RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 KCNJ18B7U540 433 aa15.35■□□□□ 0.05
RABGGTA-220ENST00000560998 H7C1D1 291 aa15.35■□□□□ 0.05
RABGGTA-220ENST00000560998 EDIL3O43854 480 aa15.35■□□□□ 0.05
RABGGTA-220ENST00000560998 SLURP2P0DP57 97 aa15.35■□□□□ 0.05
RABGGTA-220ENST00000560998 VAV2P52735 878 aa15.35■□□□□ 0.05
RABGGTA-220ENST00000560998 HDLBPQ00341 1268 aaKnown RBP15.35■□□□□ 0.05
RABGGTA-220ENST00000560998 KCNJ12Q14500 433 aa15.35■□□□□ 0.05
RABGGTA-220ENST00000560998 SLMAPQ14BN4 828 aa15.35■□□□□ 0.05
RABGGTA-220ENST00000560998 LACTB2Q53H82 288 aaPredicted RBP15.35■□□□□ 0.05
RABGGTA-220ENST00000560998 ZNF772Q68DY9 489 aaPredicted RBP15.35■□□□□ 0.05
RABGGTA-220ENST00000560998 KIAA0825Q8IV33 1275 aa15.35■□□□□ 0.05
RABGGTA-220ENST00000560998 TSEN2Q8NCE0 465 aaKnown RBP15.35■□□□□ 0.05
RABGGTA-220ENST00000560998 GIMAP8Q8ND71 665 aaPredicted RBP15.35■□□□□ 0.05
RABGGTA-220ENST00000560998 TRIM58Q8NG06 486 aa15.35■□□□□ 0.05
RABGGTA-220ENST00000560998 CHP1Q99653 195 aa15.35■□□□□ 0.05
RABGGTA-220ENST00000560998 CENPHQ9H3R5 247 aa15.35■□□□□ 0.05
RABGGTA-220ENST00000560998 RIC8AQ9NPQ8 531 aa15.35■□□□□ 0.05
RABGGTA-220ENST00000560998 LUC7L2Q9Y383 392 aaKnown RBP15.35■□□□□ 0.05
RABGGTA-220ENST00000560998 H0YIN7 160 aa15.34■□□□□ 0.05
RABGGTA-220ENST00000560998 ECE2O60344 883 aa15.34■□□□□ 0.05
RABGGTA-220ENST00000560998 TCP1P17987 556 aaKnown RBP15.34■□□□□ 0.05
RABGGTA-220ENST00000560998 CACNB3P54284 484 aa15.34■□□□□ 0.05
RABGGTA-220ENST00000560998 ATP2B2Q01814 1243 aa15.34■□□□□ 0.05
RABGGTA-220ENST00000560998 IFT88Q13099 833 aa15.34■□□□□ 0.05
RABGGTA-220ENST00000560998 CALCRLQ16602 461 aa15.34■□□□□ 0.05
RABGGTA-220ENST00000560998 CCDC96Q2M329 555 aa15.34■□□□□ 0.05
RABGGTA-220ENST00000560998 CFAP58Q5T655 872 aa15.34■□□□□ 0.05
RABGGTA-220ENST00000560998 CEP57Q86XR8 500 aa15.34■□□□□ 0.05
RABGGTA-220ENST00000560998 CREG2Q8IUH2 290 aa15.34■□□□□ 0.05
RABGGTA-220ENST00000560998 CCDC155Q8N6L0 562 aa15.34■□□□□ 0.05
RABGGTA-220ENST00000560998 ARMC2Q8NEN0 867 aa15.34■□□□□ 0.05
RABGGTA-220ENST00000560998 MTMR8Q96EF0 704 aa15.34■□□□□ 0.05
RABGGTA-220ENST00000560998 C7orf25Q9BPX7 421 aa15.34■□□□□ 0.05
RABGGTA-220ENST00000560998 JADE2Q9NQC1 790 aa15.34■□□□□ 0.05
RABGGTA-220ENST00000560998 TAB2Q9NYJ8 693 aa15.34■□□□□ 0.05
RABGGTA-220ENST00000560998 CAPN11Q9UMQ6 739 aa15.34■□□□□ 0.05
RABGGTA-220ENST00000560998 TNS1Q9HBL0 1735 aaKnown RBP15.34■□□□□ 0.05
RABGGTA-220ENST00000560998 RNF225M0QZC1 329 aaPredicted RBP15.33■□□□□ 0.05
RABGGTA-220ENST00000560998 SLC16A2P36021 539 aa15.33■□□□□ 0.05
RABGGTA-220ENST00000560998 FXR2P51116 673 aaKnown RBP eCLIP15.33■□□□□ 0.05
RABGGTA-220ENST00000560998 XRCC4Q13426 336 aa15.33■□□□□ 0.05
RABGGTA-220ENST00000560998 NAIF1Q69YI7 327 aaPredicted RBP15.33■□□□□ 0.05
RABGGTA-220ENST00000560998 IRF2BP1Q8IU81 584 aa15.33■□□□□ 0.05
RABGGTA-220ENST00000560998 IQCKQ8N0W5 287 aa15.33■□□□□ 0.05
RABGGTA-220ENST00000560998 IDI2Q9BXS1 227 aa15.33■□□□□ 0.05
RABGGTA-220ENST00000560998 TRIM9Q9C026 710 aa15.33■□□□□ 0.05
RABGGTA-220ENST00000560998 DHX36Q9H2U1 1008 aaKnown RBP15.33■□□□□ 0.05
RABGGTA-220ENST00000560998 FAM198AQ9UFP1 575 aa15.33■□□□□ 0.05
RABGGTA-220ENST00000560998 TRIM49BA6NDI0 452 aa15.33■□□□□ 0.04
RABGGTA-220ENST00000560998 USP17L10C9JJH3 530 aa15.33■□□□□ 0.04
RABGGTA-220ENST00000560998 SLC37A4O43826 429 aa15.33■□□□□ 0.04
RABGGTA-220ENST00000560998 TDP2O95551 362 aa15.33■□□□□ 0.04
RABGGTA-220ENST00000560998 GHRP10912 638 aa15.33■□□□□ 0.04
RABGGTA-220ENST00000560998 TXKP42681 527 aa15.33■□□□□ 0.04
RABGGTA-220ENST00000560998 CLK2P49760 499 aaKnown RBP15.33■□□□□ 0.04
RABGGTA-220ENST00000560998 ATP1A2P50993 1020 aa15.33■□□□□ 0.04
RABGGTA-220ENST00000560998 PMS1P54277 932 aaKnown RBP15.33■□□□□ 0.04
RABGGTA-220ENST00000560998 TCP10Q12799 353 aa15.33■□□□□ 0.04
RABGGTA-220ENST00000560998 KCTD1Q719H9 257 aa15.33■□□□□ 0.04
RABGGTA-220ENST00000560998 IFT20Q8IY31 132 aa15.33■□□□□ 0.04
RABGGTA-220ENST00000560998 SPATA4Q8NEY3 305 aa15.33■□□□□ 0.04
RABGGTA-220ENST00000560998 CYFIP2Q96F07 1278 aa15.33■□□□□ 0.04
RABGGTA-220ENST00000560998 ATP6V1G3Q96LB4 118 aa15.33■□□□□ 0.04
RABGGTA-220ENST00000560998 SH3GL3Q99963 347 aa15.33■□□□□ 0.04
RABGGTA-220ENST00000560998 LRRC1Q9BTT6 524 aa15.33■□□□□ 0.04
RABGGTA-220ENST00000560998 VPS16Q9H269 839 aa15.33■□□□□ 0.04
RABGGTA-220ENST00000560998 SPATS2LQ9NUQ6 558 aaKnown RBP15.33■□□□□ 0.04
RABGGTA-220ENST00000560998 ZNHIT6Q9NWK9 470 aaKnown RBP15.33■□□□□ 0.04
RABGGTA-220ENST00000560998 TPX2Q9ULW0 747 aaKnown RBP15.33■□□□□ 0.04
RABGGTA-220ENST00000560998 ANKRD33BA6NCL7 494 aa15.32■□□□□ 0.04
RABGGTA-220ENST00000560998 DDTLA6NHG4 134 aaPredicted RBP15.32■□□□□ 0.04
RABGGTA-220ENST00000560998 PSMA7O14818 248 aa15.32■□□□□ 0.04
RABGGTA-220ENST00000560998 ZBTB5O15062 677 aa15.32■□□□□ 0.04
RABGGTA-220ENST00000560998 NPM3O75607 178 aaKnown RBP15.32■□□□□ 0.04
RABGGTA-220ENST00000560998 DNAJC8O75937 253 aaPredicted RBP15.32■□□□□ 0.04
RABGGTA-220ENST00000560998 GBP2P32456 591 aaPredicted RBP15.32■□□□□ 0.04
RABGGTA-220ENST00000560998 PAK2Q13177 524 aa15.32■□□□□ 0.04
RABGGTA-220ENST00000560998 UBE2SQ16763 222 aa15.32■□□□□ 0.04
RABGGTA-220ENST00000560998 SH3BP5LQ7L8J4 393 aa15.32■□□□□ 0.04
RABGGTA-220ENST00000560998 RETREG2Q8NC44 543 aa15.32■□□□□ 0.04
RABGGTA-220ENST00000560998 RNF217Q8TC41 542 aa15.32■□□□□ 0.04
RABGGTA-220ENST00000560998 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.32■□□□□ 0.04
RABGGTA-220ENST00000560998 MKL1Q969V6 931 aa15.32■□□□□ 0.04
RABGGTA-220ENST00000560998 CALML4Q96GE6 196 aa15.32■□□□□ 0.04
RABGGTA-220ENST00000560998 PI4KBQ9UBF8 816 aa15.32■□□□□ 0.04
RABGGTA-220ENST00000560998 DMGDHQ9UI17 866 aaKnown RBP15.32■□□□□ 0.04
RABGGTA-220ENST00000560998 RGPD3A6NKT7 1758 aaPredicted RBP15.32■□□□□ 0.04
RABGGTA-220ENST00000560998 RGPD4Q7Z3J3 1758 aa15.32■□□□□ 0.04
RABGGTA-220ENST00000560998 MYH7BA7E2Y1 1941 aa15.32■□□□□ 0.04
RABGGTA-220ENST00000560998 TTC26A0AVF1 554 aa15.31■□□□□ 0.04
RABGGTA-220ENST00000560998 FAM196BA6NMK8 535 aa15.31■□□□□ 0.04
RABGGTA-220ENST00000560998 ZNF185O15231 689 aa15.31■□□□□ 0.04
RABGGTA-220ENST00000560998 MGRN1O60291 552 aa15.31■□□□□ 0.04
RABGGTA-220ENST00000560998 TACC1O75410 805 aa15.31■□□□□ 0.04
RABGGTA-220ENST00000560998 TNNI2P48788 182 aa15.31■□□□□ 0.04
RABGGTA-220ENST00000560998 RBM5P52756 815 aaKnown RBP eCLIP15.31■□□□□ 0.04
RABGGTA-220ENST00000560998 CDK17Q00537 523 aa15.31■□□□□ 0.04
RABGGTA-220ENST00000560998 GUCY1A3Q02108 690 aa15.31■□□□□ 0.04
RABGGTA-220ENST00000560998 UBXN1Q04323 297 aa15.31■□□□□ 0.04
RABGGTA-220ENST00000560998 TBC1D8BQ0IIM8 1120 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms