RNA–Protein interactions for RNA: ENST00000561945.1

SPG7-205, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 411 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-205ENST00000561945 MYL10Q9BUA6 226 aa16.75■□□□□ 0.27
SPG7-205ENST00000561945 EHMT1Q9H9B1 1298 aa16.75■□□□□ 0.27
SPG7-205ENST00000561945 KAT6AQ92794 2004 aa16.75■□□□□ 0.27
SPG7-205ENST00000561945 MAFGO15525 162 aa16.74■□□□□ 0.27
SPG7-205ENST00000561945 PLEKHA8P1O95397 391 aa16.74■□□□□ 0.27
SPG7-205ENST00000561945 COL9A3Q14050 684 aaPredicted RBP16.74■□□□□ 0.27
SPG7-205ENST00000561945 COL19A1Q14993 1142 aa16.74■□□□□ 0.27
SPG7-205ENST00000561945 NECTIN1Q15223 517 aa16.74■□□□□ 0.27
SPG7-205ENST00000561945 CASC1Q6TDU7 716 aa16.74■□□□□ 0.27
SPG7-205ENST00000561945 MYOCDQ8IZQ8 938 aa16.74■□□□□ 0.27
SPG7-205ENST00000561945 SEC63Q9UGP8 760 aaKnown RBP16.74■□□□□ 0.27
SPG7-205ENST00000561945 UBIAD1Q9Y5Z9 338 aa16.74■□□□□ 0.27
SPG7-205ENST00000561945 ATG2AQ2TAZ0 1938 aa16.74■□□□□ 0.27
SPG7-205ENST00000561945 MBLAC1A4D2B0 266 aaPredicted RBP16.73■□□□□ 0.27
SPG7-205ENST00000561945 H3BNC9 293 aa16.73■□□□□ 0.27
SPG7-205ENST00000561945 ATP9AO75110 1047 aa16.73■□□□□ 0.27
SPG7-205ENST00000561945 ITGB5P18084 799 aa16.73■□□□□ 0.27
SPG7-205ENST00000561945 TCF7P36402 384 aaPredicted RBP16.73■□□□□ 0.27
SPG7-205ENST00000561945 MGAT3Q09327 533 aa16.73■□□□□ 0.27
SPG7-205ENST00000561945 LEXMQ3ZCV2 418 aa16.73■□□□□ 0.27
SPG7-205ENST00000561945 FAM117BQ6P1L5 589 aa16.73■□□□□ 0.27
SPG7-205ENST00000561945 TAF2Q6P1X5 1199 aa16.73■□□□□ 0.27
SPG7-205ENST00000561945 SGMS1Q86VZ5 419 aa16.73■□□□□ 0.27
SPG7-205ENST00000561945 FBXO22Q8NEZ5 403 aa16.73■□□□□ 0.27
SPG7-205ENST00000561945 PIBF1Q8WXW3 757 aa16.73■□□□□ 0.27
SPG7-205ENST00000561945 MRPL38Q96DV4 380 aaKnown RBP16.73■□□□□ 0.27
SPG7-205ENST00000561945 UBE2ZQ9H832 354 aaPredicted RBP16.73■□□□□ 0.27
SPG7-205ENST00000561945 PSTPIP2Q9H939 334 aa16.73■□□□□ 0.27
SPG7-205ENST00000561945 RC3H2Q9HBD1 1191 aaKnown RBP16.73■□□□□ 0.27
SPG7-205ENST00000561945 MTUS1Q9ULD2 1270 aa16.73■□□□□ 0.27
SPG7-205ENST00000561945 GSTTP1A0A1W2PQM5 241 aa16.72■□□□□ 0.27
SPG7-205ENST00000561945 SLC27A2O14975 620 aa16.72■□□□□ 0.27
SPG7-205ENST00000561945 CHRNA1P02708 482 aa16.72■□□□□ 0.27
SPG7-205ENST00000561945 EPC2Q52LR7 807 aa16.72■□□□□ 0.27
SPG7-205ENST00000561945 MARCH8Q5T0T0 291 aa16.72■□□□□ 0.27
SPG7-205ENST00000561945 ARIH1Q9Y4X5 557 aaPredicted RBP16.72■□□□□ 0.27
SPG7-205ENST00000561945 CCDC69A6NI79 296 aa16.71■□□□□ 0.27
SPG7-205ENST00000561945 C5orf67F2Z3F1 127 aa16.71■□□□□ 0.27
SPG7-205ENST00000561945 CTSHP09668 335 aa16.71■□□□□ 0.27
SPG7-205ENST00000561945 LINC00271P0C7V0 271 aa16.71■□□□□ 0.27
SPG7-205ENST00000561945 ARHGAP4P98171 946 aa16.71■□□□□ 0.27
SPG7-205ENST00000561945 UTP14CQ5TAP6 766 aaKnown RBP16.71■□□□□ 0.27
SPG7-205ENST00000561945 TMTC3Q6ZXV5 915 aa16.71■□□□□ 0.27
SPG7-205ENST00000561945 NEK9Q8TD19 979 aa16.71■□□□□ 0.27
SPG7-205ENST00000561945 SEPT1Q8WYJ6 367 aa16.71■□□□□ 0.27
SPG7-205ENST00000561945 ESYT1Q9BSJ8 1104 aa16.71■□□□□ 0.27
SPG7-205ENST00000561945 IFIH1Q9BYX4 1025 aaKnown RBP16.71■□□□□ 0.27
SPG7-205ENST00000561945 JADE2Q9NQC1 790 aa16.71■□□□□ 0.27
SPG7-205ENST00000561945 ERAP1Q9NZ08 941 aa16.71■□□□□ 0.27
SPG7-205ENST00000561945 RPLP2P05387 115 aaKnown RBP16.7■□□□□ 0.26
SPG7-205ENST00000561945 PTPROQ16827 1216 aa16.7■□□□□ 0.26
SPG7-205ENST00000561945 CREB3L3Q68CJ9 461 aa16.7■□□□□ 0.26
SPG7-205ENST00000561945 CMTR1Q8N1G2 835 aaKnown RBP16.7■□□□□ 0.26
SPG7-205ENST00000561945 FANCBQ8NB91 859 aa16.7■□□□□ 0.26
SPG7-205ENST00000561945 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.7■□□□□ 0.26
SPG7-205ENST00000561945 KHSRPQ92945 711 aaKnown RBP eCLIP16.7■□□□□ 0.262e-7■■□□□ 11.6
SPG7-205ENST00000561945 YME1L1Q96TA2 773 aa16.7■□□□□ 0.26
SPG7-205ENST00000561945 TTC3P53804 2025 aa16.7■□□□□ 0.26
SPG7-205ENST00000561945 MTMR1Q13613 665 aa16.69■□□□□ 0.26
SPG7-205ENST00000561945 LPIN1Q14693 890 aa16.69■□□□□ 0.26
SPG7-205ENST00000561945 TIGD5Q53EQ6 642 aa16.69■□□□□ 0.26
SPG7-205ENST00000561945 NFXL1Q6ZNB6 911 aa16.69■□□□□ 0.26
SPG7-205ENST00000561945 RUFY4Q6ZNE9 571 aa16.69■□□□□ 0.26
SPG7-205ENST00000561945 TMEM192Q8IY95 271 aa16.69■□□□□ 0.26
SPG7-205ENST00000561945 CRIPAKQ8N1N5 446 aa16.69■□□□□ 0.26
SPG7-205ENST00000561945 ZNF689Q96CS4 500 aaPredicted RBP16.69■□□□□ 0.26
SPG7-205ENST00000561945 SMARCAD1Q9H4L7 1026 aa16.69■□□□□ 0.26
SPG7-205ENST00000561945 EPHX3Q9H6B9 360 aa16.69■□□□□ 0.26
SPG7-205ENST00000561945 CD320Q9NPF0 282 aa16.69■□□□□ 0.26
SPG7-205ENST00000561945 PCDHA6Q9UN73 950 aa16.69■□□□□ 0.26
SPG7-205ENST00000561945 PCDHA8Q9Y5H6 950 aa16.69■□□□□ 0.26
SPG7-205ENST00000561945 SLC12A7Q9Y666 1083 aa16.69■□□□□ 0.26
SPG7-205ENST00000561945 SQORQ9Y6N5 450 aa16.69■□□□□ 0.26
SPG7-205ENST00000561945 C5orf42Q9H799 3197 aa16.69■□□□□ 0.26
SPG7-205ENST00000561945 NFASCO94856 1347 aa16.69■□□□□ 0.26
SPG7-205ENST00000561945 MYO7AQ13402 2215 aa16.68■□□□□ 0.26
SPG7-205ENST00000561945 SPDYE3A6NKU9 549 aa16.68■□□□□ 0.26
SPG7-205ENST00000561945 PI4K2BG5E9Z4 385 aa16.68■□□□□ 0.26
SPG7-205ENST00000561945 GPR37L1O60883 481 aa16.68■□□□□ 0.26
SPG7-205ENST00000561945 RB1P06400 928 aa16.68■□□□□ 0.26
SPG7-205ENST00000561945 RXRAP19793 462 aa16.68■□□□□ 0.26
SPG7-205ENST00000561945 FUT2Q10981 343 aa16.68■□□□□ 0.26
SPG7-205ENST00000561945 PPFIA1Q13136 1202 aa16.68■□□□□ 0.26
SPG7-205ENST00000561945 GRIK4Q16099 956 aa16.68■□□□□ 0.26
SPG7-205ENST00000561945 PUS10Q3MIT2 529 aaKnown RBP16.68■□□□□ 0.26
SPG7-205ENST00000561945 FBXO47Q5MNV8 452 aa16.68■□□□□ 0.26
SPG7-205ENST00000561945 FAM43BQ6ZT52 329 aaPredicted RBP16.68■□□□□ 0.26
SPG7-205ENST00000561945 FAM178BQ8IXR5 827 aa16.68■□□□□ 0.26
SPG7-205ENST00000561945 CLP1Q92989 425 aaKnown RBP16.68■□□□□ 0.26
SPG7-205ENST00000561945 PCYT2Q99447 389 aa16.68■□□□□ 0.26
SPG7-205ENST00000561945 TUBE1Q9UJT0 475 aa16.68■□□□□ 0.26
SPG7-205ENST00000561945 RRN3P2A6NIE6 340 aa16.67■□□□□ 0.26
SPG7-205ENST00000561945 ENPP3O14638 875 aa16.67■□□□□ 0.26
SPG7-205ENST00000561945 SP4Q02446 784 aa16.67■□□□□ 0.26
SPG7-205ENST00000561945 GPM6BQ13491 265 aa16.67■□□□□ 0.26
SPG7-205ENST00000561945 UBE2SQ16763 222 aa16.67■□□□□ 0.26
SPG7-205ENST00000561945 TSGA10IPQ3SY00 556 aa16.67■□□□□ 0.26
SPG7-205ENST00000561945 PPP1R18Q6NYC8 613 aa16.67■□□□□ 0.26
SPG7-205ENST00000561945 RSPH3Q86UC2 560 aa16.67■□□□□ 0.26
SPG7-205ENST00000561945 BANK1Q8NDB2 785 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms