RNA–Protein interactions for RNA: ENST00000561253.5

LRRC28-220, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-220ENST00000561253 RPS6KA4O75676 772 aa7.63□□□□□ -1.19
LRRC28-220ENST00000561253 KCNH1O95259 989 aa7.63□□□□□ -1.19
LRRC28-220ENST00000561253 A1BGP04217 495 aa7.63□□□□□ -1.19
LRRC28-220ENST00000561253 PPP2R2AP63151 447 aa7.63□□□□□ -1.19
LRRC28-220ENST00000561253 AOC3Q16853 763 aa7.63□□□□□ -1.19
LRRC28-220ENST00000561253 PROSER3Q2NL68 480 aa7.63□□□□□ -1.19
LRRC28-220ENST00000561253 THAP3Q8WTV1 239 aaPredicted RBP7.63□□□□□ -1.19
LRRC28-220ENST00000561253 ASB11Q8WXH4 323 aa7.63□□□□□ -1.19
LRRC28-220ENST00000561253 MISP3Q96FF7 219 aa7.63□□□□□ -1.19
LRRC28-220ENST00000561253 TCTN2Q96GX1 697 aa7.63□□□□□ -1.19
LRRC28-220ENST00000561253 TEX13AQ9BXU3 409 aaPredicted RBP7.63□□□□□ -1.19
LRRC28-220ENST00000561253 DUSP13Q9UII6 198 aa7.63□□□□□ -1.19
LRRC28-220ENST00000561253 RNF112Q9ULX5 631 aa7.63□□□□□ -1.19
LRRC28-220ENST00000561253 CASZ1Q86V15 1759 aa7.63□□□□□ -1.19
LRRC28-220ENST00000561253 QSER1Q2KHR3 1735 aa7.63□□□□□ -1.19
LRRC28-220ENST00000561253 WASH4PA8MWX3 477 aa7.62□□□□□ -1.19
LRRC28-220ENST00000561253 VAMP4O75379 141 aa7.62□□□□□ -1.19
LRRC28-220ENST00000561253 STARD3NLO95772 234 aa7.62□□□□□ -1.19
LRRC28-220ENST00000561253 AMPD2Q01433 879 aa7.62□□□□□ -1.19
LRRC28-220ENST00000561253 POU4F1Q01851 419 aa7.62□□□□□ -1.19
LRRC28-220ENST00000561253 GRB10Q13322 594 aa7.62□□□□□ -1.19
LRRC28-220ENST00000561253 R3HDM1Q15032 1099 aaKnown RBP7.62□□□□□ -1.19
LRRC28-220ENST00000561253 MSMPQ1L6U9 139 aa7.62□□□□□ -1.19
LRRC28-220ENST00000561253 C2orf27AQ580R0 203 aa7.62□□□□□ -1.19
LRRC28-220ENST00000561253 CRTC3Q6UUV7 619 aa7.62□□□□□ -1.19
LRRC28-220ENST00000561253 TMPRSS7Q7RTY8 843 aa7.62□□□□□ -1.19
LRRC28-220ENST00000561253 COL23A1Q86Y22 540 aaPredicted RBP7.62□□□□□ -1.19
LRRC28-220ENST00000561253 TRIM59Q8IWR1 403 aa7.62□□□□□ -1.19
LRRC28-220ENST00000561253 MRGPRX3Q96LB0 322 aa7.62□□□□□ -1.19
LRRC28-220ENST00000561253 RNPC3Q96LT9 517 aaKnown RBP7.62□□□□□ -1.19
LRRC28-220ENST00000561253 AARSD1Q9BTE6 412 aaKnown RBP7.62□□□□□ -1.19
LRRC28-220ENST00000561253 ATP13A1Q9HD20 1204 aa7.62□□□□□ -1.19
LRRC28-220ENST00000561253 BSDC1Q9NW68 430 aaPredicted RBP7.62□□□□□ -1.19
LRRC28-220ENST00000561253 VAV3Q9UKW4 847 aa7.62□□□□□ -1.19
LRRC28-220ENST00000561253 LAS1LQ9Y4W2 734 aaKnown RBP7.62□□□□□ -1.19
LRRC28-220ENST00000561253 LAMB4A4D0S4 1761 aa7.61□□□□□ -1.19
LRRC28-220ENST00000561253 IL6STP40189 918 aaPredicted RBP7.61□□□□□ -1.19
LRRC28-220ENST00000561253 CTSKP43235 329 aa7.61□□□□□ -1.19
LRRC28-220ENST00000561253 PIP4K2AP48426 406 aaPredicted RBP7.61□□□□□ -1.19
LRRC28-220ENST00000561253 PCBP3P57721 371 aaKnown RBP7.61□□□□□ -1.19
LRRC28-220ENST00000561253 PRKCQQ04759 706 aa7.61□□□□□ -1.19
LRRC28-220ENST00000561253 EXOSC9Q06265 439 aaKnown RBP7.61□□□□□ -1.19
LRRC28-220ENST00000561253 CREG2Q8IUH2 290 aa7.61□□□□□ -1.19
LRRC28-220ENST00000561253 STK11IPQ8N1F8 1099 aa7.61□□□□□ -1.19
LRRC28-220ENST00000561253 BTN2A2Q8WVV5 523 aa7.61□□□□□ -1.19
LRRC28-220ENST00000561253 MYH16Q9H6N6 1097 aa7.61□□□□□ -1.19
LRRC28-220ENST00000561253 STK32BQ9NY57 414 aa7.61□□□□□ -1.19
LRRC28-220ENST00000561253 COL24A1Q17RW2 1714 aa7.61□□□□□ -1.19
LRRC28-220ENST00000561253 COL15A1P39059 1388 aa7.6□□□□□ -1.19
LRRC28-220ENST00000561253 USP42Q9H9J4 1324 aaKnown RBP7.6□□□□□ -1.19
LRRC28-220ENST00000561253 TRAV20A0A0B4J274 112 aa7.6□□□□□ -1.19
LRRC28-220ENST00000561253 TBX1O43435 398 aa7.6□□□□□ -1.19
LRRC28-220ENST00000561253 CD3EP07766 207 aa7.6□□□□□ -1.19
LRRC28-220ENST00000561253 SYPP08247 313 aa7.6□□□□□ -1.19
LRRC28-220ENST00000561253 FAM153BP0C7A2 387 aa7.6□□□□□ -1.19
LRRC28-220ENST00000561253 HMGB2P26583 209 aaKnown RBP7.6□□□□□ -1.19
LRRC28-220ENST00000561253 BMP8BP34820 402 aa7.6□□□□□ -1.19
LRRC28-220ENST00000561253 NOP2P46087 812 aaKnown RBP7.6□□□□□ -1.19
LRRC28-220ENST00000561253 LONRF2Q1L5Z9 754 aa7.6□□□□□ -1.19
LRRC28-220ENST00000561253 DPY19L1Q2PZI1 675 aa7.6□□□□□ -1.19
LRRC28-220ENST00000561253 GAB4Q2WGN9 574 aa7.6□□□□□ -1.19
LRRC28-220ENST00000561253 GTF2IRD2BQ6EKJ0 949 aa7.6□□□□□ -1.19
LRRC28-220ENST00000561253 SDE2Q6IQ49 451 aa7.6□□□□□ -1.19
LRRC28-220ENST00000561253 GTF2IRD2Q86UP8 949 aa7.6□□□□□ -1.19
LRRC28-220ENST00000561253 JMYQ8N9B5 988 aa7.6□□□□□ -1.19
LRRC28-220ENST00000561253 ZBTB38Q8NAP3 1195 aaPredicted RBP7.6□□□□□ -1.19
LRRC28-220ENST00000561253 IPO9Q96P70 1041 aaKnown RBP7.6□□□□□ -1.19
LRRC28-220ENST00000561253 CDC6Q99741 560 aa7.6□□□□□ -1.19
LRRC28-220ENST00000561253 TCFL5Q9UL49 500 aa7.6□□□□□ -1.19
LRRC28-220ENST00000561253 GPR55Q9Y2T6 319 aaPredicted RBP7.6□□□□□ -1.19
LRRC28-220ENST00000561253 C4AP0C0L4 1744 aa7.59□□□□□ -1.19
LRRC28-220ENST00000561253 ELL2O00472 640 aaPredicted RBP7.59□□□□□ -1.19
LRRC28-220ENST00000561253 ADCY3O60266 1144 aa7.59□□□□□ -1.19
LRRC28-220ENST00000561253 CAMTA2O94983 1202 aa7.59□□□□□ -1.19
LRRC28-220ENST00000561253 ANXA1P04083 346 aa7.59□□□□□ -1.19
LRRC28-220ENST00000561253 GYS1P13807 737 aa7.59□□□□□ -1.19
LRRC28-220ENST00000561253 ITGB7P26010 798 aa7.59□□□□□ -1.19
LRRC28-220ENST00000561253 IKZF1Q13422 519 aa7.59□□□□□ -1.19
LRRC28-220ENST00000561253 TWISTNBQ3B726 338 aaPredicted RBP7.59□□□□□ -1.19
LRRC28-220ENST00000561253 ZC3H12BQ5HYM0 836 aaKnown RBP7.59□□□□□ -1.19
LRRC28-220ENST00000561253 RNF111Q6ZNA4 994 aa7.59□□□□□ -1.19
LRRC28-220ENST00000561253 ZSWIM2Q8NEG5 633 aa7.59□□□□□ -1.19
LRRC28-220ENST00000561253 FOXP3Q9BZS1 431 aa7.59□□□□□ -1.19
LRRC28-220ENST00000561253 KANSL2Q9H9L4 492 aa7.59□□□□□ -1.19
LRRC28-220ENST00000561253 DDX21Q9NR30 783 aaKnown RBP eCLIP7.59□□□□□ -1.19
LRRC28-220ENST00000561253 ARHGEF4Q9NR80 690 aa7.59□□□□□ -1.19
LRRC28-220ENST00000561253 TFCP2L1Q9NZI6 479 aa7.59□□□□□ -1.19
LRRC28-220ENST00000561253 CHPF2Q9P2E5 772 aa7.59□□□□□ -1.19
LRRC28-220ENST00000561253 SRP68Q9UHB9 627 aaKnown RBP7.59□□□□□ -1.19
LRRC28-220ENST00000561253 SLC5A6Q9Y289 635 aa7.59□□□□□ -1.19
LRRC28-220ENST00000561253 PTCH2Q9Y6C5 1203 aa7.59□□□□□ -1.19
LRRC28-220ENST00000561253 ESYT3A0FGR9 886 aa7.58□□□□□ -1.2
LRRC28-220ENST00000561253 VAV1P15498 845 aa7.58□□□□□ -1.2
LRRC28-220ENST00000561253 EIF2S2P20042 333 aaKnown RBP7.58□□□□□ -1.2
LRRC28-220ENST00000561253 CANXP27824 592 aaKnown RBP7.58□□□□□ -1.2
LRRC28-220ENST00000561253 SSTR4P31391 388 aa7.58□□□□□ -1.2
LRRC28-220ENST00000561253 GRIA2P42262 883 aa7.58□□□□□ -1.2
LRRC28-220ENST00000561253 EGR3Q06889 387 aa7.58□□□□□ -1.2
LRRC28-220ENST00000561253 BNIP3Q12983 259 aa7.58□□□□□ -1.2
LRRC28-220ENST00000561253 TTLL7Q6ZT98 887 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms