RNA–Protein interactions for RNA: ENST00000559793.5

CTDSPL2-208, Transcript of CTD small phosphatase like 2, humanhuman

TSL 5

Gene CTDSPL2, Length 575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-208ENST00000559793 PSMC6P62333 389 aa9.55□□□□□ -0.88
CTDSPL2-208ENST00000559793 FSCN1Q16658 493 aaKnown RBP9.55□□□□□ -0.88
CTDSPL2-208ENST00000559793 TAPT1Q6NXT6 567 aa9.55□□□□□ -0.88
CTDSPL2-208ENST00000559793 IFNL3Q8IZI9 196 aa9.55□□□□□ -0.88
CTDSPL2-208ENST00000559793 KBTBD3Q8NAB2 608 aa9.55□□□□□ -0.88
CTDSPL2-208ENST00000559793 GMCL1P1Q8NEA9 526 aa9.55□□□□□ -0.88
CTDSPL2-208ENST00000559793 APPBP2Q92624 585 aa9.55□□□□□ -0.88
CTDSPL2-208ENST00000559793 CHMP4CQ96CF2 233 aa9.55□□□□□ -0.88
CTDSPL2-208ENST00000559793 UHRF1Q96T88 793 aaPredicted RBP9.55□□□□□ -0.88
CTDSPL2-208ENST00000559793 NOC4LQ9BVI4 516 aaKnown RBP9.55□□□□□ -0.88
CTDSPL2-208ENST00000559793 LRRCC1Q9C099 1032 aa9.55□□□□□ -0.88
CTDSPL2-208ENST00000559793 AP5M1Q9H0R1 490 aa9.55□□□□□ -0.88
CTDSPL2-208ENST00000559793 ACAD9Q9H845 621 aa9.55□□□□□ -0.88
CTDSPL2-208ENST00000559793 A1CFQ9NQ94 594 aaKnown RBP9.55□□□□□ -0.88
CTDSPL2-208ENST00000559793 ECHDC1Q9NTX5 307 aa9.55□□□□□ -0.88
CTDSPL2-208ENST00000559793 SYNPO2Q9UMS6 1093 aa9.55□□□□□ -0.88
CTDSPL2-208ENST00000559793 RBM19Q9Y4C8 960 aaKnown RBP9.55□□□□□ -0.88
CTDSPL2-208ENST00000559793 CHD7Q9P2D1 2997 aa9.55□□□□□ -0.88
CTDSPL2-208ENST00000559793 ASB14A6NK59 587 aa9.54□□□□□ -0.88
CTDSPL2-208ENST00000559793 GPAA1O43292 621 aa9.54□□□□□ -0.88
CTDSPL2-208ENST00000559793 B4GALT4O60513 344 aa9.54□□□□□ -0.88
CTDSPL2-208ENST00000559793 APPP05067 770 aa9.54□□□□□ -0.88
CTDSPL2-208ENST00000559793 MCCP23508 829 aa9.54□□□□□ -0.88
CTDSPL2-208ENST00000559793 SEC13P55735 322 aa9.54□□□□□ -0.88
CTDSPL2-208ENST00000559793 SNAP25P60880 206 aa9.54□□□□□ -0.88
CTDSPL2-208ENST00000559793 MUM1L1Q5H9M0 696 aa9.54□□□□□ -0.88
CTDSPL2-208ENST00000559793 IQSEC1Q6DN90 963 aa9.54□□□□□ -0.88
CTDSPL2-208ENST00000559793 EEPD1Q7L9B9 569 aa9.54□□□□□ -0.88
CTDSPL2-208ENST00000559793 TLK2Q86UE8 772 aa9.54□□□□□ -0.88
CTDSPL2-208ENST00000559793 SLC9A9Q8IVB4 645 aa9.54□□□□□ -0.88
CTDSPL2-208ENST00000559793 NEDD1Q8NHV4 660 aa9.54□□□□□ -0.88
CTDSPL2-208ENST00000559793 C1orf216Q8TAB5 229 aa9.54□□□□□ -0.88
CTDSPL2-208ENST00000559793 CHURC1Q8WUH1 139 aa9.54□□□□□ -0.88
CTDSPL2-208ENST00000559793 STAG1Q8WVM7 1258 aa9.54□□□□□ -0.88
CTDSPL2-208ENST00000559793 GTPBP3Q969Y2 492 aaKnown RBP9.54□□□□□ -0.88
CTDSPL2-208ENST00000559793 NECAB3Q96P71 396 aaPredicted RBP9.54□□□□□ -0.88
CTDSPL2-208ENST00000559793 TRERF1Q96PN7 1200 aa9.54□□□□□ -0.88
CTDSPL2-208ENST00000559793 WNT8AQ9H1J5 351 aa9.54□□□□□ -0.88
CTDSPL2-208ENST00000559793 MTIF3Q9H2K0 278 aaKnown RBP9.54□□□□□ -0.88
CTDSPL2-208ENST00000559793 RUBCNLQ9H714 662 aa9.54□□□□□ -0.88
CTDSPL2-208ENST00000559793 RNF146Q9NTX7 359 aa9.54□□□□□ -0.88
CTDSPL2-208ENST00000559793 REV3LO60673 3130 aa9.54□□□□□ -0.88
CTDSPL2-208ENST00000559793 SCN5AQ14524 2016 aa9.54□□□□□ -0.88
CTDSPL2-208ENST00000559793 M0R2C6 588 aa9.53□□□□□ -0.88
CTDSPL2-208ENST00000559793 RFXAPO00287 272 aa9.53□□□□□ -0.88
CTDSPL2-208ENST00000559793 ALAS1P13196 640 aa9.53□□□□□ -0.88
CTDSPL2-208ENST00000559793 GNAT2P19087 354 aa9.53□□□□□ -0.88
CTDSPL2-208ENST00000559793 TDO2P48775 406 aa9.53□□□□□ -0.88
CTDSPL2-208ENST00000559793 STAT2P52630 851 aa9.53□□□□□ -0.88
CTDSPL2-208ENST00000559793 TFAP4Q01664 338 aa9.53□□□□□ -0.88
CTDSPL2-208ENST00000559793 TFF2Q03403 129 aa9.53□□□□□ -0.88
CTDSPL2-208ENST00000559793 GAS6Q14393 721 aa9.53□□□□□ -0.88
CTDSPL2-208ENST00000559793 LBRQ14739 615 aaKnown RBP9.53□□□□□ -0.88
CTDSPL2-208ENST00000559793 TEAD4Q15561 434 aa9.53□□□□□ -0.88
CTDSPL2-208ENST00000559793 TKFCQ3LXA3 575 aa9.53□□□□□ -0.88
CTDSPL2-208ENST00000559793 TSHZ3Q63HK5 1081 aa9.53□□□□□ -0.88
CTDSPL2-208ENST00000559793 FOXR1Q6PIV2 292 aa9.53□□□□□ -0.88
CTDSPL2-208ENST00000559793 RPUSD2Q8IZ73 545 aaKnown RBP9.53□□□□□ -0.88
CTDSPL2-208ENST00000559793 PGBD3Q8N328 593 aa9.53□□□□□ -0.88
CTDSPL2-208ENST00000559793 TSEN2Q8NCE0 465 aaKnown RBP9.53□□□□□ -0.88
CTDSPL2-208ENST00000559793 ZDHHC1Q8WTX9 485 aa9.53□□□□□ -0.88
CTDSPL2-208ENST00000559793 SCLYQ96I15 445 aa9.53□□□□□ -0.88
CTDSPL2-208ENST00000559793 SEC62Q99442 399 aaKnown RBP9.53□□□□□ -0.88
CTDSPL2-208ENST00000559793 SEZ6LQ9BYH1 1024 aa9.53□□□□□ -0.88
CTDSPL2-208ENST00000559793 CRISPLD1Q9H336 500 aa9.53□□□□□ -0.88
CTDSPL2-208ENST00000559793 ZNF287Q9HBT7 754 aa9.53□□□□□ -0.88
CTDSPL2-208ENST00000559793 INCENPQ9NQS7 918 aa9.53□□□□□ -0.88
CTDSPL2-208ENST00000559793 CYP39A1Q9NYL5 469 aa9.53□□□□□ -0.88
CTDSPL2-208ENST00000559793 Q9Y3F1 56 aa9.53□□□□□ -0.88
CTDSPL2-208ENST00000559793 PCDHA11Q9Y5I1 949 aa9.53□□□□□ -0.88
CTDSPL2-208ENST00000559793 SLC4A7Q9Y6M7 1214 aa9.53□□□□□ -0.88
CTDSPL2-208ENST00000559793 LCTP09848 1927 aa9.52□□□□□ -0.88
CTDSPL2-208ENST00000559793 TRIP12Q14669 1992 aaPredicted RBP9.52□□□□□ -0.89
CTDSPL2-208ENST00000559793 TET1Q8NFU7 2136 aa9.52□□□□□ -0.89
CTDSPL2-208ENST00000559793 ZEB2O60315 1214 aa9.52□□□□□ -0.89
CTDSPL2-208ENST00000559793 PLA2G6O60733 806 aa9.52□□□□□ -0.89
CTDSPL2-208ENST00000559793 ZFYP08048 801 aaPredicted RBP9.52□□□□□ -0.89
CTDSPL2-208ENST00000559793 TSPY3P0CV98 308 aa9.52□□□□□ -0.89
CTDSPL2-208ENST00000559793 TSPY8P0CW00 308 aa9.52□□□□□ -0.89
CTDSPL2-208ENST00000559793 ATP4AP20648 1035 aa9.52□□□□□ -0.89
CTDSPL2-208ENST00000559793 RFX1P22670 979 aa9.52□□□□□ -0.89
CTDSPL2-208ENST00000559793 SLC1A4P43007 532 aa9.52□□□□□ -0.89
CTDSPL2-208ENST00000559793 DPYDQ12882 1025 aa9.52□□□□□ -0.89
CTDSPL2-208ENST00000559793 UBAP2LQ14157 1087 aaKnown RBP9.52□□□□□ -0.89
CTDSPL2-208ENST00000559793 TTLL4Q14679 1199 aa9.52□□□□□ -0.89
CTDSPL2-208ENST00000559793 TBCELQ5QJ74 424 aa9.52□□□□□ -0.89
CTDSPL2-208ENST00000559793 RCSD1Q6JBY9 416 aa9.52□□□□□ -0.89
CTDSPL2-208ENST00000559793 KIAA1211Q6ZU35 1233 aa9.52□□□□□ -0.89
CTDSPL2-208ENST00000559793 KCTD1Q719H9 257 aa9.52□□□□□ -0.89
CTDSPL2-208ENST00000559793 FAM160B2Q86V87 743 aa9.52□□□□□ -0.89
CTDSPL2-208ENST00000559793 ANKMY2Q8IV38 441 aa9.52□□□□□ -0.89
CTDSPL2-208ENST00000559793 FBXO16Q8IX29 292 aaPredicted RBP9.52□□□□□ -0.89
CTDSPL2-208ENST00000559793 ZSCAN1Q8NBB4 408 aa9.52□□□□□ -0.89
CTDSPL2-208ENST00000559793 MORC4Q8TE76 937 aa9.52□□□□□ -0.89
CTDSPL2-208ENST00000559793 ALDH8A1Q9H2A2 487 aaPredicted RBP9.52□□□□□ -0.89
CTDSPL2-208ENST00000559793 IL17RBQ9NRM6 502 aa9.52□□□□□ -0.89
CTDSPL2-208ENST00000559793 ZDHHC3Q9NYG2 299 aa9.52□□□□□ -0.89
CTDSPL2-208ENST00000559793 PRR12Q9ULL5 1215 aa9.52□□□□□ -0.89
CTDSPL2-208ENST00000559793 ISY1Q9ULR0 285 aaKnown RBP9.52□□□□□ -0.89
CTDSPL2-208ENST00000559793 PLIN4Q96Q06 1357 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms