RNA–Protein interactions for RNA: ENST00000562670.5

CLK3-209, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-209ENST00000562670 USP6NLQ92738 828 aa15.6■□□□□ 0.09
CLK3-209ENST00000562670 SMARCE1Q969G3 411 aa15.6■□□□□ 0.09
CLK3-209ENST00000562670 ZFP91Q96JP5 570 aaPredicted RBP15.6■□□□□ 0.09
CLK3-209ENST00000562670 C7orf25Q9BPX7 421 aa15.6■□□□□ 0.09
CLK3-209ENST00000562670 GTPBP4Q9BZE4 634 aaKnown RBP15.6■□□□□ 0.09
CLK3-209ENST00000562670 JPH1Q9HDC5 661 aaPredicted RBP15.6■□□□□ 0.09
CLK3-209ENST00000562670 ANO10Q9NW15 660 aa15.6■□□□□ 0.09
CLK3-209ENST00000562670 PCDHA5Q9Y5H7 936 aa15.6■□□□□ 0.09
CLK3-209ENST00000562670 FOXN1O15353 648 aa15.59■□□□□ 0.09
CLK3-209ENST00000562670 P4HBP07237 508 aaKnown RBP15.59■□□□□ 0.09
CLK3-209ENST00000562670 PRR29P0C7W0 189 aa15.59■□□□□ 0.09
CLK3-209ENST00000562670 MAP2K5Q13163 448 aa15.59■□□□□ 0.09
CLK3-209ENST00000562670 NEDD9Q14511 834 aa15.59■□□□□ 0.09
CLK3-209ENST00000562670 ECM1Q16610 540 aa15.59■□□□□ 0.09
CLK3-209ENST00000562670 SV2BQ7L1I2 683 aa15.59■□□□□ 0.09
CLK3-209ENST00000562670 ARMCX2Q7L311 632 aa15.59■□□□□ 0.09
CLK3-209ENST00000562670 MIER3Q7Z3K6 550 aa15.59■□□□□ 0.09
CLK3-209ENST00000562670 GAS2L3Q86XJ1 694 aa15.59■□□□□ 0.09
CLK3-209ENST00000562670 MAML3Q96JK9 1138 aa15.59■□□□□ 0.09
CLK3-209ENST00000562670 TRIM9Q9C026 710 aa15.59■□□□□ 0.09
CLK3-209ENST00000562670 RMND1Q9NWS8 449 aa15.59■□□□□ 0.09
CLK3-209ENST00000562670 RBM47A0AV96 593 aaKnown RBP15.58■□□□□ 0.08
CLK3-209ENST00000562670 POTEFA5A3E0 1075 aa15.58■□□□□ 0.08
CLK3-209ENST00000562670 SLITRK3O94933 977 aa15.58■□□□□ 0.08
CLK3-209ENST00000562670 CCNE2O96020 404 aa15.58■□□□□ 0.08
CLK3-209ENST00000562670 UBA1P22314 1058 aaKnown RBP15.58■□□□□ 0.08
CLK3-209ENST00000562670 NLRP12P59046 1061 aa15.58■□□□□ 0.08
CLK3-209ENST00000562670 KCNB1Q14721 858 aa15.58■□□□□ 0.08
CLK3-209ENST00000562670 ZRSR1Q15695 479 aaKnown RBP15.58■□□□□ 0.08
CLK3-209ENST00000562670 POTEGQ6S5H5 508 aa15.58■□□□□ 0.08
CLK3-209ENST00000562670 METTL7BQ6UX53 244 aa15.58■□□□□ 0.08
CLK3-209ENST00000562670 KCNK18Q7Z418 384 aa15.58■□□□□ 0.08
CLK3-209ENST00000562670 DPP9Q86TI2 863 aa15.58■□□□□ 0.08
CLK3-209ENST00000562670 SCFD2Q8WU76 684 aa15.58■□□□□ 0.08
CLK3-209ENST00000562670 LXNQ9BS40 222 aa15.58■□□□□ 0.08
CLK3-209ENST00000562670 KATNBL1Q9H079 304 aa15.58■□□□□ 0.08
CLK3-209ENST00000562670 SLC9A2Q9UBY0 812 aa15.58■□□□□ 0.08
CLK3-209ENST00000562670 KIAA1024Q9UPX6 916 aa15.58■□□□□ 0.08
CLK3-209ENST00000562670 MGAMO43451 1857 aa15.58■□□□□ 0.08
CLK3-209ENST00000562670 GOLGA6L3A6NEY3 463 aa15.57■□□□□ 0.08
CLK3-209ENST00000562670 CHMP2AO43633 222 aa15.57■□□□□ 0.08
CLK3-209ENST00000562670 DKC1O60832 514 aaKnown RBP eCLIP15.57■□□□□ 0.08
CLK3-209ENST00000562670 AOC2O75106 756 aa15.57■□□□□ 0.08
CLK3-209ENST00000562670 EYA4O95677 639 aa15.57■□□□□ 0.08
CLK3-209ENST00000562670 IGHA2P01877 340 aa15.57■□□□□ 0.08
CLK3-209ENST00000562670 RGS2P41220 211 aa15.57■□□□□ 0.08
CLK3-209ENST00000562670 AFMP43652 599 aa15.57■□□□□ 0.08
CLK3-209ENST00000562670 MORC3Q14149 939 aa15.57■□□□□ 0.08
CLK3-209ENST00000562670 CT47A1Q5JQC4 288 aaPredicted RBP15.57■□□□□ 0.08
CLK3-209ENST00000562670 OLFML2BQ68BL8 750 aa15.57■□□□□ 0.08
CLK3-209ENST00000562670 CCDC62Q6P9F0 684 aa15.57■□□□□ 0.08
CLK3-209ENST00000562670 GRAMD1CQ8IYS0 662 aa15.57■□□□□ 0.08
CLK3-209ENST00000562670 DYDC2Q96IM9 177 aa15.57■□□□□ 0.08
CLK3-209ENST00000562670 UIMC1Q96RL1 719 aa15.57■□□□□ 0.08
CLK3-209ENST00000562670 APBA2Q99767 749 aa15.57■□□□□ 0.08
CLK3-209ENST00000562670 BPIFA3Q9BQP9 254 aa15.57■□□□□ 0.08
CLK3-209ENST00000562670 ZSWIM4Q9H7M6 989 aa15.57■□□□□ 0.08
CLK3-209ENST00000562670 KCND2Q9NZV8 630 aa15.57■□□□□ 0.08
CLK3-209ENST00000562670 MAN1B1Q9UKM7 699 aa15.57■□□□□ 0.08
CLK3-209ENST00000562670 DNM3Q9UQ16 869 aa15.57■□□□□ 0.08
CLK3-209ENST00000562670 PCDHA10Q9Y5I2 948 aa15.57■□□□□ 0.08
CLK3-209ENST00000562670 PVALEFA0A1B0GWK0 134 aa15.56■□□□□ 0.08
CLK3-209ENST00000562670 FARP2O94887 1054 aaPredicted RBP15.56■□□□□ 0.08
CLK3-209ENST00000562670 ATG7O95352 703 aa15.56■□□□□ 0.08
CLK3-209ENST00000562670 PLA2G4BP0C869 781 aa15.56■□□□□ 0.08
CLK3-209ENST00000562670 XRCC6P12956 609 aaKnown RBP eCLIP15.56■□□□□ 0.08
CLK3-209ENST00000562670 QARSP47897 775 aaKnown RBP15.56■□□□□ 0.08
CLK3-209ENST00000562670 SLC12A3P55017 1021 aa15.56■□□□□ 0.08
CLK3-209ENST00000562670 FCGRTP55899 365 aa15.56■□□□□ 0.08
CLK3-209ENST00000562670 GRM1Q13255 1194 aa15.56■□□□□ 0.08
CLK3-209ENST00000562670 CUL4BQ13620 913 aa15.56■□□□□ 0.08
CLK3-209ENST00000562670 TTLL4Q14679 1199 aa15.56■□□□□ 0.08
CLK3-209ENST00000562670 SEPT14Q6ZU15 432 aa15.56■□□□□ 0.08
CLK3-209ENST00000562670 C4orf19Q8IY42 314 aa15.56■□□□□ 0.08
CLK3-209ENST00000562670 SYT2Q8N9I0 419 aaPredicted RBP15.56■□□□□ 0.08
CLK3-209ENST00000562670 FAM200AQ8TCP9 573 aa15.56■□□□□ 0.08
CLK3-209ENST00000562670 NACC1Q96RE7 527 aa15.56■□□□□ 0.08
CLK3-209ENST00000562670 PLIN2Q99541 437 aa15.56■□□□□ 0.08
CLK3-209ENST00000562670 TINF2Q9BSI4 451 aa15.56■□□□□ 0.08
CLK3-209ENST00000562670 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.56■□□□□ 0.08
CLK3-209ENST00000562670 RGL1Q9NZL6 768 aa15.56■□□□□ 0.08
CLK3-209ENST00000562670 PKD2L1Q9P0L9 805 aa15.56■□□□□ 0.08
CLK3-209ENST00000562670 DDX41Q9UJV9 622 aaKnown RBP15.56■□□□□ 0.08
CLK3-209ENST00000562670 DBR1Q9UK59 544 aaKnown RBP15.56■□□□□ 0.08
CLK3-209ENST00000562670 GJD2Q9UKL4 321 aa15.56■□□□□ 0.08
CLK3-209ENST00000562670 IGSF9BQ9UPX0 1349 aa15.56■□□□□ 0.08
CLK3-209ENST00000562670 CASP8AP2Q9UKL3 1982 aa15.56■□□□□ 0.08
CLK3-209ENST00000562670 MCM3APO60318 1980 aa15.55■□□□□ 0.08
CLK3-209ENST00000562670 DDX39AO00148 427 aaKnown RBP15.55■□□□□ 0.08
CLK3-209ENST00000562670 TNPO2O14787 897 aaKnown RBP15.55■□□□□ 0.08
CLK3-209ENST00000562670 RHOBTB3O94955 611 aa15.55■□□□□ 0.08
CLK3-209ENST00000562670 RPN1P04843 607 aaKnown RBP15.55■□□□□ 0.08
CLK3-209ENST00000562670 PSAPP07602 524 aa15.55■□□□□ 0.08
CLK3-209ENST00000562670 SUPT20HL2P0C7V6 817 aa15.55■□□□□ 0.08
CLK3-209ENST00000562670 XRCC5P13010 732 aaKnown RBP15.55■□□□□ 0.08
CLK3-209ENST00000562670 ACTR2P61160 394 aa15.55■□□□□ 0.08
CLK3-209ENST00000562670 PSMC5P62195 406 aa15.55■□□□□ 0.08
CLK3-209ENST00000562670 LACTBP83111 547 aaPredicted RBP15.55■□□□□ 0.08
CLK3-209ENST00000562670 SP2Q02086 613 aa15.55■□□□□ 0.08
CLK3-209ENST00000562670 CYP4A11Q02928 519 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms