RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 PLA2G1BP04054 148 aaKnown RBP7.09□□□□□ -1.27
LINC00254-201ENST00000563416 SRGAP2CP0DJJ0 459 aa7.09□□□□□ -1.27
LINC00254-201ENST00000563416 STAT5AP42229 794 aa7.09□□□□□ -1.27
LINC00254-201ENST00000563416 GPR19Q15760 415 aa7.09□□□□□ -1.27
LINC00254-201ENST00000563416 CRY1Q16526 586 aa7.09□□□□□ -1.27
LINC00254-201ENST00000563416 FNDC3BQ53EP0 1204 aaKnown RBP7.09□□□□□ -1.27
LINC00254-201ENST00000563416 LCNL1Q6ZST4 164 aa7.09□□□□□ -1.27
LINC00254-201ENST00000563416 KCTD1Q719H9 257 aa7.09□□□□□ -1.27
LINC00254-201ENST00000563416 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.09□□□□□ -1.27
LINC00254-201ENST00000563416 NLGN4XQ8N0W4 816 aa7.09□□□□□ -1.27
LINC00254-201ENST00000563416 SYNPOQ8N3V7 929 aa7.09□□□□□ -1.27
LINC00254-201ENST00000563416 FAM26EQ8N5C1 309 aa7.09□□□□□ -1.27
LINC00254-201ENST00000563416 TTLL6Q8N841 843 aa7.09□□□□□ -1.27
LINC00254-201ENST00000563416 SLC7A14Q8TBB6 771 aa7.09□□□□□ -1.27
LINC00254-201ENST00000563416 PRG4Q92954 1404 aaPredicted RBP7.09□□□□□ -1.28
LINC00254-201ENST00000563416 KIF13AQ9H1H9 1805 aa7.08□□□□□ -1.28
LINC00254-201ENST00000563416 NKRFO15226 690 aaKnown RBP eCLIP7.08□□□□□ -1.28
LINC00254-201ENST00000563416 TUSC3Q13454 348 aa7.08□□□□□ -1.28
LINC00254-201ENST00000563416 SQSTM1Q13501 440 aa7.08□□□□□ -1.28
LINC00254-201ENST00000563416 CR1LQ2VPA4 569 aa7.08□□□□□ -1.28
LINC00254-201ENST00000563416 TEPPQ6URK8 271 aa7.08□□□□□ -1.28
LINC00254-201ENST00000563416 TTLL7Q6ZT98 887 aa7.08□□□□□ -1.28
LINC00254-201ENST00000563416 BRAPQ7Z569 592 aa7.08□□□□□ -1.28
LINC00254-201ENST00000563416 SAPCD2Q86UD0 394 aa7.08□□□□□ -1.28
LINC00254-201ENST00000563416 LINC00482Q8N8I6 264 aa7.08□□□□□ -1.28
LINC00254-201ENST00000563416 KYQ8NBH2 561 aa7.08□□□□□ -1.28
LINC00254-201ENST00000563416 GORASP1Q9BQQ3 440 aa7.08□□□□□ -1.28
LINC00254-201ENST00000563416 C11orf84Q9BUA3 381 aaPredicted RBP7.08□□□□□ -1.28
LINC00254-201ENST00000563416 ADCY10Q96PN6 1610 aa7.08□□□□□ -1.28
LINC00254-201ENST00000563416 DISP1Q96F81 1524 aa7.07□□□□□ -1.28
LINC00254-201ENST00000563416 CCDC66A2RUB6 948 aa7.07□□□□□ -1.28
LINC00254-201ENST00000563416 NPTXRO95502 500 aa7.07□□□□□ -1.28
LINC00254-201ENST00000563416 PYGMP11217 842 aa7.07□□□□□ -1.28
LINC00254-201ENST00000563416 VWA3BQ502W6 1294 aa7.07□□□□□ -1.28
LINC00254-201ENST00000563416 ARHGAP36Q6ZRI8 547 aa7.07□□□□□ -1.28
LINC00254-201ENST00000563416 HOMER1Q86YM7 354 aa7.07□□□□□ -1.28
LINC00254-201ENST00000563416 SP8Q8IXZ3 490 aa7.07□□□□□ -1.28
LINC00254-201ENST00000563416 NOX5Q96PH1 765 aa7.07□□□□□ -1.28
LINC00254-201ENST00000563416 WRNIP1Q96S55 665 aa7.07□□□□□ -1.28
LINC00254-201ENST00000563416 PDGFDQ9GZP0 370 aaPredicted RBP7.07□□□□□ -1.28
LINC00254-201ENST00000563416 HSPBP1Q9NZL4 362 aa7.07□□□□□ -1.28
LINC00254-201ENST00000563416 NTMQ9P121 344 aa7.07□□□□□ -1.28
LINC00254-201ENST00000563416 SAMD9Q5K651 1589 aa7.07□□□□□ -1.28
LINC00254-201ENST00000563416 SH3D21A4FU49 640 aa7.06□□□□□ -1.28
LINC00254-201ENST00000563416 BTBD11A6QL63 1104 aa7.06□□□□□ -1.28
LINC00254-201ENST00000563416 B4E1Z4 1266 aa7.06□□□□□ -1.28
LINC00254-201ENST00000563416 SASH1O94885 1247 aa7.06□□□□□ -1.28
LINC00254-201ENST00000563416 RASGRP1O95267 797 aa7.06□□□□□ -1.28
LINC00254-201ENST00000563416 LRG1P02750 347 aa7.06□□□□□ -1.28
LINC00254-201ENST00000563416 PDE6AP16499 860 aa7.06□□□□□ -1.28
LINC00254-201ENST00000563416 DNM2P50570 870 aa7.06□□□□□ -1.28
LINC00254-201ENST00000563416 EPHA5P54756 1037 aa7.06□□□□□ -1.28
LINC00254-201ENST00000563416 ITGA1P56199 1179 aa7.06□□□□□ -1.28
LINC00254-201ENST00000563416 GRIN1Q05586 938 aa7.06□□□□□ -1.28
LINC00254-201ENST00000563416 VMACQ2NL98 169 aa7.06□□□□□ -1.28
LINC00254-201ENST00000563416 SPOCD1Q6ZMY3 1216 aa7.06□□□□□ -1.28
LINC00254-201ENST00000563416 CLEC4DQ8WXI8 215 aa7.06□□□□□ -1.28
LINC00254-201ENST00000563416 APPBP2Q92624 585 aa7.06□□□□□ -1.28
LINC00254-201ENST00000563416 TMEM209Q96SK2 561 aa7.06□□□□□ -1.28
LINC00254-201ENST00000563416 CELF4Q9BZC1 486 aaKnown RBP7.06□□□□□ -1.28
LINC00254-201ENST00000563416 SRPK3Q9UPE1 567 aa7.06□□□□□ -1.28
LINC00254-201ENST00000563416 ESYT3A0FGR9 886 aa7.05□□□□□ -1.28
LINC00254-201ENST00000563416 FFAR3O14843 346 aa7.05□□□□□ -1.28
LINC00254-201ENST00000563416 CYP7B1O75881 506 aa7.05□□□□□ -1.28
LINC00254-201ENST00000563416 RAPGEF3O95398 923 aa7.05□□□□□ -1.28
LINC00254-201ENST00000563416 ASMTLO95671 621 aa7.05□□□□□ -1.28
LINC00254-201ENST00000563416 FAHP16930 419 aa7.05□□□□□ -1.28
LINC00254-201ENST00000563416 BMP7P18075 431 aa7.05□□□□□ -1.28
LINC00254-201ENST00000563416 GJA4P35212 333 aa7.05□□□□□ -1.28
LINC00254-201ENST00000563416 SMAD4Q13485 552 aaKnown RBP7.05□□□□□ -1.28
LINC00254-201ENST00000563416 TCEA2Q15560 299 aa7.05□□□□□ -1.28
LINC00254-201ENST00000563416 PAN2Q504Q3 1202 aaKnown RBP7.05□□□□□ -1.28
LINC00254-201ENST00000563416 FIGNQ5HY92 759 aa7.05□□□□□ -1.28
LINC00254-201ENST00000563416 VASNQ6EMK4 673 aa7.05□□□□□ -1.28
LINC00254-201ENST00000563416 CYB5RLQ6IPT4 315 aa7.05□□□□□ -1.28
LINC00254-201ENST00000563416 NOP9Q86U38 636 aaKnown RBP7.05□□□□□ -1.28
LINC00254-201ENST00000563416 KRTAP1-3Q8IUG1 177 aa7.05□□□□□ -1.28
LINC00254-201ENST00000563416 SCLYQ96I15 445 aa7.05□□□□□ -1.28
LINC00254-201ENST00000563416 RNPC3Q96LT9 517 aaKnown RBP7.05□□□□□ -1.28
LINC00254-201ENST00000563416 CLIC6Q96NY7 704 aa7.05□□□□□ -1.28
LINC00254-201ENST00000563416 KANSL2Q9H9L4 492 aa7.05□□□□□ -1.28
LINC00254-201ENST00000563416 TRIM39Q9HCM9 518 aa7.05□□□□□ -1.28
LINC00254-201ENST00000563416 LUC7LQ9NQ29 371 aaKnown RBP7.05□□□□□ -1.28
LINC00254-201ENST00000563416 CBLCQ9ULV8 474 aa7.05□□□□□ -1.28
LINC00254-201ENST00000563416 LOC105371045A0A1W2PR82 267 aa7.04□□□□□ -1.28
LINC00254-201ENST00000563416 TCRBV16S1A1N1A0A5B0 115 aa7.04□□□□□ -1.28
LINC00254-201ENST00000563416 LTFP02788 710 aa7.04□□□□□ -1.28
LINC00254-201ENST00000563416 KRT15P19012 456 aa7.04□□□□□ -1.28
LINC00254-201ENST00000563416 THBS2P35442 1172 aa7.04□□□□□ -1.28
LINC00254-201ENST00000563416 LACTBP83111 547 aaPredicted RBP7.04□□□□□ -1.28
LINC00254-201ENST00000563416 LIPIQ6XZB0 460 aa7.04□□□□□ -1.28
LINC00254-201ENST00000563416 OSTM1Q86WC4 334 aa7.04□□□□□ -1.28
LINC00254-201ENST00000563416 RBM12BQ8IXT5 1001 aaKnown RBP7.04□□□□□ -1.28
LINC00254-201ENST00000563416 MARCH10Q8NA82 808 aaPredicted RBP7.04□□□□□ -1.28
LINC00254-201ENST00000563416 ZNF526Q8TF50 670 aaPredicted RBP7.04□□□□□ -1.28
LINC00254-201ENST00000563416 CD244Q9BZW8 370 aa7.04□□□□□ -1.28
LINC00254-201ENST00000563416 ATP23Q9Y6H3 246 aa7.04□□□□□ -1.28
LINC00254-201ENST00000563416 TCRBV5S4A2TA0A5A2 114 aa7.03□□□□□ -1.28
LINC00254-201ENST00000563416 RFPL3O75679 317 aa7.03□□□□□ -1.28
LINC00254-201ENST00000563416 ASLP04424 464 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms