RNA–Protein interactions for RNA: ENST00000559399.5

LRRC28-213, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-213ENST00000559399 ERVK-21P61565 698 aa17.12■□□□□ 0.33
LRRC28-213ENST00000559399 ADAM17P78536 824 aa17.12■□□□□ 0.33
LRRC28-213ENST00000559399 TFF2Q03403 129 aa17.12■□□□□ 0.33
LRRC28-213ENST00000559399 RTN1Q16799 776 aa17.12■□□□□ 0.33
LRRC28-213ENST00000559399 WWC2Q6AWC2 1192 aa17.12■□□□□ 0.33
LRRC28-213ENST00000559399 PPP1R18Q6NYC8 613 aa17.12■□□□□ 0.33
LRRC28-213ENST00000559399 DHX32Q7L7V1 743 aaKnown RBP17.12■□□□□ 0.33
LRRC28-213ENST00000559399 TEX2Q8IWB9 1127 aa17.12■□□□□ 0.33
LRRC28-213ENST00000559399 GDPD5Q8WTR4 605 aa17.12■□□□□ 0.33
LRRC28-213ENST00000559399 SEPT1Q8WYJ6 367 aa17.12■□□□□ 0.33
LRRC28-213ENST00000559399 JADE2Q9NQC1 790 aa17.12■□□□□ 0.33
LRRC28-213ENST00000559399 ERAP1Q9NZ08 941 aa17.12■□□□□ 0.33
LRRC28-213ENST00000559399 PKD2L1Q9P0L9 805 aa17.12■□□□□ 0.33
LRRC28-213ENST00000559399 INSL6Q9Y581 213 aa17.12■□□□□ 0.33
LRRC28-213ENST00000559399 CNTNAP5Q8WYK1 1306 aa17.12■□□□□ 0.33
LRRC28-213ENST00000559399 MAFGO15525 162 aa17.11■□□□□ 0.33
LRRC28-213ENST00000559399 ZBTB43O43298 467 aa17.11■□□□□ 0.33
LRRC28-213ENST00000559399 CDC45O75419 566 aa17.11■□□□□ 0.33
LRRC28-213ENST00000559399 NAPAP54920 295 aa17.11■□□□□ 0.33
LRRC28-213ENST00000559399 EXOSC10Q01780 885 aaKnown RBP17.11■□□□□ 0.33
LRRC28-213ENST00000559399 PPFIA1Q13136 1202 aa17.11■□□□□ 0.33
LRRC28-213ENST00000559399 KRT32Q14532 448 aa17.11■□□□□ 0.33
LRRC28-213ENST00000559399 TAF2Q6P1X5 1199 aa17.11■□□□□ 0.33
LRRC28-213ENST00000559399 APBB2Q92870 758 aa17.11■□□□□ 0.33
LRRC28-213ENST00000559399 GLG1Q92896 1179 aa17.11■□□□□ 0.33
LRRC28-213ENST00000559399 TCEANC2Q96MN5 208 aa17.11■□□□□ 0.33
LRRC28-213ENST00000559399 SUGCTQ9HAC7 445 aa17.11■□□□□ 0.33
LRRC28-213ENST00000559399 LMCD1Q9NZU5 365 aa17.11■□□□□ 0.33
LRRC28-213ENST00000559399 COG5Q9UP83 839 aa17.11■□□□□ 0.33
LRRC28-213ENST00000559399 MYH6P13533 1939 aa17.11■□□□□ 0.33
LRRC28-213ENST00000559399 TTC28Q96AY4 2481 aa17.11■□□□□ 0.33
LRRC28-213ENST00000559399 MUC3AQ02505 3323 aa17.1■□□□□ 0.33
LRRC28-213ENST00000559399 GBF1Q92538 1859 aa17.1■□□□□ 0.33
LRRC28-213ENST00000559399 GSTTP1A0A1W2PQM5 241 aa17.1■□□□□ 0.33
LRRC28-213ENST00000559399 MARK3P27448 753 aa17.1■□□□□ 0.33
LRRC28-213ENST00000559399 HTRA4P83105 476 aaPredicted RBP17.1■□□□□ 0.33
LRRC28-213ENST00000559399 TSGA10IPQ3SY00 556 aa17.1■□□□□ 0.33
LRRC28-213ENST00000559399 FAM26DQ5JW98 314 aa17.1■□□□□ 0.33
LRRC28-213ENST00000559399 RASEFQ8IZ41 740 aa17.1■□□□□ 0.33
LRRC28-213ENST00000559399 SMARCAD1Q9H4L7 1026 aa17.1■□□□□ 0.33
LRRC28-213ENST00000559399 JPH1Q9HDC5 661 aaPredicted RBP17.1■□□□□ 0.33
LRRC28-213ENST00000559399 BRPF3Q9ULD4 1205 aa17.1■□□□□ 0.33
LRRC28-213ENST00000559399 XIRP2A4UGR9 3374 aa17.09■□□□□ 0.33
LRRC28-213ENST00000559399 GOLGA8AA7E2F4 631 aa17.09■□□□□ 0.33
LRRC28-213ENST00000559399 GOLGA8BA8MQT2 603 aa17.09■□□□□ 0.33
LRRC28-213ENST00000559399 hCG_1984214I3L0E3 225 aa17.09■□□□□ 0.33
LRRC28-213ENST00000559399 BMP1P13497 986 aa17.09■□□□□ 0.33
LRRC28-213ENST00000559399 KCNQ1P51787 676 aa17.09■□□□□ 0.33
LRRC28-213ENST00000559399 ADCY7P51828 1080 aa17.09■□□□□ 0.33
LRRC28-213ENST00000559399 FUT2Q10981 343 aa17.09■□□□□ 0.33
LRRC28-213ENST00000559399 GRIK4Q16099 956 aa17.09■□□□□ 0.33
LRRC28-213ENST00000559399 ADCK5Q3MIX3 580 aa17.09■□□□□ 0.33
LRRC28-213ENST00000559399 TYW1BQ6NUM6 668 aa17.09■□□□□ 0.33
LRRC28-213ENST00000559399 RPAINQ86UA6 219 aa17.09■□□□□ 0.33
LRRC28-213ENST00000559399 RSPH3Q86UC2 560 aa17.09■□□□□ 0.33
LRRC28-213ENST00000559399 ZNF713Q8N859 430 aaPredicted RBP17.09■□□□□ 0.33
LRRC28-213ENST00000559399 SP7Q8TDD2 431 aaPredicted RBP17.09■□□□□ 0.33
LRRC28-213ENST00000559399 HLA-CQ95604 372 aa17.09■□□□□ 0.33
LRRC28-213ENST00000559399 YME1L1Q96TA2 773 aa17.09■□□□□ 0.33
LRRC28-213ENST00000559399 MXRA8Q9BRK3 442 aa17.09■□□□□ 0.33
LRRC28-213ENST00000559399 IFIH1Q9BYX4 1025 aaKnown RBP17.09■□□□□ 0.33
LRRC28-213ENST00000559399 OSBPL7Q9BZF2 842 aa17.09■□□□□ 0.33
LRRC28-213ENST00000559399 RIC8AQ9NPQ8 531 aa17.09■□□□□ 0.33
LRRC28-213ENST00000559399 TUBE1Q9UJT0 475 aa17.09■□□□□ 0.33
LRRC28-213ENST00000559399 KLF18A0A0U1RQI7 1052 aa17.08■□□□□ 0.32
LRRC28-213ENST00000559399 FOSP01100 380 aaPredicted RBP17.08■□□□□ 0.32
LRRC28-213ENST00000559399 HMGB1P09429 215 aaKnown RBP17.08■□□□□ 0.32
LRRC28-213ENST00000559399 RCAN1P53805 252 aa17.08■□□□□ 0.32
LRRC28-213ENST00000559399 RUFY4Q6ZNE9 571 aa17.08■□□□□ 0.32
LRRC28-213ENST00000559399 TOP1MTQ969P6 601 aa17.08■□□□□ 0.32
LRRC28-213ENST00000559399 SDF4Q9BRK5 362 aa17.08■□□□□ 0.32
LRRC28-213ENST00000559399 C17orf80Q9BSJ5 609 aa17.08■□□□□ 0.32
LRRC28-213ENST00000559399 ANO3Q9BYT9 981 aa17.08■□□□□ 0.32
LRRC28-213ENST00000559399 KCNH7Q9NS40 1196 aa17.08■□□□□ 0.32
LRRC28-213ENST00000559399 V9GY48 417 aaPredicted RBP17.08■□□□□ 0.32
LRRC28-213ENST00000559399 TET1Q8NFU7 2136 aa17.08■□□□□ 0.32
LRRC28-213ENST00000559399 MBLAC1A4D2B0 266 aaPredicted RBP17.07■□□□□ 0.32
LRRC28-213ENST00000559399 STXBP3O00186 592 aa17.07■□□□□ 0.32
LRRC28-213ENST00000559399 CHRNA1P02708 482 aa17.07■□□□□ 0.32
LRRC28-213ENST00000559399 GHRP10912 638 aa17.07■□□□□ 0.32
LRRC28-213ENST00000559399 FGD1P98174 961 aa17.07■□□□□ 0.32
LRRC28-213ENST00000559399 FBXO22Q8NEZ5 403 aa17.07■□□□□ 0.32
LRRC28-213ENST00000559399 PGBD1Q96JS3 809 aa17.07■□□□□ 0.32
LRRC28-213ENST00000559399 NECAB3Q96P71 396 aaPredicted RBP17.07■□□□□ 0.32
LRRC28-213ENST00000559399 GLT8D2Q9H1C3 349 aa17.07■□□□□ 0.32
LRRC28-213ENST00000559399 AZI2Q9H6S1 392 aa17.07■□□□□ 0.32
LRRC28-213ENST00000559399 BARHL2Q9NY43 387 aa17.07■□□□□ 0.32
LRRC28-213ENST00000559399 SLC9A2Q9UBY0 812 aa17.07■□□□□ 0.32
LRRC28-213ENST00000559399 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.06■□□□□ 0.32
LRRC28-213ENST00000559399 SMCO2A6NFE2 343 aa17.06■□□□□ 0.32
LRRC28-213ENST00000559399 UPP2O95045 317 aa17.06■□□□□ 0.32
LRRC28-213ENST00000559399 RPLP2P05387 115 aaKnown RBP17.06■□□□□ 0.32
LRRC28-213ENST00000559399 MGAT3Q09327 533 aa17.06■□□□□ 0.32
LRRC28-213ENST00000559399 AP3B2Q13367 1082 aa17.06■□□□□ 0.32
LRRC28-213ENST00000559399 CEP55Q53EZ4 464 aa17.06■□□□□ 0.32
LRRC28-213ENST00000559399 CYP2W1Q8TAV3 490 aa17.06■□□□□ 0.32
LRRC28-213ENST00000559399 TNPO1Q92973 898 aaKnown RBP17.06■□□□□ 0.32
LRRC28-213ENST00000559399 SAMD11Q96NU1 681 aa17.06■□□□□ 0.32
LRRC28-213ENST00000559399 PCYT2Q99447 389 aa17.06■□□□□ 0.32
LRRC28-213ENST00000559399 NAP1L2Q9ULW6 460 aaPredicted RBP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms