RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 SENP7Q9BQF6 1050 aa21.47■■□□□ 1.03
TPM1-226ENST00000560959 BCAS3Q9H6U6 928 aa21.47■■□□□ 1.03
TPM1-226ENST00000560959 RIOX1Q9H6W3 641 aa21.47■■□□□ 1.03
TPM1-226ENST00000560959 FRMPD4Q14CM0 1322 aa21.47■■□□□ 1.03
TPM1-226ENST00000560959 RALGAPA2Q2PPJ7 1873 aa21.47■■□□□ 1.03
TPM1-226ENST00000560959 C5orf42Q9H799 3197 aa21.46■■□□□ 1.03
TPM1-226ENST00000560959 ENPP3O14638 875 aa21.46■■□□□ 1.03
TPM1-226ENST00000560959 FIBPO43427 364 aa21.46■■□□□ 1.03
TPM1-226ENST00000560959 EYA4O95677 639 aa21.46■■□□□ 1.03
TPM1-226ENST00000560959 CHRNA1P02708 482 aa21.46■■□□□ 1.03
TPM1-226ENST00000560959 MMP1P03956 469 aa21.46■■□□□ 1.03
TPM1-226ENST00000560959 MRPS9P82933 396 aaKnown RBP21.46■■□□□ 1.03
TPM1-226ENST00000560959 SEC23AQ15436 765 aa21.46■■□□□ 1.03
TPM1-226ENST00000560959 NAALADL2Q58DX5 795 aa21.46■■□□□ 1.03
TPM1-226ENST00000560959 CYFIP1Q7L576 1253 aa21.46■■□□□ 1.03
TPM1-226ENST00000560959 FCHSD1Q86WN1 690 aa21.46■■□□□ 1.03
TPM1-226ENST00000560959 P2RX5Q93086 422 aa21.46■■□□□ 1.03
TPM1-226ENST00000560959 MUTYHQ9UIF7 546 aa21.46■■□□□ 1.03
TPM1-226ENST00000560959 CD207Q9UJ71 328 aa21.46■■□□□ 1.03
TPM1-226ENST00000560959 ZNF318Q5VUA4 2279 aa21.46■■□□□ 1.03
TPM1-226ENST00000560959 STXBP3O00186 592 aa21.45■■□□□ 1.02
TPM1-226ENST00000560959 HIP1O00291 1037 aa21.45■■□□□ 1.02
TPM1-226ENST00000560959 ARHGAP4P98171 946 aa21.45■■□□□ 1.02
TPM1-226ENST00000560959 LMBR1Q8WVP7 490 aa21.45■■□□□ 1.02
TPM1-226ENST00000560959 PPP2R3CQ969Q6 453 aa21.45■■□□□ 1.02
TPM1-226ENST00000560959 MYO7AQ13402 2215 aa21.44■■□□□ 1.02
TPM1-226ENST00000560959 PNMA6FA0A0J9YX94 578 aa21.44■■□□□ 1.02
TPM1-226ENST00000560959 SEMA3FQ13275 785 aa21.44■■□□□ 1.02
TPM1-226ENST00000560959 XRRA1Q6P2D8 792 aa21.44■■□□□ 1.02
TPM1-226ENST00000560959 CWC27Q6UX04 472 aaKnown RBP21.44■■□□□ 1.02
TPM1-226ENST00000560959 RSPH3Q86UC2 560 aa21.44■■□□□ 1.02
TPM1-226ENST00000560959 ZFP91Q96JP5 570 aaPredicted RBP21.44■■□□□ 1.02
TPM1-226ENST00000560959 MSLNLQ96KJ4 702 aa21.44■■□□□ 1.02
TPM1-226ENST00000560959 OSBPL3Q9H4L5 887 aa21.44■■□□□ 1.02
TPM1-226ENST00000560959 PLAGL2Q9UPG8 496 aa21.44■■□□□ 1.02
TPM1-226ENST00000560959 MYH6P13533 1939 aa21.44■■□□□ 1.02
TPM1-226ENST00000560959 NLRC5Q86WI3 1866 aa21.43■■□□□ 1.02
TPM1-226ENST00000560959 TBX10O75333 385 aa21.43■■□□□ 1.02
TPM1-226ENST00000560959 DGKIO75912 1065 aa21.43■■□□□ 1.02
TPM1-226ENST00000560959 RPLP2P05387 115 aaKnown RBP21.43■■□□□ 1.02
TPM1-226ENST00000560959 GHRP10912 638 aa21.43■■□□□ 1.02
TPM1-226ENST00000560959 MGAT3Q09327 533 aa21.43■■□□□ 1.02
TPM1-226ENST00000560959 CAMK1Q14012 370 aa21.43■■□□□ 1.02
TPM1-226ENST00000560959 BTG3Q14201 252 aaPredicted RBP21.43■■□□□ 1.02
TPM1-226ENST00000560959 CLUL1Q15846 466 aa21.43■■□□□ 1.02
TPM1-226ENST00000560959 GIMAP8Q8ND71 665 aaPredicted RBP21.43■■□□□ 1.02
TPM1-226ENST00000560959 PIGSQ96S52 555 aa21.43■■□□□ 1.02
TPM1-226ENST00000560959 PTPN5P54829 565 aa21.42■■□□□ 1.02
TPM1-226ENST00000560959 LPIN1Q14693 890 aa21.42■■□□□ 1.02
TPM1-226ENST00000560959 SLC35G1Q2M3R5 365 aa21.42■■□□□ 1.02
TPM1-226ENST00000560959 TRIM67Q6ZTA4 783 aa21.42■■□□□ 1.02
TPM1-226ENST00000560959 HOMER1Q86YM7 354 aa21.42■■□□□ 1.02
TPM1-226ENST00000560959 IGFLR1Q9H665 355 aa21.42■■□□□ 1.02
TPM1-226ENST00000560959 DIAPH3Q9NSV4 1193 aa21.42■■□□□ 1.02
TPM1-226ENST00000560959 SQORQ9Y6N5 450 aa21.42■■□□□ 1.02
TPM1-226ENST00000560959 COASYQ13057 564 aa21.41■■□□□ 1.02
TPM1-226ENST00000560959 GRM4Q14833 912 aa21.41■■□□□ 1.02
TPM1-226ENST00000560959 FBXO47Q5MNV8 452 aa21.41■■□□□ 1.02
TPM1-226ENST00000560959 UTP14CQ5TAP6 766 aaKnown RBP21.41■■□□□ 1.02
TPM1-226ENST00000560959 FAM43BQ6ZT52 329 aaPredicted RBP21.41■■□□□ 1.02
TPM1-226ENST00000560959 TRIM50Q86XT4 487 aa21.41■■□□□ 1.02
TPM1-226ENST00000560959 CRIPAKQ8N1N5 446 aa21.41■■□□□ 1.02
TPM1-226ENST00000560959 SNX27Q96L92 541 aa21.41■■□□□ 1.02
TPM1-226ENST00000560959 LNPKQ9C0E8 428 aa21.41■■□□□ 1.02
TPM1-226ENST00000560959 RTEL1Q9NZ71 1219 aa21.41■■□□□ 1.02
TPM1-226ENST00000560959 MBLAC1A4D2B0 266 aaPredicted RBP21.4■■□□□ 1.02
TPM1-226ENST00000560959 LOC730098B7Z3J9 87 aa21.4■■□□□ 1.02
TPM1-226ENST00000560959 GTF2F1P35269 517 aaKnown RBP eCLIP21.4■■□□□ 1.02
TPM1-226ENST00000560959 CBX2Q14781 532 aaPredicted RBP21.4■■□□□ 1.02
TPM1-226ENST00000560959 PCNX4Q63HM2 1172 aa21.4■■□□□ 1.02
TPM1-226ENST00000560959 TSHZ1Q6ZSZ6 1077 aa21.4■■□□□ 1.02
TPM1-226ENST00000560959 CMTR2Q8IYT2 770 aaKnown RBP21.4■■□□□ 1.02
TPM1-226ENST00000560959 EFHBQ8N7U6 833 aa21.4■■□□□ 1.02
TPM1-226ENST00000560959 SMRP1Q8NCR6 262 aa21.4■■□□□ 1.02
TPM1-226ENST00000560959 SPPL3Q8TCT6 385 aa21.4■■□□□ 1.02
TPM1-226ENST00000560959 PBXIP1Q96AQ6 731 aa21.4■■□□□ 1.02
TPM1-226ENST00000560959 FTHL17Q9BXU8 183 aa21.4■■□□□ 1.02
TPM1-226ENST00000560959 ALG13Q9NP73 1137 aaKnown RBP21.4■■□□□ 1.02
TPM1-226ENST00000560959 LAMA4Q16363 1823 aa21.4■■□□□ 1.02
TPM1-226ENST00000560959 TECTAO75443 2155 aa21.39■■□□□ 1.01
TPM1-226ENST00000560959 TMEM221A6NGB7 291 aa21.39■■□□□ 1.01
TPM1-226ENST00000560959 M0R296 226 aa21.39■■□□□ 1.01
TPM1-226ENST00000560959 LINC01565O15544 149 aa21.39■■□□□ 1.01
TPM1-226ENST00000560959 CYTH3O43739 400 aa21.39■■□□□ 1.01
TPM1-226ENST00000560959 NDUFV1P49821 464 aa21.39■■□□□ 1.01
TPM1-226ENST00000560959 RUFY4Q6ZNE9 571 aa21.39■■□□□ 1.01
TPM1-226ENST00000560959 NLRX1Q86UT6 975 aa21.39■■□□□ 1.01
TPM1-226ENST00000560959 PLEKHM2Q8IWE5 1019 aa21.39■■□□□ 1.01
TPM1-226ENST00000560959 PRSS33Q8NF86 280 aa21.39■■□□□ 1.01
TPM1-226ENST00000560959 CLEC1BQ9P126 229 aa21.39■■□□□ 1.01
TPM1-226ENST00000560959 PIK3CDO00329 1044 aa21.38■■□□□ 1.01
TPM1-226ENST00000560959 ST18O60284 1047 aa21.38■■□□□ 1.01
TPM1-226ENST00000560959 ZXDAP98168 799 aa21.38■■□□□ 1.01
TPM1-226ENST00000560959 CYB5R4Q7L1T6 521 aa21.38■■□□□ 1.01
TPM1-226ENST00000560959 SEPT1Q8WYJ6 367 aa21.38■■□□□ 1.01
TPM1-226ENST00000560959 CDHR1Q96JP9 859 aa21.38■■□□□ 1.01
TPM1-226ENST00000560959 ERAP1Q9NZ08 941 aa21.38■■□□□ 1.01
TPM1-226ENST00000560959 TUBE1Q9UJT0 475 aa21.38■■□□□ 1.01
TPM1-226ENST00000560959 TTC3P53804 2025 aa21.38■■□□□ 1.01
TPM1-226ENST00000560959 USP34Q70CQ2 3546 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms