RNA–Protein interactions for RNA: ENST00000559849.5

CHRNB4-204, Transcript of cholinergic receptor nicotinic beta 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNB4, Length 2,080 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB4-204ENST00000559849 SAFBQ15424 915 aaKnown RBP eCLIP15.5■□□□□ 0.07
CHRNB4-204ENST00000559849 Q4G0T1 1027 aa15.5■□□□□ 0.07
CHRNB4-204ENST00000559849 UTP14CQ5TAP6 766 aaKnown RBP15.5■□□□□ 0.07
CHRNB4-204ENST00000559849 PIK3AP1Q6ZUJ8 805 aa15.5■□□□□ 0.07
CHRNB4-204ENST00000559849 DIS3L2Q8IYB7 885 aaKnown RBP15.5■□□□□ 0.07
CHRNB4-204ENST00000559849 PPP1R13LQ8WUF5 828 aa15.5■□□□□ 0.07
CHRNB4-204ENST00000559849 HDAC6Q9UBN7 1215 aa15.5■□□□□ 0.07
CHRNB4-204ENST00000559849 GTF2IRD1Q9UHL9 959 aa15.5■□□□□ 0.07
CHRNB4-204ENST00000559849 KAT6AQ92794 2004 aa15.5■□□□□ 0.07
CHRNB4-204ENST00000559849 ITGB8P26012 769 aa15.5■□□□□ 0.07
CHRNB4-204ENST00000559849 FOSBP53539 338 aa15.5■□□□□ 0.07
CHRNB4-204ENST00000559849 ACTR2P61160 394 aa15.5■□□□□ 0.07
CHRNB4-204ENST00000559849 LETM2Q2VYF4 491 aa15.5■□□□□ 0.07
CHRNB4-204ENST00000559849 NEK8Q86SG6 692 aa15.5■□□□□ 0.07
CHRNB4-204ENST00000559849 FBXO18Q8NFZ0 1043 aa15.5■□□□□ 0.07
CHRNB4-204ENST00000559849 BADQ92934 168 aa15.5■□□□□ 0.07
CHRNB4-204ENST00000559849 PRO3102Q9H379 93 aa15.5■□□□□ 0.07
CHRNB4-204ENST00000559849 NOD1Q9Y239 953 aa15.5■□□□□ 0.07
CHRNB4-204ENST00000559849 KIF3AQ9Y496 699 aa15.5■□□□□ 0.07
CHRNB4-204ENST00000559849 PTGISQ16647 500 aa15.49■□□□□ 0.07
CHRNB4-204ENST00000559849 PPP4R3AQ6IN85 833 aa15.49■□□□□ 0.07
CHRNB4-204ENST00000559849 GLG1Q92896 1179 aa15.49■□□□□ 0.07
CHRNB4-204ENST00000559849 TNFRSF25Q93038 417 aa15.49■□□□□ 0.07
CHRNB4-204ENST00000559849 MBOAT7Q96N66 472 aa15.49■□□□□ 0.07
CHRNB4-204ENST00000559849 NAP1L4Q99733 375 aaKnown RBP15.49■□□□□ 0.07
CHRNB4-204ENST00000559849 HIPK3Q9H422 1215 aa15.49■□□□□ 0.07
CHRNB4-204ENST00000559849 SMARCAD1Q9H4L7 1026 aa15.49■□□□□ 0.07
CHRNB4-204ENST00000559849 PCDH10Q9P2E7 1040 aa15.49■□□□□ 0.07
CHRNB4-204ENST00000559849 RBM19Q9Y4C8 960 aaKnown RBP15.49■□□□□ 0.07
CHRNB4-204ENST00000559849 MSH4O15457 936 aa15.48■□□□□ 0.07
CHRNB4-204ENST00000559849 ATG7O95352 703 aa15.48■□□□□ 0.07
CHRNB4-204ENST00000559849 TDP2O95551 362 aa15.48■□□□□ 0.07
CHRNB4-204ENST00000559849 GDF6Q6KF10 455 aaPredicted RBP15.48■□□□□ 0.07
CHRNB4-204ENST00000559849 TRIM50Q86XT4 487 aa15.48■□□□□ 0.07
CHRNB4-204ENST00000559849 UIMC1Q96RL1 719 aa15.48■□□□□ 0.07
CHRNB4-204ENST00000559849 RIT2Q99578 217 aa15.48■□□□□ 0.07
CHRNB4-204ENST00000559849 AZI2Q9H6S1 392 aa15.48■□□□□ 0.07
CHRNB4-204ENST00000559849 ERAP1Q9NZ08 941 aa15.48■□□□□ 0.07
CHRNB4-204ENST00000559849 TCEAL9Q9UHQ7 104 aa15.48■□□□□ 0.07
CHRNB4-204ENST00000559849 LAMA3Q16787 3333 aa15.48■□□□□ 0.07
CHRNB4-204ENST00000559849 TRIP12Q14669 1992 aaPredicted RBP15.48■□□□□ 0.07
CHRNB4-204ENST00000559849 DDX39AO00148 427 aaKnown RBP15.48■□□□□ 0.07
CHRNB4-204ENST00000559849 LGR5O75473 907 aa15.48■□□□□ 0.07
CHRNB4-204ENST00000559849 GCFC2P16383 781 aaKnown RBP15.48■□□□□ 0.07
CHRNB4-204ENST00000559849 GUCY1B3Q02153 619 aa15.48■□□□□ 0.07
CHRNB4-204ENST00000559849 EARS2Q5JPH6 523 aaKnown RBP15.48■□□□□ 0.07
CHRNB4-204ENST00000559849 MFSD5Q6N075 450 aa15.48■□□□□ 0.07
CHRNB4-204ENST00000559849 PPP1R12CQ9BZL4 782 aa15.48■□□□□ 0.07
CHRNB4-204ENST00000559849 UBE2OQ9C0C9 1292 aaKnown RBP15.48■□□□□ 0.07
CHRNB4-204ENST00000559849 DDX25Q9UHL0 483 aaKnown RBP15.48■□□□□ 0.07
CHRNB4-204ENST00000559849 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.48■□□□□ 0.07
CHRNB4-204ENST00000559849 LTBP2Q14767 1821 aa15.48■□□□□ 0.07
CHRNB4-204ENST00000559849 EMSYQ7Z589 1322 aa15.47■□□□□ 0.07
CHRNB4-204ENST00000559849 CCNT1O60563 726 aaKnown RBP15.47■□□□□ 0.07
CHRNB4-204ENST00000559849 CCNE2O96020 404 aa15.47■□□□□ 0.07
CHRNB4-204ENST00000559849 CYP2C9P11712 490 aa15.47■□□□□ 0.07
CHRNB4-204ENST00000559849 KRT76Q01546 638 aa15.47■□□□□ 0.07
CHRNB4-204ENST00000559849 ZNF746Q6NUN9 644 aaPredicted RBP15.47■□□□□ 0.07
CHRNB4-204ENST00000559849 ABHD15Q6UXT9 468 aa15.47■□□□□ 0.07
CHRNB4-204ENST00000559849 SLC5A5Q92911 643 aa15.47■□□□□ 0.07
CHRNB4-204ENST00000559849 NOC4LQ9BVI4 516 aaKnown RBP15.47■□□□□ 0.07
CHRNB4-204ENST00000559849 RNPEPQ9H4A4 650 aa15.47■□□□□ 0.07
CHRNB4-204ENST00000559849 A0A1W2PPC1 479 aa15.47■□□□□ 0.07
CHRNB4-204ENST00000559849 GNAT1P11488 350 aa15.47■□□□□ 0.07
CHRNB4-204ENST00000559849 STAT5BP51692 787 aa15.47■□□□□ 0.07
CHRNB4-204ENST00000559849 PLPPR4Q7Z2D5 763 aa15.47■□□□□ 0.07
CHRNB4-204ENST00000559849 SMAP1Q8IYB5 467 aaPredicted RBP15.47■□□□□ 0.07
CHRNB4-204ENST00000559849 TMEM199Q8N511 208 aa15.47■□□□□ 0.07
CHRNB4-204ENST00000559849 TNPO1Q92973 898 aaKnown RBP15.47■□□□□ 0.07
CHRNB4-204ENST00000559849 FOXP1Q9H334 677 aaPredicted RBP15.47■□□□□ 0.07
CHRNB4-204ENST00000559849 IGKV6D-21A0A0A0MT36 114 aa15.46■□□□□ 0.07
CHRNB4-204ENST00000559849 C17orf102A2RUQ5 167 aa15.46■□□□□ 0.07
CHRNB4-204ENST00000559849 GAS7O60861 476 aa15.46■□□□□ 0.07
CHRNB4-204ENST00000559849 SMIM10L2AP0DMW4 78 aa15.46■□□□□ 0.07
CHRNB4-204ENST00000559849 SMIM10L2BP0DMW5 78 aa15.46■□□□□ 0.07
CHRNB4-204ENST00000559849 CYP2C18P33260 490 aa15.46■□□□□ 0.07
CHRNB4-204ENST00000559849 SLC26A2P50443 739 aa15.46■□□□□ 0.07
CHRNB4-204ENST00000559849 FPGSQ05932 587 aa15.46■□□□□ 0.07
CHRNB4-204ENST00000559849 LRCH2Q5VUJ6 765 aa15.46■□□□□ 0.07
CHRNB4-204ENST00000559849 MIS18BP1Q6P0N0 1132 aa15.46■□□□□ 0.07
CHRNB4-204ENST00000559849 PCYT2Q99447 389 aa15.46■□□□□ 0.07
CHRNB4-204ENST00000559849 PCDHA10Q9Y5I2 948 aa15.46■□□□□ 0.07
CHRNB4-204ENST00000559849 NRCAMQ92823 1304 aa15.46■□□□□ 0.06
CHRNB4-204ENST00000559849 FAM205CA6NFA0 338 aa15.45■□□□□ 0.06
CHRNB4-204ENST00000559849 GJB2P29033 226 aa15.45■□□□□ 0.06
CHRNB4-204ENST00000559849 HOXC8P31273 242 aa15.45■□□□□ 0.06
CHRNB4-204ENST00000559849 BFSP2Q13515 415 aa15.45■□□□□ 0.06
CHRNB4-204ENST00000559849 ETNPPLQ8TBG4 499 aa15.45■□□□□ 0.06
CHRNB4-204ENST00000559849 CTAGE1Q96RT6 745 aa15.45■□□□□ 0.06
CHRNB4-204ENST00000559849 TEKT3Q9BXF9 490 aa15.45■□□□□ 0.06
CHRNB4-204ENST00000559849 SMC3Q9UQE7 1217 aa15.45■□□□□ 0.06
CHRNB4-204ENST00000559849 MYH9P35579 1960 aaKnown RBP15.45■□□□□ 0.06
CHRNB4-204ENST00000559849 PITPNM1O00562 1244 aa15.45■□□□□ 0.06
CHRNB4-204ENST00000559849 BACH1O14867 736 aa15.45■□□□□ 0.06
CHRNB4-204ENST00000559849 SLC37A4O43826 429 aa15.45■□□□□ 0.06
CHRNB4-204ENST00000559849 PSMD10O75832 226 aa15.45■□□□□ 0.06
CHRNB4-204ENST00000559849 MARK3P27448 753 aa15.45■□□□□ 0.06
CHRNB4-204ENST00000559849 ZNF200P98182 395 aaPredicted RBP15.45■□□□□ 0.06
CHRNB4-204ENST00000559849 PTK7Q13308 1070 aa15.45■□□□□ 0.06
CHRNB4-204ENST00000559849 GNL2Q13823 731 aaKnown RBP15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms