RNA–Protein interactions for RNA: ENST00000564228.5

TCF4-222, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-222ENST00000564228 LUC7L2Q9Y383 392 aaKnown RBP12.19□□□□□ -0.46
TCF4-222ENST00000564228 SCN4AP35499 1836 aa12.18□□□□□ -0.46
TCF4-222ENST00000564228 DNAJC8O75937 253 aaPredicted RBP12.18□□□□□ -0.46
TCF4-222ENST00000564228 IPO7O95373 1038 aaKnown RBP12.18□□□□□ -0.46
TCF4-222ENST00000564228 GHRP10912 638 aa12.18□□□□□ -0.46
TCF4-222ENST00000564228 TCP1P17987 556 aaKnown RBP12.18□□□□□ -0.46
TCF4-222ENST00000564228 CDC25AP30304 524 aa12.18□□□□□ -0.46
TCF4-222ENST00000564228 VAV2P52735 878 aa12.18□□□□□ -0.46
TCF4-222ENST00000564228 TBC1D8BQ0IIM8 1120 aa12.18□□□□□ -0.46
TCF4-222ENST00000564228 IFT88Q13099 833 aa12.18□□□□□ -0.46
TCF4-222ENST00000564228 SLMAPQ14BN4 828 aa12.18□□□□□ -0.46
TCF4-222ENST00000564228 TATDN1Q6P1N9 297 aa12.18□□□□□ -0.46
TCF4-222ENST00000564228 CCDC155Q8N6L0 562 aa12.18□□□□□ -0.46
TCF4-222ENST00000564228 PNMA1Q8ND90 353 aa12.18□□□□□ -0.46
TCF4-222ENST00000564228 SPATA4Q8NEY3 305 aa12.18□□□□□ -0.46
TCF4-222ENST00000564228 TRIM58Q8NG06 486 aa12.18□□□□□ -0.46
TCF4-222ENST00000564228 RNF217Q8TC41 542 aa12.18□□□□□ -0.46
TCF4-222ENST00000564228 RSRC1Q96IZ7 334 aaKnown RBP12.18□□□□□ -0.46
TCF4-222ENST00000564228 CCDC17Q96LX7 622 aa12.18□□□□□ -0.46
TCF4-222ENST00000564228 LRRC1Q9BTT6 524 aa12.18□□□□□ -0.46
TCF4-222ENST00000564228 DEFB129Q9H1M3 183 aa12.18□□□□□ -0.46
TCF4-222ENST00000564228 CENPHQ9H3R5 247 aa12.18□□□□□ -0.46
TCF4-222ENST00000564228 DMGDHQ9UI17 866 aaKnown RBP12.18□□□□□ -0.46
TCF4-222ENST00000564228 CTNND2Q9UQB3 1225 aa12.18□□□□□ -0.46
TCF4-222ENST00000564228 PLIN4Q96Q06 1357 aa12.18□□□□□ -0.46
TCF4-222ENST00000564228 GLTPD2A6NH11 291 aa12.17□□□□□ -0.46
TCF4-222ENST00000564228 KCNJ18B7U540 433 aa12.17□□□□□ -0.46
TCF4-222ENST00000564228 ZNF185O15231 689 aa12.17□□□□□ -0.46
TCF4-222ENST00000564228 MGRN1O60291 552 aa12.17□□□□□ -0.46
TCF4-222ENST00000564228 FMNL1O95466 1100 aaPredicted RBP12.17□□□□□ -0.46
TCF4-222ENST00000564228 ATP1A2P50993 1020 aa12.17□□□□□ -0.46
TCF4-222ENST00000564228 ATP2B2Q01814 1243 aa12.17□□□□□ -0.46
TCF4-222ENST00000564228 SSRP1Q08945 709 aaKnown RBP12.17□□□□□ -0.46
TCF4-222ENST00000564228 KCNJ12Q14500 433 aa12.17□□□□□ -0.46
TCF4-222ENST00000564228 ANKRD20A8PQ5CZ79 823 aa12.17□□□□□ -0.46
TCF4-222ENST00000564228 HAUS3Q68CZ6 603 aa12.17□□□□□ -0.46
TCF4-222ENST00000564228 CEP57Q86XR8 500 aa12.17□□□□□ -0.46
TCF4-222ENST00000564228 APOBEC3FQ8IUX4 373 aaKnown RBP12.17□□□□□ -0.46
TCF4-222ENST00000564228 CMTR1Q8N1G2 835 aaKnown RBP12.17□□□□□ -0.46
TCF4-222ENST00000564228 CCDC82Q8N4S0 544 aa12.17□□□□□ -0.46
TCF4-222ENST00000564228 FANCBQ8NB91 859 aa12.17□□□□□ -0.46
TCF4-222ENST00000564228 CYFIP2Q96F07 1278 aa12.17□□□□□ -0.46
TCF4-222ENST00000564228 ATP6V1G3Q96LB4 118 aa12.17□□□□□ -0.46
TCF4-222ENST00000564228 SH3GL3Q99963 347 aa12.17□□□□□ -0.46
TCF4-222ENST00000564228 TMEM47Q9BQJ4 181 aa12.17□□□□□ -0.46
TCF4-222ENST00000564228 VPS16Q9H269 839 aa12.17□□□□□ -0.46
TCF4-222ENST00000564228 JADE2Q9NQC1 790 aa12.17□□□□□ -0.46
TCF4-222ENST00000564228 TTC26A0AVF1 554 aa12.17□□□□□ -0.46
TCF4-222ENST00000564228 C5orf60A6NFR6 353 aa12.17□□□□□ -0.46
TCF4-222ENST00000564228 LGALS16A8MUM7 142 aa12.17□□□□□ -0.46
TCF4-222ENST00000564228 DDAH1O94760 285 aa12.17□□□□□ -0.46
TCF4-222ENST00000564228 CALM1P0DP23 149 aa12.17□□□□□ -0.46
TCF4-222ENST00000564228 CALM2P0DP24 149 aa12.17□□□□□ -0.46
TCF4-222ENST00000564228 CALM3P0DP25 149 aa12.17□□□□□ -0.46
TCF4-222ENST00000564228 CDK17Q00537 523 aa12.17□□□□□ -0.46
TCF4-222ENST00000564228 GUCY1A3Q02108 690 aa12.17□□□□□ -0.46
TCF4-222ENST00000564228 TROAPQ12815 778 aa12.17□□□□□ -0.46
TCF4-222ENST00000564228 PAK2Q13177 524 aa12.17□□□□□ -0.46
TCF4-222ENST00000564228 ABCB5Q2M3G0 1257 aa12.17□□□□□ -0.46
TCF4-222ENST00000564228 PRAMEF18Q5VWM3 479 aa12.17□□□□□ -0.46
TCF4-222ENST00000564228 WDR59Q6PJI9 974 aa12.17□□□□□ -0.46
TCF4-222ENST00000564228 IFT20Q8IY31 132 aa12.17□□□□□ -0.46
TCF4-222ENST00000564228 SH2D3CQ8N5H7 860 aa12.17□□□□□ -0.46
TCF4-222ENST00000564228 PHKBQ93100 1093 aa12.17□□□□□ -0.46
TCF4-222ENST00000564228 TEPSINQ96N21 525 aa12.17□□□□□ -0.46
TCF4-222ENST00000564228 CSRNP2Q9H175 543 aa12.17□□□□□ -0.46
TCF4-222ENST00000564228 FAM217BQ9NTX9 383 aaPredicted RBP12.17□□□□□ -0.46
TCF4-222ENST00000564228 SPATS2LQ9NUQ6 558 aaKnown RBP12.17□□□□□ -0.46
TCF4-222ENST00000564228 MTMR4Q9NYA4 1195 aa12.17□□□□□ -0.46
TCF4-222ENST00000564228 TAB2Q9NYJ8 693 aa12.17□□□□□ -0.46
TCF4-222ENST00000564228 PGAP2Q9UHJ9 254 aa12.17□□□□□ -0.46
TCF4-222ENST00000564228 ZNF233A6NK53 670 aa12.16□□□□□ -0.46
TCF4-222ENST00000564228 BMP15O95972 392 aa12.16□□□□□ -0.46
TCF4-222ENST00000564228 PDHBP11177 359 aa12.16□□□□□ -0.46
TCF4-222ENST00000564228 RCAN1P53805 252 aa12.16□□□□□ -0.46
TCF4-222ENST00000564228 UBXN1Q04323 297 aa12.16□□□□□ -0.46
TCF4-222ENST00000564228 ADCY2Q08462 1091 aa12.16□□□□□ -0.46
TCF4-222ENST00000564228 PAK1Q13153 545 aa12.16□□□□□ -0.46
TCF4-222ENST00000564228 BIRC2Q13490 618 aa12.16□□□□□ -0.46
TCF4-222ENST00000564228 RRP1BQ14684 758 aaKnown RBP12.16□□□□□ -0.46
TCF4-222ENST00000564228 CRELD2Q6UXH1 353 aaPredicted RBP12.16□□□□□ -0.46
TCF4-222ENST00000564228 DIS3L2Q8IYB7 885 aaKnown RBP12.16□□□□□ -0.46
TCF4-222ENST00000564228 LRRC47Q8N1G4 583 aaKnown RBP12.16□□□□□ -0.46
TCF4-222ENST00000564228 MB21D1Q8N884 522 aa12.16□□□□□ -0.46
TCF4-222ENST00000564228 RETREG2Q8NC44 543 aa12.16□□□□□ -0.46
TCF4-222ENST00000564228 ZNF483Q8TF39 744 aaPredicted RBP12.16□□□□□ -0.46
TCF4-222ENST00000564228 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.16□□□□□ -0.46
TCF4-222ENST00000564228 ANKS1AQ92625 1134 aa12.16□□□□□ -0.46
TCF4-222ENST00000564228 L3MBTL3Q96JM7 780 aaPredicted RBP12.16□□□□□ -0.46
TCF4-222ENST00000564228 PYM1Q9BRP8 204 aaKnown RBP12.16□□□□□ -0.46
TCF4-222ENST00000564228 NUP58Q9BVL2 599 aa12.16□□□□□ -0.46
TCF4-222ENST00000564228 SLC24A3Q9HC58 644 aa12.16□□□□□ -0.46
TCF4-222ENST00000564228 GDF3Q9NR23 364 aa12.16□□□□□ -0.46
TCF4-222ENST00000564228 HOMER3Q9NSC5 361 aa12.16□□□□□ -0.46
TCF4-222ENST00000564228 HYOU1Q9Y4L1 999 aa12.16□□□□□ -0.46
TCF4-222ENST00000564228 IGKV6D-41A0A0C4DH26 115 aa12.15□□□□□ -0.46
TCF4-222ENST00000564228 TACC1O75410 805 aa12.15□□□□□ -0.46
TCF4-222ENST00000564228 TTLL1O95922 423 aa12.15□□□□□ -0.46
TCF4-222ENST00000564228 GH2P01242 217 aa12.15□□□□□ -0.46
TCF4-222ENST00000564228 IFNAR1P17181 557 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms