE1-207ENST00000564342 LARGE1O95461 756 aa9.38□□□□□ -0.91
NSMCE1-207ENST00000564342 CYP3A4P08684 503 aa9.38□□□□□ -0.91
NSMCE1-207ENST00000564342 FAM86B2P0C5J1 330 aa9.38□□□□□ -0.91
NSMCE1-207ENST00000564342 IQCF3P0C7M6 154 aa9.38□□□□□ -0.91
NSMCE1-207ENST00000564342 HOXC8P31273 242 aa9.38□□□□□ -0.91
NSMCE1-207ENST00000564342 TCF7P36402 384 aaPredicted RBP9.38□□□□□ -0.91
NSMCE1-207ENST00000564342 ZNF200P98182 395 aaPredicted RBP9.38□□□□□ -0.91
NSMCE1-207ENST00000564342 RBL2Q08999 1139 aa9.38□□□□□ -0.91
NSMCE1-207ENST00000564342 ITGB3BPQ13352 177 aaPredicted RBP9.38□□□□□ -0.91
NSMCE1-207ENST00000564342 BFSP2Q13515 415 aa9.38□□□□□ -0.91
NSMCE1-207ENST00000564342 ANKRD1Q15327 319 aa9.38□□□□□ -0.91
NSMCE1-207ENST00000564342 UTP14CQ5TAP6 766 aaKnown RBP9.38□□□□□ -0.91
NSMCE1-207ENST00000564342 CPLX2Q6PUV4 134 aaKnown RBP9.38□□□□□ -0.91
NSMCE1-207ENST00000564342 NIPA1Q7RTP0 329 aa9.38□□□□□ -0.91
NSMCE1-207ENST00000564342 TRIM50Q86XT4 487 aa9.38□□□□□ -0.91
NSMCE1-207ENST00000564342 RASGRP4Q8TDF6 673 aa9.38□□□□□ -0.91
NSMCE1-207ENST00000564342 AIFM3Q96NN9 605 aa9.38□□□□□ -0.91
NSMCE1-207ENST00000564342 SLKQ9H2G2 1235 aaPredicted RBP9.38□□□□□ -0.91
NSMCE1-207ENST00000564342 AGO4Q9HCK5 861 aaKnown RBP9.38□□□□□ -0.91
NSMCE1-207ENST00000564342 SH3GLB2Q9NR46 395 aa9.38□□□□□ -0.91
NSMCE1-207ENST00000564342 SIP14410 1827 aa9.38□□□□□ -0.91
NSMCE1-207ENST00000564342 STK36Q9NRP7 1315 aa9.37□□□□□ -0.91
NSMCE1-207ENST00000564342 TET1Q8NFU7 2136 aa9.37□□□□□ -0.91
NSMCE1-207ENST00000564342 EDIL3O43854 480 aa9.37□□□□□ -0.91
NSMCE1-207ENST00000564342 DTNBO60941 627 aa9.37□□□□□ -0.91
NSMCE1-207ENST00000564342 CTDNEP1O95476 244 aa9.37□□□□□ -0.91
NSMCE1-207ENST00000564342 SMIM10L2AP0DMW4 78 aa9.37□□□□□ -0.91
NSMCE1-207ENST00000564342 SMIM10L2BP0DMW5 78 aa9.37□□□□□ -0.91
NSMCE1-207ENST00000564342 ZNF76P36508 570 aa9.37□□□□□ -0.91
NSMCE1-207ENST00000564342 NEK4P51957 841 aa9.37□□□□□ -0.91
NSMCE1-207ENST00000564342 NLRP5P59047 1200 aa9.37□□□□□ -0.91
NSMCE1-207ENST00000564342 SMAD3P84022 425 aaKnown RBP9.37□□□□□ -0.91
NSMCE1-207ENST00000564342 PTK7Q13308 1070 aa9.37□□□□□ -0.91
NSMCE1-207ENST00000564342 NPY5RQ15761 445 aa9.37□□□□□ -0.91
NSMCE1-207ENST00000564342 ME3Q16798 604 aa9.37□□□□□ -0.91
NSMCE1-207ENST00000564342 TRIM71Q2Q1W2 868 aaKnown RBP9.37□□□□□ -0.91
NSMCE1-207ENST00000564342 Q7L0L9 218 aa9.37□□□□□ -0.91
NSMCE1-207ENST00000564342 RPUSD2Q8IZ73 545 aaKnown RBP9.37□□□□□ -0.91
NSMCE1-207ENST00000564342 CCDC155Q8N6L0 562 aa9.37□□□□□ -0.91
NSMCE1-207ENST00000564342 RETREG2Q8NC44 543 aa9.37□□□□□ -0.91
NSMCE1-207ENST00000564342 CAGE1Q8TC20 777 aa9.37□□□□□ -0.91
NSMCE1-207ENST00000564342 BICD2Q8TD16 824 aa9.37□□□□□ -0.91
NSMCE1-207ENST00000564342 AFAP1L1Q8TED9 768 aa9.37□□□□□ -0.91
NSMCE1-207ENST00000564342 SEPT1Q8WYJ6 367 aa9.37□□□□□ -0.91
NSMCE1-207ENST00000564342 HERVK_113Q902F9 699 aa9.37□□□□□ -0.91
NSMCE1-207ENST00000564342 WNT8BQ93098 351 aa9.37□□□□□ -0.91
NSMCE1-207ENST00000564342 RNPEPQ9H4A4 650 aa9.37□□□□□ -0.91
NSMCE1-207ENST00000564342 JPH1Q9HDC5 661 aaPredicted RBP9.37□□□□□ -0.91
NSMCE1-207ENST00000564342 CXXC1Q9P0U4 656 aaPredicted RBP9.37□□□□□ -0.91
NSMCE1-207ENST00000564342 SLC9A2Q9UBY0 812 aa9.37□□□□□ -0.91
NSMCE1-207ENST00000564342 ZNF215Q9UL58 517 aaPredicted RBP9.37□□□□□ -0.91
NSMCE1-207ENST00000564342 PCDHA4Q9UN74 947 aa9.37□□□□□ -0.91
NSMCE1-207ENST00000564342 EMSYQ7Z589 1322 aa9.36□□□□□ -0.91
NSMCE1-207ENST00000564342 LAMA3Q16787 3333 aa9.36□□□□□ -0.91
NSMCE1-207ENST00000564342 C17orf102A2RUQ5 167 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms