RNA–Protein interactions for RNA: ENST00000561992.5

TCF4-211, Transcript of transcription factor 4, humanhuman

TSL 2 BASIC

Gene TCF4, Length 2,184 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-211ENST00000561992 SYCE1Q8N0S2 351 aa10.84□□□□□ -0.67
TCF4-211ENST00000561992 RASGEF1CQ8N431 466 aa10.84□□□□□ -0.67
TCF4-211ENST00000561992 LARP4BQ92615 738 aaKnown RBP10.84□□□□□ -0.67
TCF4-211ENST00000561992 GPKOWQ92917 476 aaPredicted RBP eCLIP10.84□□□□□ -0.67
TCF4-211ENST00000561992 NSUN4Q96CB9 384 aaKnown RBP10.84□□□□□ -0.67
TCF4-211ENST00000561992 PSMB7Q99436 277 aa10.84□□□□□ -0.67
TCF4-211ENST00000561992 MMTAG2Q9BU76 263 aaKnown RBP10.84□□□□□ -0.67
TCF4-211ENST00000561992 ZNF219Q9P2Y4 722 aaPredicted RBP10.84□□□□□ -0.67
TCF4-211ENST00000561992 TTC7AQ9ULT0 858 aaPredicted RBP10.84□□□□□ -0.67
TCF4-211ENST00000561992 MYH1P12882 1939 aa10.84□□□□□ -0.67
TCF4-211ENST00000561992 SLIT2O94813 1529 aa10.84□□□□□ -0.67
TCF4-211ENST00000561992 ADAMTS3O15072 1205 aa10.84□□□□□ -0.67
TCF4-211ENST00000561992 MGRN1O60291 552 aa10.84□□□□□ -0.67
TCF4-211ENST00000561992 GFPT2O94808 682 aa10.84□□□□□ -0.67
TCF4-211ENST00000561992 SLC8A3P57103 927 aa10.84□□□□□ -0.67
TCF4-211ENST00000561992 ERVK-9P63128 1117 aa10.84□□□□□ -0.67
TCF4-211ENST00000561992 HLTFQ14527 1009 aaKnown RBP eCLIP10.84□□□□□ -0.67
TCF4-211ENST00000561992 ASIC2Q16515 512 aa10.84□□□□□ -0.67
TCF4-211ENST00000561992 KIAA0753Q2KHM9 967 aa10.84□□□□□ -0.67
TCF4-211ENST00000561992 ZC3H3Q8IXZ2 948 aaKnown RBP10.84□□□□□ -0.67
TCF4-211ENST00000561992 RAD54LQ92698 747 aa10.84□□□□□ -0.67
TCF4-211ENST00000561992 CDK5RAP3Q96JB5 506 aa10.84□□□□□ -0.67
TCF4-211ENST00000561992 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.84□□□□□ -0.67
TCF4-211ENST00000561992 CD248Q9HCU0 757 aa10.84□□□□□ -0.67
TCF4-211ENST00000561992 SLC39A2Q9NP94 309 aa10.84□□□□□ -0.67
TCF4-211ENST00000561992 PPANQ9NQ55 473 aaKnown RBP10.84□□□□□ -0.67
TCF4-211ENST00000561992 BATF3Q9NR55 127 aa10.84□□□□□ -0.67
TCF4-211ENST00000561992 CFAP73A6NFT4 308 aa10.83□□□□□ -0.68
TCF4-211ENST00000561992 ASAP2O43150 1006 aa10.83□□□□□ -0.68
TCF4-211ENST00000561992 CCNT1O60563 726 aaKnown RBP10.83□□□□□ -0.68
TCF4-211ENST00000561992 KLRC1P26715 233 aa10.83□□□□□ -0.68
TCF4-211ENST00000561992 CALRP27797 417 aaKnown RBP10.83□□□□□ -0.68
TCF4-211ENST00000561992 GBP1P32455 592 aa10.83□□□□□ -0.68
TCF4-211ENST00000561992 SCTRP47872 440 aa10.83□□□□□ -0.68
TCF4-211ENST00000561992 GRB10Q13322 594 aa10.83□□□□□ -0.68
TCF4-211ENST00000561992 HEATR3Q7Z4Q2 680 aa10.83□□□□□ -0.68
TCF4-211ENST00000561992 FMNL3Q8IVF7 1028 aa10.83□□□□□ -0.68
TCF4-211ENST00000561992 ANKRD13CQ8N6S4 541 aa10.83□□□□□ -0.68
TCF4-211ENST00000561992 ANKS4BQ8N8V4 417 aa10.83□□□□□ -0.68
TCF4-211ENST00000561992 RASGRP4Q8TDF6 673 aa10.83□□□□□ -0.68
TCF4-211ENST00000561992 MTMR9Q96QG7 549 aa10.83□□□□□ -0.68
TCF4-211ENST00000561992 PLIN2Q99541 437 aa10.83□□□□□ -0.68
TCF4-211ENST00000561992 OSBPL7Q9BZF2 842 aa10.83□□□□□ -0.68
TCF4-211ENST00000561992 ZNF287Q9HBT7 754 aa10.83□□□□□ -0.68
TCF4-211ENST00000561992 BLOC1S4Q9NUP1 217 aa10.83□□□□□ -0.68
TCF4-211ENST00000561992 ESYT3A0FGR9 886 aa10.83□□□□□ -0.68
TCF4-211ENST00000561992 MYMKA6NI61 221 aa10.83□□□□□ -0.68
TCF4-211ENST00000561992 TLR2O60603 784 aa10.83□□□□□ -0.68
TCF4-211ENST00000561992 NOL4O94818 638 aa10.83□□□□□ -0.68
TCF4-211ENST00000561992 VEGFAP15692 232 aaPredicted RBP10.83□□□□□ -0.68
TCF4-211ENST00000561992 KLHL30Q0D2K2 578 aa10.83□□□□□ -0.68
TCF4-211ENST00000561992 UAP1Q16222 522 aaPredicted RBP10.83□□□□□ -0.68
TCF4-211ENST00000561992 TMEM119Q4V9L6 283 aa10.83□□□□□ -0.68
TCF4-211ENST00000561992 FAM47AQ5JRC9 791 aa10.83□□□□□ -0.68
TCF4-211ENST00000561992 SOGA3Q5TF21 947 aa10.83□□□□□ -0.68
TCF4-211ENST00000561992 SPTY2D1Q68D10 685 aaPredicted RBP10.83□□□□□ -0.68
TCF4-211ENST00000561992 FBXO33Q7Z6M2 555 aa10.83□□□□□ -0.68
TCF4-211ENST00000561992 TRIM59Q8IWR1 403 aa10.83□□□□□ -0.68
TCF4-211ENST00000561992 CCT6BQ92526 530 aa10.83□□□□□ -0.68
TCF4-211ENST00000561992 TBC1D5Q92609 795 aa10.83□□□□□ -0.68
TCF4-211ENST00000561992 MIEF2Q96C03 454 aa10.83□□□□□ -0.68
TCF4-211ENST00000561992 TLCD1Q96CP7 247 aa10.83□□□□□ -0.68
TCF4-211ENST00000561992 HOOK2Q96ED9 719 aa10.83□□□□□ -0.68
TCF4-211ENST00000561992 CCDC97Q96F63 343 aaPredicted RBP10.83□□□□□ -0.68
TCF4-211ENST00000561992 HINFPQ9BQA5 517 aa10.83□□□□□ -0.68
TCF4-211ENST00000561992 TANGO6Q9C0B7 1094 aa10.83□□□□□ -0.68
TCF4-211ENST00000561992 BSDC1Q9NW68 430 aaPredicted RBP10.83□□□□□ -0.68
TCF4-211ENST00000561992 SUCLA2Q9P2R7 463 aaPredicted RBP10.83□□□□□ -0.68
TCF4-211ENST00000561992 FBXL5Q9UKA1 691 aa10.83□□□□□ -0.68
TCF4-211ENST00000561992 LEMD3Q9Y2U8 911 aa10.83□□□□□ -0.68
TCF4-211ENST00000561992 ATAD5Q96QE3 1844 aa10.82□□□□□ -0.68
TCF4-211ENST00000561992 ZSCAN5CA6NGD5 496 aaPredicted RBP10.82□□□□□ -0.68
TCF4-211ENST00000561992 NMT2O60551 498 aa10.82□□□□□ -0.68
TCF4-211ENST00000561992 NTSR2O95665 410 aa10.82□□□□□ -0.68
TCF4-211ENST00000561992 FTCDO95954 541 aa10.82□□□□□ -0.68
TCF4-211ENST00000561992 HPDP32754 393 aaPredicted RBP10.82□□□□□ -0.68
TCF4-211ENST00000561992 MRPS25P82663 173 aaKnown RBP10.82□□□□□ -0.68
TCF4-211ENST00000561992 TFAP4Q01664 338 aa10.82□□□□□ -0.68
TCF4-211ENST00000561992 BYSLQ13895 437 aaKnown RBP10.82□□□□□ -0.68
TCF4-211ENST00000561992 ODF2Q5BJF6 829 aa10.82□□□□□ -0.68
TCF4-211ENST00000561992 SLFN11Q7Z7L1 901 aa10.82□□□□□ -0.68
TCF4-211ENST00000561992 TEX11Q8IYF3 940 aa10.82□□□□□ -0.68
TCF4-211ENST00000561992 CCDC197Q8NCU1 140 aa10.82□□□□□ -0.68
TCF4-211ENST00000561992 RAPGEF5Q92565 580 aa10.82□□□□□ -0.68
TCF4-211ENST00000561992 CHMP6Q96FZ7 201 aa10.82□□□□□ -0.68
TCF4-211ENST00000561992 LSM14BQ9BX40 385 aaKnown RBP10.82□□□□□ -0.68
TCF4-211ENST00000561992 MOV10L1Q9BXT6 1211 aaKnown RBP10.82□□□□□ -0.68
TCF4-211ENST00000561992 RAB17Q9H0T7 212 aa10.82□□□□□ -0.68
TCF4-211ENST00000561992 CCDC134Q9H6E4 229 aa10.82□□□□□ -0.68
TCF4-211ENST00000561992 BMP2KQ9NSY1 1161 aaPredicted RBP10.82□□□□□ -0.68
TCF4-211ENST00000561992 PHLPP1O60346 1717 aa10.82□□□□□ -0.68
TCF4-211ENST00000561992 ITGB4P16144 1822 aa10.82□□□□□ -0.68
TCF4-211ENST00000561992 SMIM22K7EJ46 135 aa10.82□□□□□ -0.68
TCF4-211ENST00000561992 SNAP23O00161 211 aa10.82□□□□□ -0.68
TCF4-211ENST00000561992 KCNK3O14649 394 aa10.82□□□□□ -0.68
TCF4-211ENST00000561992 SART1O43290 800 aaKnown RBP10.82□□□□□ -0.68
TCF4-211ENST00000561992 PPFIA2O75334 1257 aa10.82□□□□□ -0.68
TCF4-211ENST00000561992 NUDT17P0C025 328 aa10.82□□□□□ -0.68
TCF4-211ENST00000561992 DRD4P21917 467 aa10.82□□□□□ -0.68
TCF4-211ENST00000561992 PRKCIP41743 596 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms