RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 CRIPAKQ8N1N5 446 aa7.35□□□□□ -1.23
CAPN3-210ENST00000561817 MLKLQ8NB16 471 aa7.35□□□□□ -1.23
CAPN3-210ENST00000561817 STAMQ92783 540 aa7.35□□□□□ -1.23
CAPN3-210ENST00000561817 GJA10Q969M2 543 aa7.35□□□□□ -1.23
CAPN3-210ENST00000561817 CCDC102AQ96A19 550 aa7.35□□□□□ -1.23
CAPN3-210ENST00000561817 WNK4Q96J92 1243 aa7.35□□□□□ -1.23
CAPN3-210ENST00000561817 AGBL1Q96MI9 1066 aa7.35□□□□□ -1.23
CAPN3-210ENST00000561817 GSDMAQ96QA5 445 aa7.35□□□□□ -1.23
CAPN3-210ENST00000561817 FEZ1Q99689 392 aa7.35□□□□□ -1.23
CAPN3-210ENST00000561817 NAT10Q9H0A0 1025 aaKnown RBP7.35□□□□□ -1.23
CAPN3-210ENST00000561817 CUEDC2Q9H467 287 aa7.35□□□□□ -1.23
CAPN3-210ENST00000561817 RPAP3Q9H6T3 665 aaPredicted RBP7.35□□□□□ -1.23
CAPN3-210ENST00000561817 COL20A1Q9P218 1284 aa7.35□□□□□ -1.23
CAPN3-210ENST00000561817 MRPL11Q9Y3B7 192 aaKnown RBP7.35□□□□□ -1.23
CAPN3-210ENST00000561817 LOC285556D6RIA3 1793 aa7.34□□□□□ -1.23
CAPN3-210ENST00000561817 RBBP6Q7Z6E9 1792 aaKnown RBP7.34□□□□□ -1.23
CAPN3-210ENST00000561817 TTC24A2A3L6 582 aaPredicted RBP7.34□□□□□ -1.23
CAPN3-210ENST00000561817 C19orf81C9J6K1 198 aa7.34□□□□□ -1.23
CAPN3-210ENST00000561817 GCOM1H8Y6P7 765 aaPredicted RBP7.34□□□□□ -1.23
CAPN3-210ENST00000561817 VWA5AO00534 786 aa7.34□□□□□ -1.23
CAPN3-210ENST00000561817 SLC26A4O43511 780 aa7.34□□□□□ -1.23
CAPN3-210ENST00000561817 SMC2O95347 1197 aa7.34□□□□□ -1.23
CAPN3-210ENST00000561817 MYL1P05976 194 aa7.34□□□□□ -1.23
CAPN3-210ENST00000561817 POLR2MP0CAP2 368 aa7.34□□□□□ -1.23
CAPN3-210ENST00000561817 FDX1P10109 184 aa7.34□□□□□ -1.23
CAPN3-210ENST00000561817 ZNF18P17022 549 aa7.34□□□□□ -1.23
CAPN3-210ENST00000561817 CDC25BP30305 580 aa7.34□□□□□ -1.23
CAPN3-210ENST00000561817 CLCN1P35523 988 aa7.34□□□□□ -1.23
CAPN3-210ENST00000561817 UBA7P41226 1012 aa7.34□□□□□ -1.23
CAPN3-210ENST00000561817 STAT6P42226 847 aa7.34□□□□□ -1.23
CAPN3-210ENST00000561817 TRIM32Q13049 653 aa7.34□□□□□ -1.23
CAPN3-210ENST00000561817 PRKG1Q13976 671 aa7.34□□□□□ -1.23
CAPN3-210ENST00000561817 VGLL4Q14135 290 aa7.34□□□□□ -1.23
CAPN3-210ENST00000561817 TTLL12Q14166 644 aaPredicted RBP7.34□□□□□ -1.23
CAPN3-210ENST00000561817 RRAGBQ5VZM2 374 aa7.34□□□□□ -1.23
CAPN3-210ENST00000561817 B3GNT9Q6UX72 402 aa7.34□□□□□ -1.23
CAPN3-210ENST00000561817 KRT26Q7Z3Y9 468 aa7.34□□□□□ -1.23
CAPN3-210ENST00000561817 KCNK18Q7Z418 384 aa7.34□□□□□ -1.23
CAPN3-210ENST00000561817 EXOC8Q8IYI6 725 aa7.34□□□□□ -1.23
CAPN3-210ENST00000561817 CYP2W1Q8TAV3 490 aa7.34□□□□□ -1.23
CAPN3-210ENST00000561817 ENOX1Q8TC92 643 aaKnown RBP7.34□□□□□ -1.23
CAPN3-210ENST00000561817 ANP32BQ92688 251 aaKnown RBP7.34□□□□□ -1.23
CAPN3-210ENST00000561817 MRFAP1L1Q96HT8 127 aa7.34□□□□□ -1.23
CAPN3-210ENST00000561817 C7orf25Q9BPX7 421 aa7.34□□□□□ -1.23
CAPN3-210ENST00000561817 BLZF1Q9H2G9 400 aa7.34□□□□□ -1.23
CAPN3-210ENST00000561817 TTC12Q9H892 705 aaPredicted RBP7.34□□□□□ -1.23
CAPN3-210ENST00000561817 MAGEF1Q9HAY2 307 aa7.34□□□□□ -1.23
CAPN3-210ENST00000561817 AS3MTQ9HBK9 375 aa7.34□□□□□ -1.23
CAPN3-210ENST00000561817 PICK1Q9NRD5 415 aa7.34□□□□□ -1.23
CAPN3-210ENST00000561817 LRWD1Q9UFC0 647 aa7.34□□□□□ -1.23
CAPN3-210ENST00000561817 VAV3Q9UKW4 847 aa7.34□□□□□ -1.23
CAPN3-210ENST00000561817 ZHX2Q9Y6X8 837 aa7.34□□□□□ -1.23
CAPN3-210ENST00000561817 A0A0G2JMZ2 1700 aa7.34□□□□□ -1.23
CAPN3-210ENST00000561817 COL11A1P12107 1806 aaPredicted RBP7.34□□□□□ -1.24
CAPN3-210ENST00000561817 SPDYE3A6NKU9 549 aa7.33□□□□□ -1.24
CAPN3-210ENST00000561817 SMTNL1A8MU46 457 aa7.33□□□□□ -1.24
CAPN3-210ENST00000561817 MEIS1O00470 390 aa7.33□□□□□ -1.24
CAPN3-210ENST00000561817 NFIBO00712 420 aa7.33□□□□□ -1.24
CAPN3-210ENST00000561817 ATP2A1O14983 1001 aa7.33□□□□□ -1.24
CAPN3-210ENST00000561817 AXIN1O15169 862 aa7.33□□□□□ -1.24
CAPN3-210ENST00000561817 MSH4O15457 936 aa7.33□□□□□ -1.24
CAPN3-210ENST00000561817 HOXA2O43364 376 aa7.33□□□□□ -1.24
CAPN3-210ENST00000561817 MARCH6O60337 910 aa7.33□□□□□ -1.24
CAPN3-210ENST00000561817 DXOO77932 396 aaKnown RBP7.33□□□□□ -1.24
CAPN3-210ENST00000561817 RPN1P04843 607 aaKnown RBP7.33□□□□□ -1.24
CAPN3-210ENST00000561817 TCF3P15923 654 aa7.33□□□□□ -1.24
CAPN3-210ENST00000561817 ERCC5P28715 1186 aaPredicted RBP7.33□□□□□ -1.24
CAPN3-210ENST00000561817 TXLNAP40222 546 aa7.33□□□□□ -1.24
CAPN3-210ENST00000561817 HMGCS2P54868 508 aa7.33□□□□□ -1.24
CAPN3-210ENST00000561817 C1QTNF8P60827 252 aa7.33□□□□□ -1.24
CAPN3-210ENST00000561817 HTRA3P83110 453 aa7.33□□□□□ -1.24
CAPN3-210ENST00000561817 MYL5Q02045 173 aa7.33□□□□□ -1.24
CAPN3-210ENST00000561817 SEMA3FQ13275 785 aa7.33□□□□□ -1.24
CAPN3-210ENST00000561817 MOGSQ13724 837 aa7.33□□□□□ -1.24
CAPN3-210ENST00000561817 KCNB1Q14721 858 aa7.33□□□□□ -1.24
CAPN3-210ENST00000561817 CTC1Q2NKJ3 1217 aa7.33□□□□□ -1.24
CAPN3-210ENST00000561817 MUM1L1Q5H9M0 696 aa7.33□□□□□ -1.24
CAPN3-210ENST00000561817 CATSPERGQ6ZRH7 1159 aa7.33□□□□□ -1.24
CAPN3-210ENST00000561817 APTXQ7Z2E3 356 aaKnown RBP7.33□□□□□ -1.24
CAPN3-210ENST00000561817 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.33□□□□□ -1.24
CAPN3-210ENST00000561817 SAMD3Q8N6K7 520 aa7.33□□□□□ -1.24
CAPN3-210ENST00000561817 SYTL5Q8TDW5 730 aaPredicted RBP7.33□□□□□ -1.24
CAPN3-210ENST00000561817 RAD54LQ92698 747 aa7.33□□□□□ -1.24
CAPN3-210ENST00000561817 SLC5A5Q92911 643 aa7.33□□□□□ -1.24
CAPN3-210ENST00000561817 ATG4CQ96DT6 458 aa7.33□□□□□ -1.24
CAPN3-210ENST00000561817 FAM20AQ96MK3 541 aa7.33□□□□□ -1.24
CAPN3-210ENST00000561817 PLIN2Q99541 437 aa7.33□□□□□ -1.24
CAPN3-210ENST00000561817 TRIM9Q9C026 710 aa7.33□□□□□ -1.24
CAPN3-210ENST00000561817 RAVER2Q9HCJ3 691 aaKnown RBP7.33□□□□□ -1.24
CAPN3-210ENST00000561817 RRAGDQ9NQL2 400 aaPredicted RBP7.33□□□□□ -1.24
CAPN3-210ENST00000561817 STK17AQ9UEE5 414 aa7.33□□□□□ -1.24
CAPN3-210ENST00000561817 CCDC39Q9UFE4 941 aa7.33□□□□□ -1.24
CAPN3-210ENST00000561817 ZNF214Q9UL59 606 aaPredicted RBP7.33□□□□□ -1.24
CAPN3-210ENST00000561817 CCPG1Q9ULG6 757 aa7.33□□□□□ -1.24
CAPN3-210ENST00000561817 ABT1Q9ULW3 272 aaKnown RBP7.33□□□□□ -1.24
CAPN3-210ENST00000561817 MYPNQ86TC9 1320 aa7.32□□□□□ -1.24
CAPN3-210ENST00000561817 MYMKA6NI61 221 aa7.32□□□□□ -1.24
CAPN3-210ENST00000561817 BECN2A8MW95 431 aa7.32□□□□□ -1.24
CAPN3-210ENST00000561817 GOLGA6L19H0YKK7 550 aa7.32□□□□□ -1.24
CAPN3-210ENST00000561817 PSMD10O75832 226 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms