RNA–Protein interactions for RNA: ENST00000563367.1

NME3-203, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 3

Gene NME3, Length 891 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-203ENST00000563367 SLC9A2Q9UBY0 812 aa32.21■■■□□ 2.75
NME3-203ENST00000563367 TET1Q8NFU7 2136 aa32.21■■■□□ 2.75
NME3-203ENST00000563367 PITPNM1O00562 1244 aa32.2■■■□□ 2.75
NME3-203ENST00000563367 FDPSP14324 419 aaKnown RBP32.2■■■□□ 2.75
NME3-203ENST00000563367 FAM177A1Q8N128 213 aaPredicted RBP32.2■■■□□ 2.75
NME3-203ENST00000563367 DAGLBQ8NCG7 672 aa32.2■■■□□ 2.75
NME3-203ENST00000563367 SDF4Q9BRK5 362 aa32.2■■■□□ 2.75
NME3-203ENST00000563367 ORC3Q9UBD5 711 aaPredicted RBP32.2■■■□□ 2.75
NME3-203ENST00000563367 HOXC8P31273 242 aa32.19■■■□□ 2.74
NME3-203ENST00000563367 CIITAP33076 1130 aa32.19■■■□□ 2.74
NME3-203ENST00000563367 RBM25P49756 843 aaKnown RBP32.19■■■□□ 2.74
NME3-203ENST00000563367 ST3GAL1Q11201 340 aa32.19■■■□□ 2.74
NME3-203ENST00000563367 BFSP2Q13515 415 aa32.19■■■□□ 2.74
NME3-203ENST00000563367 WNT8BQ93098 351 aa32.19■■■□□ 2.74
NME3-203ENST00000563367 PHF20Q9BVI0 1012 aa32.19■■■□□ 2.74
NME3-203ENST00000563367 RNPEPQ9H4A4 650 aa32.19■■■□□ 2.74
NME3-203ENST00000563367 ZNF215Q9UL58 517 aaPredicted RBP32.19■■■□□ 2.74
NME3-203ENST00000563367 IQCF3P0C7M6 154 aa32.18■■■□□ 2.74
NME3-203ENST00000563367 RETREG2Q8NC44 543 aa32.18■■■□□ 2.74
NME3-203ENST00000563367 NSUN7Q8NE18 718 aaKnown RBP32.18■■■□□ 2.74
NME3-203ENST00000563367 WDR81Q562E7 1941 aa32.18■■■□□ 2.74
NME3-203ENST00000563367 ACTR2P61160 394 aa32.17■■■□□ 2.74
NME3-203ENST00000563367 GALNT17Q6IS24 598 aa32.17■■■□□ 2.74
NME3-203ENST00000563367 PSRC1Q6PGN9 363 aaPredicted RBP32.17■■■□□ 2.74
NME3-203ENST00000563367 CAGE1Q8TC20 777 aa32.17■■■□□ 2.74
NME3-203ENST00000563367 PCYT2Q99447 389 aa32.17■■■□□ 2.74
NME3-203ENST00000563367 LIMCH1Q9UPQ0 1083 aa32.17■■■□□ 2.74
NME3-203ENST00000563367 C17orf102A2RUQ5 167 aa32.16■■■□□ 2.74
NME3-203ENST00000563367 DDX39AO00148 427 aaKnown RBP32.16■■■□□ 2.74
NME3-203ENST00000563367 DHX15O43143 795 aaKnown RBP32.16■■■□□ 2.74
NME3-203ENST00000563367 PTK7Q13308 1070 aa32.16■■■□□ 2.74
NME3-203ENST00000563367 TRIM71Q2Q1W2 868 aaKnown RBP32.16■■■□□ 2.74
NME3-203ENST00000563367 PRR16Q569H4 304 aa32.16■■■□□ 2.74
NME3-203ENST00000563367 TBCKQ8TEA7 893 aa32.16■■■□□ 2.74
NME3-203ENST00000563367 LENG9Q96B70 501 aa32.16■■■□□ 2.74
NME3-203ENST00000563367 SETD4Q9NVD3 440 aa32.16■■■□□ 2.74
NME3-203ENST00000563367 IPO5O00410 1097 aaKnown RBP32.15■■■□□ 2.74
NME3-203ENST00000563367 JAK2O60674 1132 aa32.15■■■□□ 2.74
NME3-203ENST00000563367 LGR5O75473 907 aa32.15■■■□□ 2.74
NME3-203ENST00000563367 CCNE2O96020 404 aa32.15■■■□□ 2.74
NME3-203ENST00000563367 USP11P51784 963 aa32.15■■■□□ 2.74
NME3-203ENST00000563367 RBL2Q08999 1139 aa32.15■■■□□ 2.74
NME3-203ENST00000563367 RASIP1Q5U651 963 aa32.15■■■□□ 2.74
NME3-203ENST00000563367 DEFB128Q7Z7B8 93 aa32.15■■■□□ 2.74
NME3-203ENST00000563367 RPUSD2Q8IZ73 545 aaKnown RBP32.15■■■□□ 2.74
NME3-203ENST00000563367 CCDC155Q8N6L0 562 aa32.15■■■□□ 2.74
NME3-203ENST00000563367 MYH9P35579 1960 aaKnown RBP32.14■■■□□ 2.74
NME3-203ENST00000563367 TREHO43280 583 aa32.14■■■□□ 2.74
NME3-203ENST00000563367 FGBP02675 491 aa32.14■■■□□ 2.74
NME3-203ENST00000563367 CKBP12277 381 aa32.14■■■□□ 2.74
NME3-203ENST00000563367 MARK3P27448 753 aa32.14■■■□□ 2.74
NME3-203ENST00000563367 SETQ01105 290 aaPredicted RBP32.14■■■□□ 2.74
NME3-203ENST00000563367 SERINC5Q86VE9 423 aa32.14■■■□□ 2.74
NME3-203ENST00000563367 AFAP1L1Q8TED9 768 aa32.14■■■□□ 2.74
NME3-203ENST00000563367 GLG1Q92896 1179 aa32.14■■■□□ 2.74
NME3-203ENST00000563367 ATP6V0A1Q93050 837 aa32.14■■■□□ 2.74
NME3-203ENST00000563367 ZNF577Q9BSK1 485 aa32.14■■■□□ 2.74
NME3-203ENST00000563367 SMARCAD1Q9H4L7 1026 aa32.14■■■□□ 2.74
NME3-203ENST00000563367 ERAP1Q9NZ08 941 aa32.14■■■□□ 2.74
NME3-203ENST00000563367 EMSYQ7Z589 1322 aa32.14■■■□□ 2.74
NME3-203ENST00000563367 ATG7O95352 703 aa32.13■■■□□ 2.73
NME3-203ENST00000563367 GPR153Q6NV75 609 aa32.13■■■□□ 2.73
NME3-203ENST00000563367 OTOP2Q7RTS6 562 aa32.13■■■□□ 2.73
NME3-203ENST00000563367 HERVK_113Q902F9 699 aa32.13■■■□□ 2.73
NME3-203ENST00000563367 WASF1Q92558 559 aa32.13■■■□□ 2.73
NME3-203ENST00000563367 RBAK-RBAKDNI3L0D1 243 aa32.12■■■□□ 2.73
NME3-203ENST00000563367 SELPP16109 830 aa32.12■■■□□ 2.73
NME3-203ENST00000563367 XBP1P17861 261 aa32.12■■■□□ 2.73
NME3-203ENST00000563367 ADAM17P78536 824 aa32.12■■■□□ 2.73
NME3-203ENST00000563367 GPNMBQ14956 572 aa32.12■■■□□ 2.73
NME3-203ENST00000563367 OXER1Q8TDS5 423 aa32.12■■■□□ 2.73
NME3-203ENST00000563367 LMBR1Q8WVP7 490 aa32.12■■■□□ 2.73
NME3-203ENST00000563367 CXXC1Q9P0U4 656 aaPredicted RBP32.12■■■□□ 2.73
NME3-203ENST00000563367 RFC2P35250 354 aa32.11■■■□□ 2.73
NME3-203ENST00000563367 TRAF7Q6Q0C0 670 aa32.11■■■□□ 2.73
NME3-203ENST00000563367 LRRC8DQ7L1W4 858 aa32.11■■■□□ 2.73
NME3-203ENST00000563367 GBF1Q92538 1859 aa32.11■■■□□ 2.73
NME3-203ENST00000563367 SMAD3P84022 425 aaKnown RBP32.1■■■□□ 2.73
NME3-203ENST00000563367 NONOQ15233 471 aaKnown RBP eCLIP32.1■■■□□ 2.73
NME3-203ENST00000563367 FAM109BQ6ICB4 259 aaPredicted RBP32.1■■■□□ 2.73
NME3-203ENST00000563367 ABHD15Q6UXT9 468 aa32.1■■■□□ 2.73
NME3-203ENST00000563367 Q7L0L9 218 aa32.1■■■□□ 2.73
NME3-203ENST00000563367 TBC1D22BQ9NU19 505 aa32.1■■■□□ 2.73
NME3-203ENST00000563367 NRCAMQ92823 1304 aa32.09■■■□□ 2.73
NME3-203ENST00000563367 MSH4O15457 936 aa32.09■■■□□ 2.73
NME3-203ENST00000563367 TDP2O95551 362 aa32.09■■■□□ 2.73
NME3-203ENST00000563367 PFKMP08237 780 aa32.09■■■□□ 2.73
NME3-203ENST00000563367 GNAT1P11488 350 aa32.09■■■□□ 2.73
NME3-203ENST00000563367 INF2Q27J81 1249 aa32.09■■■□□ 2.73
NME3-203ENST00000563367 ZNF618Q5T7W0 954 aa32.09■■■□□ 2.73
NME3-203ENST00000563367 KRT25Q7Z3Z0 450 aa32.09■■■□□ 2.73
NME3-203ENST00000563367 CCDC83Q8IWF9 413 aa32.09■■■□□ 2.73
NME3-203ENST00000563367 AZI2Q9H6S1 392 aa32.09■■■□□ 2.73
NME3-203ENST00000563367 IGKV6D-21A0A0A0MT36 114 aa32.08■■■□□ 2.73
NME3-203ENST00000563367 STAT5BP51692 787 aa32.08■■■□□ 2.73
NME3-203ENST00000563367 PPFIA1Q13136 1202 aa32.08■■■□□ 2.73
NME3-203ENST00000563367 PLPPR4Q7Z2D5 763 aa32.08■■■□□ 2.73
NME3-203ENST00000563367 CYP3A7-CYP3A51PA0A087WV96 503 aa32.07■■■□□ 2.72
NME3-203ENST00000563367 CYP3A7P24462 503 aa32.07■■■□□ 2.72
NME3-203ENST00000563367 THPOP40225 353 aa32.07■■■□□ 2.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms