RNA–Protein interactions for RNA: ENST00000562136.1

HERC2-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 2

Gene HERC2, Length 632 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-202ENST00000562136 SETD4Q9NVD3 440 aa14.43□□□□□ -0.1
HERC2-202ENST00000562136 ZNF215Q9UL58 517 aaPredicted RBP14.43□□□□□ -0.1
HERC2-202ENST00000562136 UBIAD1Q9Y5Z9 338 aa14.43□□□□□ -0.1
HERC2-202ENST00000562136 NRCAMQ92823 1304 aa14.42□□□□□ -0.1
HERC2-202ENST00000562136 MBLAC1A4D2B0 266 aaPredicted RBP14.42□□□□□ -0.1
HERC2-202ENST00000562136 RBAK-RBAKDNI3L0D1 243 aa14.42□□□□□ -0.1
HERC2-202ENST00000562136 MAFGO15525 162 aa14.42□□□□□ -0.1
HERC2-202ENST00000562136 ATP9AO75110 1047 aa14.42□□□□□ -0.1
HERC2-202ENST00000562136 NLRX1Q86UT6 975 aa14.42□□□□□ -0.1
HERC2-202ENST00000562136 TRIM50Q86XT4 487 aa14.42□□□□□ -0.1
HERC2-202ENST00000562136 IL27Q8NEV9 243 aa14.42□□□□□ -0.1
HERC2-202ENST00000562136 SEPT8Q92599 483 aa14.42□□□□□ -0.1
HERC2-202ENST00000562136 APBB2Q92870 758 aa14.42□□□□□ -0.1
HERC2-202ENST00000562136 SAMD11Q96NU1 681 aa14.42□□□□□ -0.1
HERC2-202ENST00000562136 PSTPIP2Q9H939 334 aa14.42□□□□□ -0.1
HERC2-202ENST00000562136 SEC63Q9UGP8 760 aaKnown RBP14.42□□□□□ -0.1
HERC2-202ENST00000562136 GSTTP1A0A1W2PQM5 241 aa14.41□□□□□ -0.1
HERC2-202ENST00000562136 CHRNA1P02708 482 aa14.41□□□□□ -0.1
HERC2-202ENST00000562136 COL19A1Q14993 1142 aa14.41□□□□□ -0.1
HERC2-202ENST00000562136 SKIV2LQ15477 1246 aaKnown RBP14.41□□□□□ -0.1
HERC2-202ENST00000562136 CREB3L3Q68CJ9 461 aa14.41□□□□□ -0.1
HERC2-202ENST00000562136 TMTC3Q6ZXV5 915 aa14.41□□□□□ -0.1
HERC2-202ENST00000562136 FANCBQ8NB91 859 aa14.41□□□□□ -0.1
HERC2-202ENST00000562136 PIBF1Q8WXW3 757 aa14.41□□□□□ -0.1
HERC2-202ENST00000562136 CCDC69A6NI79 296 aa14.4□□□□□ -0.1
HERC2-202ENST00000562136 COL9A1P20849 921 aa14.4□□□□□ -0.1
HERC2-202ENST00000562136 TCF7P36402 384 aaPredicted RBP14.4□□□□□ -0.1
HERC2-202ENST00000562136 MGAT3Q09327 533 aa14.4□□□□□ -0.1
HERC2-202ENST00000562136 FUT2Q10981 343 aa14.4□□□□□ -0.1
HERC2-202ENST00000562136 TSGA10IPQ3SY00 556 aa14.4□□□□□ -0.1
HERC2-202ENST00000562136 MARCH8Q5T0T0 291 aa14.4□□□□□ -0.1
HERC2-202ENST00000562136 TAF2Q6P1X5 1199 aa14.4□□□□□ -0.1
HERC2-202ENST00000562136 MYOCDQ8IZQ8 938 aa14.4□□□□□ -0.1
HERC2-202ENST00000562136 SEPT1Q8WYJ6 367 aa14.4□□□□□ -0.1
HERC2-202ENST00000562136 C17orf80Q9BSJ5 609 aa14.4□□□□□ -0.1
HERC2-202ENST00000562136 RC3H2Q9HBD1 1191 aaKnown RBP14.4□□□□□ -0.1
HERC2-202ENST00000562136 JADE2Q9NQC1 790 aa14.4□□□□□ -0.1
HERC2-202ENST00000562136 WDR81Q562E7 1941 aa14.39□□□□□ -0.11
HERC2-202ENST00000562136 H3BNC9 293 aa14.39□□□□□ -0.11
HERC2-202ENST00000562136 LINC00271P0C7V0 271 aa14.39□□□□□ -0.11
HERC2-202ENST00000562136 ARHGAP4P98171 946 aa14.39□□□□□ -0.11
HERC2-202ENST00000562136 EXOSC10Q01780 885 aaKnown RBP14.39□□□□□ -0.11
HERC2-202ENST00000562136 EPC2Q52LR7 807 aa14.39□□□□□ -0.11
HERC2-202ENST00000562136 FAM117BQ6P1L5 589 aa14.39□□□□□ -0.11
HERC2-202ENST00000562136 CMTR1Q8N1G2 835 aaKnown RBP14.39□□□□□ -0.11
HERC2-202ENST00000562136 CRIPAKQ8N1N5 446 aa14.39□□□□□ -0.11
HERC2-202ENST00000562136 FBXO22Q8NEZ5 403 aa14.39□□□□□ -0.11
HERC2-202ENST00000562136 MRPL38Q96DV4 380 aaKnown RBP14.39□□□□□ -0.11
HERC2-202ENST00000562136 ERAP1Q9NZ08 941 aa14.39□□□□□ -0.11
HERC2-202ENST00000562136 MTUS1Q9ULD2 1270 aa14.39□□□□□ -0.11
HERC2-202ENST00000562136 SLC12A7Q9Y666 1083 aa14.39□□□□□ -0.11
HERC2-202ENST00000562136 RPLP2P05387 115 aaKnown RBP14.38□□□□□ -0.11
HERC2-202ENST00000562136 CTSHP09668 335 aa14.38□□□□□ -0.11
HERC2-202ENST00000562136 RXRAP19793 462 aa14.38□□□□□ -0.11
HERC2-202ENST00000562136 IRX6P78412 446 aaPredicted RBP14.38□□□□□ -0.11
HERC2-202ENST00000562136 MTMR1Q13613 665 aa14.38□□□□□ -0.11
HERC2-202ENST00000562136 LEXMQ3ZCV2 418 aa14.38□□□□□ -0.11
HERC2-202ENST00000562136 BMP2KLQ5H9B9 411 aa14.38□□□□□ -0.11
HERC2-202ENST00000562136 UTP14CQ5TAP6 766 aaKnown RBP14.38□□□□□ -0.11
HERC2-202ENST00000562136 NFXL1Q6ZNB6 911 aa14.38□□□□□ -0.11
HERC2-202ENST00000562136 RUFY4Q6ZNE9 571 aa14.38□□□□□ -0.11
HERC2-202ENST00000562136 PCYT2Q99447 389 aa14.38□□□□□ -0.11
HERC2-202ENST00000562136 C1QTNF1Q9BXJ1 281 aa14.38□□□□□ -0.11
HERC2-202ENST00000562136 IFIH1Q9BYX4 1025 aaKnown RBP14.38□□□□□ -0.11
HERC2-202ENST00000562136 SMARCAD1Q9H4L7 1026 aa14.38□□□□□ -0.11
HERC2-202ENST00000562136 UBE2ZQ9H832 354 aaPredicted RBP14.38□□□□□ -0.11
HERC2-202ENST00000562136 PCDHA6Q9UN73 950 aa14.38□□□□□ -0.11
HERC2-202ENST00000562136 PCDHA8Q9Y5H6 950 aa14.38□□□□□ -0.11
HERC2-202ENST00000562136 SQORQ9Y6N5 450 aa14.38□□□□□ -0.11
HERC2-202ENST00000562136 NFASCO94856 1347 aa14.38□□□□□ -0.11
HERC2-202ENST00000562136 CNTNAP5Q8WYK1 1306 aa14.38□□□□□ -0.11
HERC2-202ENST00000562136 C5orf67F2Z3F1 127 aa14.37□□□□□ -0.11
HERC2-202ENST00000562136 LPIN1Q14693 890 aa14.37□□□□□ -0.11
HERC2-202ENST00000562136 GRIK4Q16099 956 aa14.37□□□□□ -0.11
HERC2-202ENST00000562136 UBE2SQ16763 222 aa14.37□□□□□ -0.11
HERC2-202ENST00000562136 TYW1BQ6NUM6 668 aa14.37□□□□□ -0.11
HERC2-202ENST00000562136 PPP1R18Q6NYC8 613 aa14.37□□□□□ -0.11
HERC2-202ENST00000562136 APOA5Q6Q788 366 aa14.37□□□□□ -0.11
HERC2-202ENST00000562136 TMEM192Q8IY95 271 aa14.37□□□□□ -0.11
HERC2-202ENST00000562136 NEK9Q8TD19 979 aa14.37□□□□□ -0.11
HERC2-202ENST00000562136 RIC8AQ9NPQ8 531 aa14.37□□□□□ -0.11
HERC2-202ENST00000562136 KIAA1671Q9BY89 1806 aa14.36□□□□□ -0.11
HERC2-202ENST00000562136 EVPLQ92817 2033 aa14.36□□□□□ -0.11
HERC2-202ENST00000562136 C5orf42Q9H799 3197 aa14.36□□□□□ -0.11
HERC2-202ENST00000562136 hCG_1642624A0A1W2PR95 340 aa14.36□□□□□ -0.11
HERC2-202ENST00000562136 SPDYE3A6NKU9 549 aa14.36□□□□□ -0.11
HERC2-202ENST00000562136 ATG7O95352 703 aa14.36□□□□□ -0.11
HERC2-202ENST00000562136 RCAN1P53805 252 aa14.36□□□□□ -0.11
HERC2-202ENST00000562136 PPFIA1Q13136 1202 aa14.36□□□□□ -0.11
HERC2-202ENST00000562136 FBXO47Q5MNV8 452 aa14.36□□□□□ -0.11
HERC2-202ENST00000562136 WWC2Q6AWC2 1192 aa14.36□□□□□ -0.11
HERC2-202ENST00000562136 FAM43BQ6ZT52 329 aaPredicted RBP14.36□□□□□ -0.11
HERC2-202ENST00000562136 PLPPR4Q7Z2D5 763 aa14.36□□□□□ -0.11
HERC2-202ENST00000562136 CLP1Q92989 425 aaKnown RBP14.36□□□□□ -0.11
HERC2-202ENST00000562136 ZNF689Q96CS4 500 aaPredicted RBP14.36□□□□□ -0.11
HERC2-202ENST00000562136 YME1L1Q96TA2 773 aa14.36□□□□□ -0.11
HERC2-202ENST00000562136 MXRA8Q9BRK3 442 aa14.36□□□□□ -0.11
HERC2-202ENST00000562136 LRRC2Q9BYS8 371 aa14.36□□□□□ -0.11
HERC2-202ENST00000562136 KCNH7Q9NS40 1196 aa14.36□□□□□ -0.11
HERC2-202ENST00000562136 FAM217BQ9NTX9 383 aaPredicted RBP14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms