RNA–Protein interactions for RNA: ENST00000563560.1

RPUSD1-204, Transcript of RNA pseudouridylate synthase domain containing 1, humanhuman

TSL 2

Gene RPUSD1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1-204ENST00000563560 IGKV6D-21A0A0A0MT36 114 aa16.89■□□□□ 0.29
RPUSD1-204ENST00000563560 IQCF3P0C7M6 154 aa16.89■□□□□ 0.29
RPUSD1-204ENST00000563560 GNA11P29992 359 aa16.89■□□□□ 0.29
RPUSD1-204ENST00000563560 SSRP1Q08945 709 aaKnown RBP16.89■□□□□ 0.29
RPUSD1-204ENST00000563560 MBTPS1Q14703 1052 aa16.89■□□□□ 0.29
RPUSD1-204ENST00000563560 MCTP2Q6DN12 878 aa16.89■□□□□ 0.29
RPUSD1-204ENST00000563560 SERINC5Q86VE9 423 aa16.89■□□□□ 0.29
RPUSD1-204ENST00000563560 CCDC148Q8NFR7 591 aa16.89■□□□□ 0.29
RPUSD1-204ENST00000563560 GTF3C6Q969F1 213 aa16.89■□□□□ 0.29
RPUSD1-204ENST00000563560 RNPEPQ9H4A4 650 aa16.89■□□□□ 0.29
RPUSD1-204ENST00000563560 EHMT1Q9H9B1 1298 aa16.89■□□□□ 0.29
RPUSD1-204ENST00000563560 CXXC1Q9P0U4 656 aaPredicted RBP16.89■□□□□ 0.29
RPUSD1-204ENST00000563560 EMSYQ7Z589 1322 aa16.89■□□□□ 0.29
RPUSD1-204ENST00000563560 PRUNE2Q8WUY3 3088 aa16.88■□□□□ 0.29
RPUSD1-204ENST00000563560 EIF5BO60841 1220 aaKnown RBP16.88■□□□□ 0.29
RPUSD1-204ENST00000563560 CCNE2O96020 404 aa16.88■□□□□ 0.29
RPUSD1-204ENST00000563560 SMIM10L2AP0DMW4 78 aa16.88■□□□□ 0.29
RPUSD1-204ENST00000563560 SMIM10L2BP0DMW5 78 aa16.88■□□□□ 0.29
RPUSD1-204ENST00000563560 TCF7P36402 384 aaPredicted RBP16.88■□□□□ 0.29
RPUSD1-204ENST00000563560 RBM25P49756 843 aaKnown RBP16.88■□□□□ 0.29
RPUSD1-204ENST00000563560 SMAD3P84022 425 aaKnown RBP16.88■□□□□ 0.29
RPUSD1-204ENST00000563560 PTK7Q13308 1070 aa16.88■□□□□ 0.29
RPUSD1-204ENST00000563560 ANKRD1Q15327 319 aa16.88■□□□□ 0.29
RPUSD1-204ENST00000563560 C7orf31Q8N865 590 aa16.88■□□□□ 0.29
RPUSD1-204ENST00000563560 CAGE1Q8TC20 777 aa16.88■□□□□ 0.29
RPUSD1-204ENST00000563560 PHF20Q9BVI0 1012 aa16.88■□□□□ 0.29
RPUSD1-204ENST00000563560 PCDHA4Q9UN74 947 aa16.88■□□□□ 0.29
RPUSD1-204ENST00000563560 UNC80Q8N2C7 3258 aa16.87■□□□□ 0.29
RPUSD1-204ENST00000563560 NOP56O00567 594 aaKnown RBP16.87■□□□□ 0.29
RPUSD1-204ENST00000563560 CXCL10P02778 98 aa16.87■□□□□ 0.29
RPUSD1-204ENST00000563560 CKBP12277 381 aa16.87■□□□□ 0.29
RPUSD1-204ENST00000563560 NEK4P51957 841 aa16.87■□□□□ 0.29
RPUSD1-204ENST00000563560 MKRN4PQ13434 485 aaPredicted RBP16.87■□□□□ 0.29
RPUSD1-204ENST00000563560 TCTN1Q2MV58 587 aa16.87■□□□□ 0.29
RPUSD1-204ENST00000563560 PSRC1Q6PGN9 363 aaPredicted RBP16.87■□□□□ 0.29
RPUSD1-204ENST00000563560 TRIM22Q8IYM9 498 aa16.87■□□□□ 0.29
RPUSD1-204ENST00000563560 AFAP1L1Q8TED9 768 aa16.87■□□□□ 0.29
RPUSD1-204ENST00000563560 SEPT1Q8WYJ6 367 aa16.87■□□□□ 0.29
RPUSD1-204ENST00000563560 RNPC3Q96LT9 517 aaKnown RBP16.87■□□□□ 0.29
RPUSD1-204ENST00000563560 MBOAT7Q96N66 472 aa16.87■□□□□ 0.29
RPUSD1-204ENST00000563560 SLKQ9H2G2 1235 aaPredicted RBP16.87■□□□□ 0.29
RPUSD1-204ENST00000563560 JPH1Q9HDC5 661 aaPredicted RBP16.87■□□□□ 0.29
RPUSD1-204ENST00000563560 GJB4Q9NTQ9 266 aa16.87■□□□□ 0.29
RPUSD1-204ENST00000563560 PKD2L1Q9P0L9 805 aa16.87■□□□□ 0.29
RPUSD1-204ENST00000563560 SLC9A2Q9UBY0 812 aa16.87■□□□□ 0.29
RPUSD1-204ENST00000563560 TREHO43280 583 aa16.86■□□□□ 0.29
RPUSD1-204ENST00000563560 RFC2P35250 354 aa16.86■□□□□ 0.29
RPUSD1-204ENST00000563560 ACTR2P61160 394 aa16.86■□□□□ 0.29
RPUSD1-204ENST00000563560 AKAP17AQ02040 695 aaKnown RBP16.86■□□□□ 0.29
RPUSD1-204ENST00000563560 MARCH8Q5T0T0 291 aa16.86■□□□□ 0.29
RPUSD1-204ENST00000563560 Q7L0L9 218 aa16.86■□□□□ 0.29
RPUSD1-204ENST00000563560 NECAB1Q8N987 351 aa16.86■□□□□ 0.29
RPUSD1-204ENST00000563560 NSUN7Q8NE18 718 aaKnown RBP16.86■□□□□ 0.29
RPUSD1-204ENST00000563560 BICD2Q8TD16 824 aa16.86■□□□□ 0.29
RPUSD1-204ENST00000563560 LMBR1Q8WVP7 490 aa16.86■□□□□ 0.29
RPUSD1-204ENST00000563560 OSBPL7Q9BZF2 842 aa16.86■□□□□ 0.29
RPUSD1-204ENST00000563560 SPTBN5Q9NRC6 3674 aaKnown RBP16.85■□□□□ 0.29
RPUSD1-204ENST00000563560 CYP3A7-CYP3A51PA0A087WV96 503 aa16.85■□□□□ 0.29
RPUSD1-204ENST00000563560 MBLAC1A4D2B0 266 aaPredicted RBP16.85■□□□□ 0.29
RPUSD1-204ENST00000563560 CPLX1O14810 134 aa16.85■□□□□ 0.29
RPUSD1-204ENST00000563560 NBNO60934 754 aa16.85■□□□□ 0.29
RPUSD1-204ENST00000563560 PFKMP08237 780 aa16.85■□□□□ 0.29
RPUSD1-204ENST00000563560 CYP3A7P24462 503 aa16.85■□□□□ 0.29
RPUSD1-204ENST00000563560 CHMP4BP1P59074 171 aa16.85■□□□□ 0.29
RPUSD1-204ENST00000563560 SP4Q02446 784 aa16.85■□□□□ 0.29
RPUSD1-204ENST00000563560 BFSP2Q13515 415 aa16.85■□□□□ 0.29
RPUSD1-204ENST00000563560 UTP14CQ5TAP6 766 aaKnown RBP16.85■□□□□ 0.29
RPUSD1-204ENST00000563560 ABHD15Q6UXT9 468 aa16.85■□□□□ 0.29
RPUSD1-204ENST00000563560 BLIDQ8IZY5 108 aa16.85■□□□□ 0.29
RPUSD1-204ENST00000563560 TNFRSF25Q93038 417 aa16.85■□□□□ 0.29
RPUSD1-204ENST00000563560 TTYH1Q9H313 450 aaPredicted RBP16.85■□□□□ 0.29
RPUSD1-204ENST00000563560 MTMR10Q9NXD2 777 aa16.85■□□□□ 0.29
RPUSD1-204ENST00000563560 KCNJ14Q9UNX9 436 aa16.85■□□□□ 0.29
RPUSD1-204ENST00000563560 EVPLQ92817 2033 aa16.85■□□□□ 0.29
RPUSD1-204ENST00000563560 C17orf102A2RUQ5 167 aa16.84■□□□□ 0.29
RPUSD1-204ENST00000563560 SELPP16109 830 aa16.84■□□□□ 0.29
RPUSD1-204ENST00000563560 USP11P51784 963 aa16.84■□□□□ 0.29
RPUSD1-204ENST00000563560 ZNF618Q5T7W0 954 aa16.84■□□□□ 0.29
RPUSD1-204ENST00000563560 GALNT17Q6IS24 598 aa16.84■□□□□ 0.29
RPUSD1-204ENST00000563560 B3GNT9Q6UX72 402 aa16.84■□□□□ 0.29
RPUSD1-204ENST00000563560 LRRC8DQ7L1W4 858 aa16.84■□□□□ 0.29
RPUSD1-204ENST00000563560 PLA2G4DQ86XP0 818 aa16.84■□□□□ 0.29
RPUSD1-204ENST00000563560 SETD4Q9NVD3 440 aa16.84■□□□□ 0.29
RPUSD1-204ENST00000563560 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.83■□□□□ 0.28
RPUSD1-204ENST00000563560 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.83■□□□□ 0.28
RPUSD1-204ENST00000563560 GRXCR1A8MXD5 290 aa16.83■□□□□ 0.28
RPUSD1-204ENST00000563560 IPO5O00410 1097 aaKnown RBP16.83■□□□□ 0.28
RPUSD1-204ENST00000563560 MSH4O15457 936 aa16.83■□□□□ 0.28
RPUSD1-204ENST00000563560 CDKL5O76039 1030 aa16.83■□□□□ 0.28
RPUSD1-204ENST00000563560 FGBP02675 491 aa16.83■□□□□ 0.28
RPUSD1-204ENST00000563560 ATP4AP20648 1035 aa16.83■□□□□ 0.28
RPUSD1-204ENST00000563560 NLRP5P59047 1200 aa16.83■□□□□ 0.28
RPUSD1-204ENST00000563560 SETQ01105 290 aaPredicted RBP16.83■□□□□ 0.28
RPUSD1-204ENST00000563560 Q4G0T1 1027 aa16.83■□□□□ 0.28
RPUSD1-204ENST00000563560 EARS2Q5JPH6 523 aaKnown RBP16.83■□□□□ 0.28
RPUSD1-204ENST00000563560 CPLX2Q6PUV4 134 aaKnown RBP16.83■□□□□ 0.28
RPUSD1-204ENST00000563560 OTOP2Q7RTS6 562 aa16.83■□□□□ 0.28
RPUSD1-204ENST00000563560 PLPPR4Q7Z2D5 763 aa16.83■□□□□ 0.28
RPUSD1-204ENST00000563560 RPAINQ86UA6 219 aa16.83■□□□□ 0.28
RPUSD1-204ENST00000563560 RPUSD2Q8IZ73 545 aaKnown RBP16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms