RNA–Protein interactions for RNA: ENST00000564260.1

RNF40-206, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-206ENST00000564260 DCDC2CA8MYV0 355 aa18.86■□□□□ 0.61
RNF40-206ENST00000564260 H3BRB1 525 aa18.86■□□□□ 0.61
RNF40-206ENST00000564260 LAD1O00515 517 aa18.86■□□□□ 0.61
RNF40-206ENST00000564260 EVI5O60447 810 aa18.86■□□□□ 0.61
RNF40-206ENST00000564260 PTGS1P23219 599 aa18.86■□□□□ 0.61
RNF40-206ENST00000564260 TCF7P36402 384 aaPredicted RBP18.86■□□□□ 0.61
RNF40-206ENST00000564260 FOSBP53539 338 aa18.86■□□□□ 0.61
RNF40-206ENST00000564260 RTP1P59025 263 aa18.86■□□□□ 0.61
RNF40-206ENST00000564260 IRX5P78411 483 aaPredicted RBP18.86■□□□□ 0.61
RNF40-206ENST00000564260 LRRC26Q2I0M4 334 aa18.86■□□□□ 0.61
RNF40-206ENST00000564260 MIS18BP1Q6P0N0 1132 aa18.86■□□□□ 0.61
RNF40-206ENST00000564260 B3GNT9Q6UX72 402 aa18.86■□□□□ 0.61
RNF40-206ENST00000564260 AFAP1L1Q8TED9 768 aa18.86■□□□□ 0.61
RNF40-206ENST00000564260 KAT2BQ92831 832 aa18.86■□□□□ 0.61
RNF40-206ENST00000564260 TUT1Q9H6E5 874 aaKnown RBP18.86■□□□□ 0.61
RNF40-206ENST00000564260 PCDHA10Q9Y5I2 948 aa18.86■□□□□ 0.61
RNF40-206ENST00000564260 SCN10AQ9Y5Y9 1956 aa18.85■□□□□ 0.61
RNF40-206ENST00000564260 GSTTP1A0A1W2PQM5 241 aa18.85■□□□□ 0.61
RNF40-206ENST00000564260 SLC37A4O43826 429 aa18.85■□□□□ 0.61
RNF40-206ENST00000564260 PSAPP07602 524 aa18.85■□□□□ 0.61
RNF40-206ENST00000564260 SYT1P21579 422 aa18.85■□□□□ 0.61
RNF40-206ENST00000564260 PSEN2P49810 448 aa18.85■□□□□ 0.61
RNF40-206ENST00000564260 PPP2R5CQ13362 524 aa18.85■□□□□ 0.61
RNF40-206ENST00000564260 MFSD10Q14728 455 aa18.85■□□□□ 0.61
RNF40-206ENST00000564260 FAM160B1Q5W0V3 765 aa18.85■□□□□ 0.61
RNF40-206ENST00000564260 MCTP1Q6DN14 999 aa18.85■□□□□ 0.61
RNF40-206ENST00000564260 ABHD15Q6UXT9 468 aa18.85■□□□□ 0.61
RNF40-206ENST00000564260 ZSCAN16Q9H4T2 348 aaPredicted RBP18.85■□□□□ 0.61
RNF40-206ENST00000564260 KIF28PB7ZC32 967 aa18.84■□□□□ 0.61
RNF40-206ENST00000564260 BMP15O95972 392 aa18.84■□□□□ 0.61
RNF40-206ENST00000564260 RPLP2P05387 115 aaKnown RBP18.84■□□□□ 0.61
RNF40-206ENST00000564260 GNAT1P11488 350 aa18.84■□□□□ 0.61
RNF40-206ENST00000564260 ATN1P54259 1190 aaPredicted RBP18.84■□□□□ 0.61
RNF40-206ENST00000564260 CALCRLQ16602 461 aa18.84■□□□□ 0.61
RNF40-206ENST00000564260 NBPF20Q3BBV1 942 aa18.84■□□□□ 0.61
RNF40-206ENST00000564260 TTC38Q5R3I4 469 aa18.84■□□□□ 0.61
RNF40-206ENST00000564260 FAM126BQ8IXS8 530 aa18.84■□□□□ 0.61
RNF40-206ENST00000564260 DPF3Q92784 378 aa18.84■□□□□ 0.61
RNF40-206ENST00000564260 PKD2L1Q9P0L9 805 aa18.84■□□□□ 0.61
RNF40-206ENST00000564260 GRIN2DO15399 1336 aa18.83■□□□□ 0.61
RNF40-206ENST00000564260 FAM205CA6NFA0 338 aa18.83■□□□□ 0.6
RNF40-206ENST00000564260 STX6O43752 255 aa18.83■□□□□ 0.6
RNF40-206ENST00000564260 MARCH6O60337 910 aa18.83■□□□□ 0.6
RNF40-206ENST00000564260 DKC1O60832 514 aaKnown RBP eCLIP18.83■□□□□ 0.6
RNF40-206ENST00000564260 CCNE2O96020 404 aa18.83■□□□□ 0.6
RNF40-206ENST00000564260 HOXC8P31273 242 aa18.83■□□□□ 0.6
RNF40-206ENST00000564260 KIAA0753Q2KHM9 967 aa18.83■□□□□ 0.6
RNF40-206ENST00000564260 TRIM60Q495X7 471 aa18.83■□□□□ 0.6
RNF40-206ENST00000564260 C7orf31Q8N865 590 aa18.83■□□□□ 0.6
RNF40-206ENST00000564260 MTMR9Q96QG7 549 aa18.83■□□□□ 0.6
RNF40-206ENST00000564260 BCAS3Q9H6U6 928 aa18.83■□□□□ 0.6
RNF40-206ENST00000564260 NRCAMQ92823 1304 aa18.82■□□□□ 0.6
RNF40-206ENST00000564260 CD4P01730 458 aa18.82■□□□□ 0.6
RNF40-206ENST00000564260 CLTBP09497 229 aa18.82■□□□□ 0.6
RNF40-206ENST00000564260 ZNF286BP0CG31 522 aa18.82■□□□□ 0.6
RNF40-206ENST00000564260 STAT5BP51692 787 aa18.82■□□□□ 0.6
RNF40-206ENST00000564260 TLE2Q04725 743 aa18.82■□□□□ 0.6
RNF40-206ENST00000564260 POTEDQ86YR6 584 aa18.82■□□□□ 0.6
RNF40-206ENST00000564260 NEK9Q8TD19 979 aa18.82■□□□□ 0.6
RNF40-206ENST00000564260 HAS1Q92839 578 aa18.82■□□□□ 0.6
RNF40-206ENST00000564260 GLG1Q92896 1179 aa18.82■□□□□ 0.6
RNF40-206ENST00000564260 FAM167AQ96KS9 214 aa18.82■□□□□ 0.6
RNF40-206ENST00000564260 DISC1Q9NRI5 854 aa18.82■□□□□ 0.6
RNF40-206ENST00000564260 PRKAG2Q9UGJ0 569 aa18.82■□□□□ 0.6
RNF40-206ENST00000564260 GTF2IRD1Q9UHL9 959 aa18.82■□□□□ 0.6
RNF40-206ENST00000564260 PCDHA12Q9UN75 941 aa18.82■□□□□ 0.6
RNF40-206ENST00000564260 ATP11BQ9Y2G3 1177 aa18.82■□□□□ 0.6
RNF40-206ENST00000564260 MAFBQ9Y5Q3 323 aaPredicted RBP18.82■□□□□ 0.6
RNF40-206ENST00000564260 STK24Q9Y6E0 443 aa18.82■□□□□ 0.6
RNF40-206ENST00000564260 DNAH12Q6ZR08 3092 aa18.82■□□□□ 0.6
RNF40-206ENST00000564260 VPS37CA5D8V6 355 aaPredicted RBP18.81■□□□□ 0.6
RNF40-206ENST00000564260 PRPHP41219 470 aa18.81■□□□□ 0.6
RNF40-206ENST00000564260 SP4Q02446 784 aa18.81■□□□□ 0.6
RNF40-206ENST00000564260 ATP6V0A1Q93050 837 aa18.81■□□□□ 0.6
RNF40-206ENST00000564260 ZNF302Q9NR11 478 aa18.81■□□□□ 0.6
RNF40-206ENST00000564260 VAV3Q9UKW4 847 aa18.81■□□□□ 0.6
RNF40-206ENST00000564260 IGSF9BQ9UPX0 1349 aa18.8■□□□□ 0.6
RNF40-206ENST00000564260 RRN3P2A6NIE6 340 aa18.8■□□□□ 0.6
RNF40-206ENST00000564260 BACH1O14867 736 aa18.8■□□□□ 0.6
RNF40-206ENST00000564260 KIAA0355O15063 1070 aa18.8■□□□□ 0.6
RNF40-206ENST00000564260 PQBP1O60828 265 aaKnown RBP18.8■□□□□ 0.6
RNF40-206ENST00000564260 OR52Z1P0C646 297 aa18.8■□□□□ 0.6
RNF40-206ENST00000564260 MCM7P33993 719 aa18.8■□□□□ 0.6
RNF40-206ENST00000564260 PSMC6P62333 389 aa18.8■□□□□ 0.6
RNF40-206ENST00000564260 RAB34Q9BZG1 259 aa18.8■□□□□ 0.6
RNF40-206ENST00000564260 UNC45AQ9H3U1 944 aa18.8■□□□□ 0.6
RNF40-206ENST00000564260 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.8■□□□□ 0.6
RNF40-206ENST00000564260 CEP131Q9UPN4 1083 aa18.8■□□□□ 0.6
RNF40-206ENST00000564260 MTMR6Q9Y217 621 aa18.8■□□□□ 0.6
RNF40-206ENST00000564260 SAMM50Q9Y512 469 aa18.8■□□□□ 0.6
RNF40-206ENST00000564260 MORC2Q9Y6X9 1032 aaPredicted RBP18.8■□□□□ 0.6
RNF40-206ENST00000564260 COL1A2P08123 1366 aa18.8■□□□□ 0.6
RNF40-206ENST00000564260 DDX39AO00148 427 aaKnown RBP18.79■□□□□ 0.6
RNF40-206ENST00000564260 HBP1O60381 514 aa18.79■□□□□ 0.6
RNF40-206ENST00000564260 SORBS3O60504 671 aa18.79■□□□□ 0.6
RNF40-206ENST00000564260 CAND2O75155 1236 aa18.79■□□□□ 0.6
RNF40-206ENST00000564260 TOB1P50616 345 aaPredicted RBP18.79■□□□□ 0.6
RNF40-206ENST00000564260 FAAP100Q0VG06 881 aa18.79■□□□□ 0.6
RNF40-206ENST00000564260 TMEM266Q2M3C6 531 aa18.79■□□□□ 0.6
RNF40-206ENST00000564260 UTP14CQ5TAP6 766 aaKnown RBP18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms