RNA–Protein interactions for RNA: ENST00000558796.2

PBX1-213, Transcript of PBX homeobox 1, humanhuman

TSL 5

Gene PBX1, Length 366 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-213ENST00000558796 MCTP2Q6DN12 878 aa12.53□□□□□ -0.4
PBX1-213ENST00000558796 C16orf59Q7L2K0 433 aa12.53□□□□□ -0.4
PBX1-213ENST00000558796 BLIDQ8IZY5 108 aa12.53□□□□□ -0.4
PBX1-213ENST00000558796 IL23AQ9NPF7 189 aa12.53□□□□□ -0.4
PBX1-213ENST00000558796 GJB4Q9NTQ9 266 aa12.53□□□□□ -0.4
PBX1-213ENST00000558796 ZNF215Q9UL58 517 aaPredicted RBP12.53□□□□□ -0.4
PBX1-213ENST00000558796 CDH23Q9H251 3354 aa12.53□□□□□ -0.4
PBX1-213ENST00000558796 GSTTP1A0A1W2PQM5 241 aa12.52□□□□□ -0.41
PBX1-213ENST00000558796 C17orf102A2RUQ5 167 aa12.52□□□□□ -0.41
PBX1-213ENST00000558796 MAFGO15525 162 aa12.52□□□□□ -0.41
PBX1-213ENST00000558796 JAK2O60674 1132 aa12.52□□□□□ -0.41
PBX1-213ENST00000558796 SLC34A2O95436 690 aa12.52□□□□□ -0.41
PBX1-213ENST00000558796 CYP3A4P08684 503 aa12.52□□□□□ -0.41
PBX1-213ENST00000558796 MARK3P27448 753 aa12.52□□□□□ -0.41
PBX1-213ENST00000558796 SETQ01105 290 aaPredicted RBP12.52□□□□□ -0.41
PBX1-213ENST00000558796 BFSP2Q13515 415 aa12.52□□□□□ -0.41
PBX1-213ENST00000558796 PRR16Q569H4 304 aa12.52□□□□□ -0.41
PBX1-213ENST00000558796 TMEM240Q5SV17 173 aa12.52□□□□□ -0.41
PBX1-213ENST00000558796 NIPA1Q7RTP0 329 aa12.52□□□□□ -0.41
PBX1-213ENST00000558796 DEFB128Q7Z7B8 93 aa12.52□□□□□ -0.41
PBX1-213ENST00000558796 CCDC155Q8N6L0 562 aa12.52□□□□□ -0.41
PBX1-213ENST00000558796 DAGLBQ8NCG7 672 aa12.52□□□□□ -0.41
PBX1-213ENST00000558796 NSUN7Q8NE18 718 aaKnown RBP12.52□□□□□ -0.41
PBX1-213ENST00000558796 SEPT1Q8WYJ6 367 aa12.52□□□□□ -0.41
PBX1-213ENST00000558796 WNT8BQ93098 351 aa12.52□□□□□ -0.41
PBX1-213ENST00000558796 NFASCO94856 1347 aa12.52□□□□□ -0.41
PBX1-213ENST00000558796 ARID2Q68CP9 1835 aa12.51□□□□□ -0.41
PBX1-213ENST00000558796 CHD9Q3L8U1 2897 aa12.51□□□□□ -0.41
PBX1-213ENST00000558796 M0R2N6 131 aa12.51□□□□□ -0.41
PBX1-213ENST00000558796 PITPNM1O00562 1244 aa12.51□□□□□ -0.41
PBX1-213ENST00000558796 CCNE2O96020 404 aa12.51□□□□□ -0.41
PBX1-213ENST00000558796 FDPSP14324 419 aaKnown RBP12.51□□□□□ -0.41
PBX1-213ENST00000558796 RBM25P49756 843 aaKnown RBP12.51□□□□□ -0.41
PBX1-213ENST00000558796 ACTR2P61160 394 aa12.51□□□□□ -0.41
PBX1-213ENST00000558796 PSRC1Q6PGN9 363 aaPredicted RBP12.51□□□□□ -0.41
PBX1-213ENST00000558796 ZNF365Q70YC5 407 aa12.51□□□□□ -0.41
PBX1-213ENST00000558796 CCDC83Q8IWF9 413 aa12.51□□□□□ -0.41
PBX1-213ENST00000558796 RETREG2Q8NC44 543 aa12.51□□□□□ -0.41
PBX1-213ENST00000558796 CAGE1Q8TC20 777 aa12.51□□□□□ -0.41
PBX1-213ENST00000558796 TBCKQ8TEA7 893 aa12.51□□□□□ -0.41
PBX1-213ENST00000558796 GLG1Q92896 1179 aa12.51□□□□□ -0.41
PBX1-213ENST00000558796 ATP6V0A1Q93050 837 aa12.51□□□□□ -0.41
PBX1-213ENST00000558796 ZNF577Q9BSK1 485 aa12.51□□□□□ -0.41
PBX1-213ENST00000558796 PHF20Q9BVI0 1012 aa12.51□□□□□ -0.41
PBX1-213ENST00000558796 LIMCH1Q9UPQ0 1083 aa12.51□□□□□ -0.41
PBX1-213ENST00000558796 EMSYQ7Z589 1322 aa12.51□□□□□ -0.41
PBX1-213ENST00000558796 COL6A3P12111 3177 aa12.5□□□□□ -0.41
PBX1-213ENST00000558796 IPO5O00410 1097 aaKnown RBP12.5□□□□□ -0.41
PBX1-213ENST00000558796 TREHO43280 583 aa12.5□□□□□ -0.41
PBX1-213ENST00000558796 EDIL3O43854 480 aa12.5□□□□□ -0.41
PBX1-213ENST00000558796 IQCF3P0C7M6 154 aa12.5□□□□□ -0.41
PBX1-213ENST00000558796 CKBP12277 381 aa12.5□□□□□ -0.41
PBX1-213ENST00000558796 XBP1P17861 261 aa12.5□□□□□ -0.41
PBX1-213ENST00000558796 HOXC8P31273 242 aa12.5□□□□□ -0.41
PBX1-213ENST00000558796 CIITAP33076 1130 aa12.5□□□□□ -0.41
PBX1-213ENST00000558796 PTK7Q13308 1070 aa12.5□□□□□ -0.41
PBX1-213ENST00000558796 GALNT17Q6IS24 598 aa12.5□□□□□ -0.41
PBX1-213ENST00000558796 LRRC8DQ7L1W4 858 aa12.5□□□□□ -0.41
PBX1-213ENST00000558796 OTOP2Q7RTS6 562 aa12.5□□□□□ -0.41
PBX1-213ENST00000558796 FAM177A1Q8N128 213 aaPredicted RBP12.5□□□□□ -0.41
PBX1-213ENST00000558796 OXER1Q8TDS5 423 aa12.5□□□□□ -0.41
PBX1-213ENST00000558796 LMBR1Q8WVP7 490 aa12.5□□□□□ -0.41
PBX1-213ENST00000558796 WASF1Q92558 559 aa12.5□□□□□ -0.41
PBX1-213ENST00000558796 LENG9Q96B70 501 aa12.5□□□□□ -0.41
PBX1-213ENST00000558796 VWCEQ96DN2 955 aa12.5□□□□□ -0.41
PBX1-213ENST00000558796 PCYT2Q99447 389 aa12.5□□□□□ -0.41
PBX1-213ENST00000558796 RNPEPQ9H4A4 650 aa12.5□□□□□ -0.41
PBX1-213ENST00000558796 UPF2Q9HAU5 1272 aaKnown RBP12.5□□□□□ -0.41
PBX1-213ENST00000558796 SETD4Q9NVD3 440 aa12.5□□□□□ -0.41
PBX1-213ENST00000558796 CHD7Q9P2D1 2997 aa12.49□□□□□ -0.41
PBX1-213ENST00000558796 DHX15O43143 795 aaKnown RBP12.49□□□□□ -0.41
PBX1-213ENST00000558796 LGR5O75473 907 aa12.49□□□□□ -0.41
PBX1-213ENST00000558796 TDP2O95551 362 aa12.49□□□□□ -0.41
PBX1-213ENST00000558796 SELPP16109 830 aa12.49□□□□□ -0.41
PBX1-213ENST00000558796 PPFIA1Q13136 1202 aa12.49□□□□□ -0.41
PBX1-213ENST00000558796 NONOQ15233 471 aaKnown RBP eCLIP12.49□□□□□ -0.41
PBX1-213ENST00000558796 INF2Q27J81 1249 aa12.49□□□□□ -0.41
PBX1-213ENST00000558796 TRIM71Q2Q1W2 868 aaKnown RBP12.49□□□□□ -0.41
PBX1-213ENST00000558796 FAM109BQ6ICB4 259 aaPredicted RBP12.49□□□□□ -0.41
PBX1-213ENST00000558796 Q7L0L9 218 aa12.49□□□□□ -0.41
PBX1-213ENST00000558796 KRT25Q7Z3Z0 450 aa12.49□□□□□ -0.41
PBX1-213ENST00000558796 SERINC5Q86VE9 423 aa12.49□□□□□ -0.41
PBX1-213ENST00000558796 RPUSD2Q8IZ73 545 aaKnown RBP12.49□□□□□ -0.41
PBX1-213ENST00000558796 AFAP1L1Q8TED9 768 aa12.49□□□□□ -0.41
PBX1-213ENST00000558796 GJA10Q969M2 543 aa12.49□□□□□ -0.41
PBX1-213ENST00000558796 SMARCAD1Q9H4L7 1026 aa12.49□□□□□ -0.41
PBX1-213ENST00000558796 AZI2Q9H6S1 392 aa12.49□□□□□ -0.41
PBX1-213ENST00000558796 ERAP1Q9NZ08 941 aa12.49□□□□□ -0.41
PBX1-213ENST00000558796 CXXC1Q9P0U4 656 aaPredicted RBP12.49□□□□□ -0.41
PBX1-213ENST00000558796 CCDC194A0A1B0GVG4 234 aa12.48□□□□□ -0.41
PBX1-213ENST00000558796 FAM205CA6NFA0 338 aa12.48□□□□□ -0.41
PBX1-213ENST00000558796 ZBBXA8MT70 800 aa12.48□□□□□ -0.41
PBX1-213ENST00000558796 BACH1O14867 736 aa12.48□□□□□ -0.41
PBX1-213ENST00000558796 MSH4O15457 936 aa12.48□□□□□ -0.41
PBX1-213ENST00000558796 FGBP02675 491 aa12.48□□□□□ -0.41
PBX1-213ENST00000558796 CTSHP09668 335 aa12.48□□□□□ -0.41
PBX1-213ENST00000558796 RFC2P35250 354 aa12.48□□□□□ -0.41
PBX1-213ENST00000558796 THPOP40225 353 aa12.48□□□□□ -0.41
PBX1-213ENST00000558796 USP11P51784 963 aa12.48□□□□□ -0.41
PBX1-213ENST00000558796 RBL2Q08999 1139 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms