RNA–Protein interactions for RNA: ENST00000560236.1

LRRC28-218, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 703 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-218ENST00000560236 EPN3Q9H201 632 aa5.59□□□□□ -1.51
LRRC28-218ENST00000560236 SLC6A20Q9NP91 592 aa5.59□□□□□ -1.51
LRRC28-218ENST00000560236 ADAM29Q9UKF5 820 aa5.59□□□□□ -1.51
LRRC28-218ENST00000560236 KIF13AQ9H1H9 1805 aa5.59□□□□□ -1.51
LRRC28-218ENST00000560236 ERCC6L2Q5T890 1561 aa5.59□□□□□ -1.52
LRRC28-218ENST00000560236 SLC27A2O14975 620 aa5.58□□□□□ -1.52
LRRC28-218ENST00000560236 ZNF623O75123 536 aa5.58□□□□□ -1.52
LRRC28-218ENST00000560236 SLPIP03973 132 aa5.58□□□□□ -1.52
LRRC28-218ENST00000560236 COL6A1P12109 1028 aa5.58□□□□□ -1.52
LRRC28-218ENST00000560236 GRIN1Q05586 938 aa5.58□□□□□ -1.52
LRRC28-218ENST00000560236 MAP4K2Q12851 820 aa5.58□□□□□ -1.52
LRRC28-218ENST00000560236 PHF19Q5T6S3 580 aa5.58□□□□□ -1.52
LRRC28-218ENST00000560236 RALYLQ86SE5 291 aaKnown RBP5.58□□□□□ -1.52
LRRC28-218ENST00000560236 DTX3Q8N9I9 347 aa5.58□□□□□ -1.52
LRRC28-218ENST00000560236 WWC2-AS2Q96NR7 200 aa5.58□□□□□ -1.52
LRRC28-218ENST00000560236 MEGF9Q9H1U4 602 aa5.58□□□□□ -1.52
LRRC28-218ENST00000560236 SEMA4AQ9H3S1 761 aa5.58□□□□□ -1.52
LRRC28-218ENST00000560236 DLL4Q9NR61 685 aa5.58□□□□□ -1.52
LRRC28-218ENST00000560236 GPR27Q9NS67 375 aa5.58□□□□□ -1.52
LRRC28-218ENST00000560236 MUSKO15146 869 aa5.57□□□□□ -1.52
LRRC28-218ENST00000560236 KLHL18O94889 574 aa5.57□□□□□ -1.52
LRRC28-218ENST00000560236 FBXO21O94952 628 aa5.57□□□□□ -1.52
LRRC28-218ENST00000560236 CAPNS1P04632 268 aa5.57□□□□□ -1.52
LRRC28-218ENST00000560236 ETFBP38117 255 aa5.57□□□□□ -1.52
LRRC28-218ENST00000560236 PPP2R2AP63151 447 aa5.57□□□□□ -1.52
LRRC28-218ENST00000560236 SMAD2Q15796 467 aaKnown RBP5.57□□□□□ -1.52
LRRC28-218ENST00000560236 SLC10A6Q3KNW5 377 aa5.57□□□□□ -1.52
LRRC28-218ENST00000560236 PROSER1Q86XN7 944 aa5.57□□□□□ -1.52
LRRC28-218ENST00000560236 CLEC4DQ8WXI8 215 aa5.57□□□□□ -1.52
LRRC28-218ENST00000560236 IER2Q9BTL4 223 aa5.57□□□□□ -1.52
LRRC28-218ENST00000560236 ZNF608Q9ULD9 1512 aaPredicted RBP5.57□□□□□ -1.52
LRRC28-218ENST00000560236 CFTRP13569 1480 aa5.57□□□□□ -1.52
LRRC28-218ENST00000560236 MSCO60682 206 aa5.56□□□□□ -1.52
LRRC28-218ENST00000560236 GJB6O95452 261 aa5.56□□□□□ -1.52
LRRC28-218ENST00000560236 CHGBP05060 677 aa5.56□□□□□ -1.52
LRRC28-218ENST00000560236 CKMP06732 381 aa5.56□□□□□ -1.52
LRRC28-218ENST00000560236 R3HDM1Q15032 1099 aaKnown RBP5.56□□□□□ -1.52
LRRC28-218ENST00000560236 SPDYAQ5MJ70 313 aa5.56□□□□□ -1.52
LRRC28-218ENST00000560236 Q6ZUG5 572 aa5.56□□□□□ -1.52
LRRC28-218ENST00000560236 USP53Q70EK8 1073 aa5.56□□□□□ -1.52
LRRC28-218ENST00000560236 RBM12BQ8IXT5 1001 aaKnown RBP5.56□□□□□ -1.52
LRRC28-218ENST00000560236 Q8TCH9 128 aa5.56□□□□□ -1.52
LRRC28-218ENST00000560236 PHF20Q9BVI0 1012 aa5.56□□□□□ -1.52
LRRC28-218ENST00000560236 PPARGC1AQ9UBK2 798 aaKnown RBP5.56□□□□□ -1.52
LRRC28-218ENST00000560236 NUB1Q9Y5A7 615 aa5.56□□□□□ -1.52
LRRC28-218ENST00000560236 CLASP1Q7Z460 1538 aa5.55□□□□□ -1.52
LRRC28-218ENST00000560236 A0A1W2PQU0 124 aa5.55□□□□□ -1.52
LRRC28-218ENST00000560236 UNCXA6NJT0 531 aa5.55□□□□□ -1.52
LRRC28-218ENST00000560236 CNOT4O95628 575 aaKnown RBP5.55□□□□□ -1.52
LRRC28-218ENST00000560236 KNG1P01042 644 aa5.55□□□□□ -1.52
LRRC28-218ENST00000560236 GLRBP48167 497 aa5.55□□□□□ -1.52
LRRC28-218ENST00000560236 TUSC3Q13454 348 aa5.55□□□□□ -1.52
LRRC28-218ENST00000560236 SKIDA1Q1XH10 827 aa5.55□□□□□ -1.52
LRRC28-218ENST00000560236 HS1BP3Q53T59 392 aa5.55□□□□□ -1.52
LRRC28-218ENST00000560236 RSPO2Q6UXX9 243 aaPredicted RBP5.55□□□□□ -1.52
LRRC28-218ENST00000560236 OTOP3Q7RTS5 596 aa5.55□□□□□ -1.52
LRRC28-218ENST00000560236 IFNL2Q8IZJ0 200 aa5.55□□□□□ -1.52
LRRC28-218ENST00000560236 GNRHR2Q96P88 292 aa5.55□□□□□ -1.52
LRRC28-218ENST00000560236 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.55□□□□□ -1.52
LRRC28-218ENST00000560236 SEC61A2Q9H9S3 476 aa5.55□□□□□ -1.52
LRRC28-218ENST00000560236 ARHGAP20Q9P2F6 1191 aa5.55□□□□□ -1.52
LRRC28-218ENST00000560236 ZFP69BQ9UJL9 534 aa5.55□□□□□ -1.52
LRRC28-218ENST00000560236 TESMINQ9Y4I5 508 aa5.55□□□□□ -1.52
LRRC28-218ENST00000560236 SYNJ1O43426 1573 aa5.55□□□□□ -1.52
LRRC28-218ENST00000560236 ABCC8Q09428 1581 aa5.55□□□□□ -1.52
LRRC28-218ENST00000560236 DLX3O60479 287 aa5.54□□□□□ -1.52
LRRC28-218ENST00000560236 GNAT1P11488 350 aa5.54□□□□□ -1.52
LRRC28-218ENST00000560236 COL6A2P12110 1019 aa5.54□□□□□ -1.52
LRRC28-218ENST00000560236 FAHP16930 419 aa5.54□□□□□ -1.52
LRRC28-218ENST00000560236 GRK2P25098 689 aa5.54□□□□□ -1.52
LRRC28-218ENST00000560236 GRK3P35626 688 aa5.54□□□□□ -1.52
LRRC28-218ENST00000560236 SPIRE1Q08AE8 756 aa5.54□□□□□ -1.52
LRRC28-218ENST00000560236 GNL2Q13823 731 aaKnown RBP5.54□□□□□ -1.52
LRRC28-218ENST00000560236 PAN2Q504Q3 1202 aaKnown RBP5.54□□□□□ -1.52
LRRC28-218ENST00000560236 GPR155Q7Z3F1 870 aa5.54□□□□□ -1.52
LRRC28-218ENST00000560236 STPG3Q8N7X2 389 aa5.54□□□□□ -1.52
LRRC28-218ENST00000560236 LMF1Q96S06 567 aa5.54□□□□□ -1.52
LRRC28-218ENST00000560236 KCNJ15Q99712 375 aa5.54□□□□□ -1.52
LRRC28-218ENST00000560236 HS3ST3A1Q9Y663 406 aa5.54□□□□□ -1.52
LRRC28-218ENST00000560236 SLC4A7Q9Y6M7 1214 aa5.54□□□□□ -1.52
LRRC28-218ENST00000560236 LTFP02788 710 aa5.53□□□□□ -1.52
LRRC28-218ENST00000560236 ENO2P09104 434 aaPredicted RBP5.53□□□□□ -1.52
LRRC28-218ENST00000560236 ERCC5P28715 1186 aaPredicted RBP5.53□□□□□ -1.52
LRRC28-218ENST00000560236 PFKPQ01813 784 aa5.53□□□□□ -1.52
LRRC28-218ENST00000560236 KIZQ2M2Z5 673 aa5.53□□□□□ -1.52
LRRC28-218ENST00000560236 TCTN3Q6NUS6 607 aa5.53□□□□□ -1.52
LRRC28-218ENST00000560236 LBX2Q6XYB7 198 aa5.53□□□□□ -1.52
LRRC28-218ENST00000560236 UHMK1Q8TAS1 419 aaKnown RBP5.53□□□□□ -1.52
LRRC28-218ENST00000560236 FBXO41Q8TF61 875 aa5.53□□□□□ -1.52
LRRC28-218ENST00000560236 DCAF4Q8WV16 495 aa5.53□□□□□ -1.52
LRRC28-218ENST00000560236 AJUBAQ96IF1 538 aa5.53□□□□□ -1.52
LRRC28-218ENST00000560236 LRRC37BQ96QE4 947 aa5.53□□□□□ -1.52
LRRC28-218ENST00000560236 ZNF408Q9H9D4 720 aa5.53□□□□□ -1.52
LRRC28-218ENST00000560236 R3HCC1Q9Y3T6 440 aaKnown RBP5.53□□□□□ -1.52
LRRC28-218ENST00000560236 MROH2BQ7Z745 1585 aa5.53□□□□□ -1.52
LRRC28-218ENST00000560236 H0Y858 1186 aa5.52□□□□□ -1.53
LRRC28-218ENST00000560236 OVOL3O00110 214 aa5.52□□□□□ -1.53
LRRC28-218ENST00000560236 FOXS1O43638 330 aa5.52□□□□□ -1.53
LRRC28-218ENST00000560236 CSF2RBP32927 897 aa5.52□□□□□ -1.53
LRRC28-218ENST00000560236 HSP90AA2PQ14568 343 aaPredicted RBP5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms