RNA–Protein interactions for RNA: ENST00000558919.1

VPS13C-207, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 5

Gene VPS13C, Length 566 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-207ENST00000558919 SRPK3Q9UPE1 567 aa5.53□□□□□ -1.52
VPS13C-207ENST00000558919 A0A1B0GTL3 188 aa5.52□□□□□ -1.53
VPS13C-207ENST00000558919 TCRBV16S1A1N1A0A5B0 115 aa5.52□□□□□ -1.53
VPS13C-207ENST00000558919 ZNF561-AS1K7EIQ3 104 aa5.52□□□□□ -1.53
VPS13C-207ENST00000558919 CYP7B1O75881 506 aa5.52□□□□□ -1.53
VPS13C-207ENST00000558919 AMY2AP04746 511 aa5.52□□□□□ -1.53
VPS13C-207ENST00000558919 PDE6AP16499 860 aa5.52□□□□□ -1.53
VPS13C-207ENST00000558919 AMY2BP19961 511 aa5.52□□□□□ -1.53
VPS13C-207ENST00000558919 FIGNQ5HY92 759 aa5.52□□□□□ -1.53
VPS13C-207ENST00000558919 STK32CQ86UX6 486 aa5.52□□□□□ -1.53
VPS13C-207ENST00000558919 OSTM1Q86WC4 334 aa5.52□□□□□ -1.53
VPS13C-207ENST00000558919 PROSER1Q86XN7 944 aa5.52□□□□□ -1.53
VPS13C-207ENST00000558919 ADGRG2Q8IZP9 1017 aa5.52□□□□□ -1.53
VPS13C-207ENST00000558919 SYNPOQ8N3V7 929 aa5.52□□□□□ -1.53
VPS13C-207ENST00000558919 RNPC3Q96LT9 517 aaKnown RBP5.52□□□□□ -1.53
VPS13C-207ENST00000558919 CLIC6Q96NY7 704 aa5.52□□□□□ -1.53
VPS13C-207ENST00000558919 KRTAP9-8Q9BYQ0 159 aa5.52□□□□□ -1.53
VPS13C-207ENST00000558919 CELF4Q9BZC1 486 aaKnown RBP5.52□□□□□ -1.53
VPS13C-207ENST00000558919 CD244Q9BZW8 370 aa5.52□□□□□ -1.53
VPS13C-207ENST00000558919 XYLT2Q9H1B5 865 aa5.52□□□□□ -1.53
VPS13C-207ENST00000558919 WASF3Q9UPY6 502 aa5.52□□□□□ -1.53
VPS13C-207ENST00000558919 MAN2B1O00754 1011 aa5.51□□□□□ -1.53
VPS13C-207ENST00000558919 RFPL3O75679 317 aa5.51□□□□□ -1.53
VPS13C-207ENST00000558919 RAPGEF3O95398 923 aa5.51□□□□□ -1.53
VPS13C-207ENST00000558919 ENO2P09104 434 aaPredicted RBP5.51□□□□□ -1.53
VPS13C-207ENST00000558919 KCNA6P17658 529 aa5.51□□□□□ -1.53
VPS13C-207ENST00000558919 GJA4P35212 333 aa5.51□□□□□ -1.53
VPS13C-207ENST00000558919 DNM2P50570 870 aa5.51□□□□□ -1.53
VPS13C-207ENST00000558919 JAM2P57087 298 aa5.51□□□□□ -1.53
VPS13C-207ENST00000558919 BTBD8Q5XKL5 378 aa5.51□□□□□ -1.53
VPS13C-207ENST00000558919 VASNQ6EMK4 673 aa5.51□□□□□ -1.53
VPS13C-207ENST00000558919 EP400NLQ6ZTU2 488 aa5.51□□□□□ -1.53
VPS13C-207ENST00000558919 FGD2Q7Z6J4 655 aa5.51□□□□□ -1.53
VPS13C-207ENST00000558919 CLUHP3Q96NS8 147 aa5.51□□□□□ -1.53
VPS13C-207ENST00000558919 SPATA25Q9BR10 227 aa5.51□□□□□ -1.53
VPS13C-207ENST00000558919 DLL4Q9NR61 685 aa5.51□□□□□ -1.53
VPS13C-207ENST00000558919 ATP23Q9Y6H3 246 aa5.51□□□□□ -1.53
VPS13C-207ENST00000558919 ESYT3A0FGR9 886 aa5.5□□□□□ -1.53
VPS13C-207ENST00000558919 B4E1Z4 1266 aa5.5□□□□□ -1.53
VPS13C-207ENST00000558919 ACOT7O00154 380 aa5.5□□□□□ -1.53
VPS13C-207ENST00000558919 CLASP2O75122 1294 aaKnown RBP5.5□□□□□ -1.53
VPS13C-207ENST00000558919 KRT15P19012 456 aa5.5□□□□□ -1.53
VPS13C-207ENST00000558919 HOXA5P20719 270 aa5.5□□□□□ -1.53
VPS13C-207ENST00000558919 FAM26FQ5R3K3 315 aa5.5□□□□□ -1.53
VPS13C-207ENST00000558919 CD276Q5ZPR3 534 aa5.5□□□□□ -1.53
VPS13C-207ENST00000558919 HHIPL2Q6UWX4 724 aa5.5□□□□□ -1.53
VPS13C-207ENST00000558919 TMC5Q6UXY8 1006 aa5.5□□□□□ -1.53
VPS13C-207ENST00000558919 PTRH1Q86Y79 214 aaKnown RBP5.5□□□□□ -1.53
VPS13C-207ENST00000558919 DTX3Q8N9I9 347 aa5.5□□□□□ -1.53
VPS13C-207ENST00000558919 FEZF2Q8TBJ5 459 aa5.5□□□□□ -1.53
VPS13C-207ENST00000558919 ADAMTS17Q8TE56 1095 aa5.5□□□□□ -1.53
VPS13C-207ENST00000558919 SMURF1Q9HCE7 757 aa5.5□□□□□ -1.53
VPS13C-207ENST00000558919 COQ6Q9Y2Z9 468 aa5.5□□□□□ -1.53
VPS13C-207ENST00000558919 OTOL1A6NHN0 477 aaPredicted RBP5.49□□□□□ -1.53
VPS13C-207ENST00000558919 FAM90A27PA6NNH2 459 aa5.49□□□□□ -1.53
VPS13C-207ENST00000558919 PPP1R12AO14974 1030 aaPredicted RBP5.49□□□□□ -1.53
VPS13C-207ENST00000558919 ASMTLO95671 621 aa5.49□□□□□ -1.53
VPS13C-207ENST00000558919 ASLP04424 464 aa5.49□□□□□ -1.53
VPS13C-207ENST00000558919 ZNF28P17035 718 aa5.49□□□□□ -1.53
VPS13C-207ENST00000558919 PTPN1P18031 435 aaKnown RBP5.49□□□□□ -1.53
VPS13C-207ENST00000558919 IGFALSP35858 605 aa5.49□□□□□ -1.53
VPS13C-207ENST00000558919 TCEA2Q15560 299 aa5.49□□□□□ -1.53
VPS13C-207ENST00000558919 OVCH1Q7RTY7 1134 aa5.49□□□□□ -1.53
VPS13C-207ENST00000558919 ZNF761Q86XN6 746 aaPredicted RBP5.49□□□□□ -1.53
VPS13C-207ENST00000558919 HOMER1Q86YM7 354 aa5.49□□□□□ -1.53
VPS13C-207ENST00000558919 SYT8Q8NBV8 401 aa5.49□□□□□ -1.53
VPS13C-207ENST00000558919 APPBP2Q92624 585 aa5.49□□□□□ -1.53
VPS13C-207ENST00000558919 ZSWIM3Q96MP5 696 aa5.49□□□□□ -1.53
VPS13C-207ENST00000558919 RIC8BQ9NVN3 520 aa5.49□□□□□ -1.53
VPS13C-207ENST00000558919 USP35Q9P2H5 1018 aa5.49□□□□□ -1.53
VPS13C-207ENST00000558919 RBPJLQ9UBG7 517 aa5.49□□□□□ -1.53
VPS13C-207ENST00000558919 ZNF839A8K0R7 811 aa5.48□□□□□ -1.53
VPS13C-207ENST00000558919 DDX3XO00571 662 aaKnown RBP eCLIP5.48□□□□□ -1.53
VPS13C-207ENST00000558919 NOBOXO60393 691 aa5.48□□□□□ -1.53
VPS13C-207ENST00000558919 CHGBP05060 677 aa5.48□□□□□ -1.53
VPS13C-207ENST00000558919 IL13P35225 146 aa5.48□□□□□ -1.53
VPS13C-207ENST00000558919 GJA9P57773 515 aa5.48□□□□□ -1.53
VPS13C-207ENST00000558919 PFKPQ01813 784 aa5.48□□□□□ -1.53
VPS13C-207ENST00000558919 DBPQ10586 325 aaPredicted RBP5.48□□□□□ -1.53
VPS13C-207ENST00000558919 RTP5Q14D33 572 aa5.48□□□□□ -1.53
VPS13C-207ENST00000558919 NT5DC1Q5TFE4 455 aa5.48□□□□□ -1.53
VPS13C-207ENST00000558919 PRAMEF18Q5VWM3 479 aa5.48□□□□□ -1.53
VPS13C-207ENST00000558919 ABHD17CQ6PCB6 329 aa5.48□□□□□ -1.53
VPS13C-207ENST00000558919 FRMD5Q7Z6J6 570 aa5.48□□□□□ -1.53
VPS13C-207ENST00000558919 DDX53Q86TM3 631 aaKnown RBP5.48□□□□□ -1.53
VPS13C-207ENST00000558919 NOP9Q86U38 636 aaKnown RBP5.48□□□□□ -1.53
VPS13C-207ENST00000558919 CISD2Q8N5K1 135 aaKnown RBP5.48□□□□□ -1.53
VPS13C-207ENST00000558919 IGSF22Q8N9C0 903 aa5.48□□□□□ -1.53
VPS13C-207ENST00000558919 C20orf173Q96LM9 149 aa5.48□□□□□ -1.53
VPS13C-207ENST00000558919 USP40Q9NVE5 1235 aa5.48□□□□□ -1.53
VPS13C-207ENST00000558919 RTEL1Q9NZ71 1219 aa5.48□□□□□ -1.53
VPS13C-207ENST00000558919 CROTQ9UKG9 612 aa5.48□□□□□ -1.53
VPS13C-207ENST00000558919 A0A0G2JLL6 359 aaPredicted RBP5.47□□□□□ -1.53
VPS13C-207ENST00000558919 C9orf118A6NHY6 69 aa5.47□□□□□ -1.53
VPS13C-207ENST00000558919 DNAJC8O75937 253 aaPredicted RBP5.47□□□□□ -1.53
VPS13C-207ENST00000558919 C4BPAP04003 597 aaKnown RBP5.47□□□□□ -1.53
VPS13C-207ENST00000558919 MLLT6P55198 1093 aaPredicted RBP5.47□□□□□ -1.53
VPS13C-207ENST00000558919 HERVK_113P62684 666 aa5.47□□□□□ -1.53
VPS13C-207ENST00000558919 KIAA2012Q0VF49 1180 aa5.47□□□□□ -1.53
VPS13C-207ENST00000558919 PABPC4Q13310 644 aaKnown RBP eCLIP5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms