RNA–Protein interactions for RNA: ENST00000558376.5

RABGGTA-204, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-204ENST00000558376 GRXCR2A6NFK2 248 aa12.86□□□□□ -0.35
RABGGTA-204ENST00000558376 PRC1O43663 620 aa12.86□□□□□ -0.35
RABGGTA-204ENST00000558376 AMHP03971 560 aa12.86□□□□□ -0.35
RABGGTA-204ENST00000558376 HOXA13P31271 388 aaPredicted RBP12.86□□□□□ -0.35
RABGGTA-204ENST00000558376 SLC35G1Q2M3R5 365 aa12.86□□□□□ -0.35
RABGGTA-204ENST00000558376 EPC2Q52LR7 807 aa12.86□□□□□ -0.35
RABGGTA-204ENST00000558376 RALYLQ86SE5 291 aaKnown RBP12.86□□□□□ -0.35
RABGGTA-204ENST00000558376 MRPL38Q96DV4 380 aaKnown RBP12.86□□□□□ -0.35
RABGGTA-204ENST00000558376 MTMR8Q96EF0 704 aa12.86□□□□□ -0.35
RABGGTA-204ENST00000558376 AMNQ9BXJ7 453 aa12.86□□□□□ -0.35
RABGGTA-204ENST00000558376 SENP2Q9HC62 589 aa12.86□□□□□ -0.35
RABGGTA-204ENST00000558376 KAT6AQ92794 2004 aa12.86□□□□□ -0.35
RABGGTA-204ENST00000558376 ATG2AQ2TAZ0 1938 aa12.85□□□□□ -0.35
RABGGTA-204ENST00000558376 UBA1P22314 1058 aaKnown RBP12.85□□□□□ -0.35
RABGGTA-204ENST00000558376 HOXC8P31273 242 aa12.85□□□□□ -0.35
RABGGTA-204ENST00000558376 TRDNQ13061 729 aa12.85□□□□□ -0.35
RABGGTA-204ENST00000558376 PGM5Q15124 567 aa12.85□□□□□ -0.35
RABGGTA-204ENST00000558376 RAB11FIP4Q86YS3 637 aa12.85□□□□□ -0.35
RABGGTA-204ENST00000558376 NEK9Q8TD19 979 aa12.85□□□□□ -0.35
RABGGTA-204ENST00000558376 CHMP5Q9NZZ3 219 aa12.85□□□□□ -0.35
RABGGTA-204ENST00000558376 NAP1L2Q9ULW6 460 aaPredicted RBP12.85□□□□□ -0.35
RABGGTA-204ENST00000558376 EMSYQ7Z589 1322 aa12.85□□□□□ -0.35
RABGGTA-204ENST00000558376 C17orf102A2RUQ5 167 aa12.85□□□□□ -0.35
RABGGTA-204ENST00000558376 H3BQ06 376 aaPredicted RBP12.85□□□□□ -0.35
RABGGTA-204ENST00000558376 TREHO43280 583 aa12.85□□□□□ -0.35
RABGGTA-204ENST00000558376 PPFIA3O75145 1194 aa12.85□□□□□ -0.35
RABGGTA-204ENST00000558376 SSTR3P32745 418 aaPredicted RBP12.85□□□□□ -0.35
RABGGTA-204ENST00000558376 MCM5P33992 734 aa12.85□□□□□ -0.35
RABGGTA-204ENST00000558376 NBR1Q14596 966 aa12.85□□□□□ -0.35
RABGGTA-204ENST00000558376 KCNV1Q6PIU1 500 aa12.85□□□□□ -0.35
RABGGTA-204ENST00000558376 ATP6V0A1Q93050 837 aa12.85□□□□□ -0.35
RABGGTA-204ENST00000558376 BRPF3Q9ULD4 1205 aa12.85□□□□□ -0.35
RABGGTA-204ENST00000558376 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.84□□□□□ -0.35
RABGGTA-204ENST00000558376 PRR33A8MZF0 331 aa12.84□□□□□ -0.35
RABGGTA-204ENST00000558376 KLRF2D3W0D1 207 aa12.84□□□□□ -0.35
RABGGTA-204ENST00000558376 H3BNC9 293 aa12.84□□□□□ -0.35
RABGGTA-204ENST00000558376 UPP2O95045 317 aa12.84□□□□□ -0.35
RABGGTA-204ENST00000558376 SMIM10L2AP0DMW4 78 aa12.84□□□□□ -0.35
RABGGTA-204ENST00000558376 SMIM10L2BP0DMW5 78 aa12.84□□□□□ -0.35
RABGGTA-204ENST00000558376 NT5C2P49902 561 aa12.84□□□□□ -0.35
RABGGTA-204ENST00000558376 CCT2P78371 535 aaKnown RBP12.84□□□□□ -0.35
RABGGTA-204ENST00000558376 GPM6BQ13491 265 aa12.84□□□□□ -0.35
RABGGTA-204ENST00000558376 ANKRD1Q15327 319 aa12.84□□□□□ -0.35
RABGGTA-204ENST00000558376 SEC23AQ15436 765 aa12.84□□□□□ -0.35
RABGGTA-204ENST00000558376 TCEAL5Q5H9L2 206 aa12.84□□□□□ -0.35
RABGGTA-204ENST00000558376 FOXD4L5Q5VV16 416 aaPredicted RBP12.84□□□□□ -0.35
RABGGTA-204ENST00000558376 FOXD4L4Q8WXT5 416 aaPredicted RBP12.84□□□□□ -0.35
RABGGTA-204ENST00000558376 TOP1MTQ969P6 601 aa12.84□□□□□ -0.35
RABGGTA-204ENST00000558376 ZSCAN31Q96LW9 406 aaPredicted RBP12.84□□□□□ -0.35
RABGGTA-204ENST00000558376 RNPEPQ9H4A4 650 aa12.84□□□□□ -0.35
RABGGTA-204ENST00000558376 MAD2L2Q9UI95 211 aa12.84□□□□□ -0.35
RABGGTA-204ENST00000558376 PCDHA1Q9Y5I3 950 aa12.84□□□□□ -0.35
RABGGTA-204ENST00000558376 H3BRB1 525 aa12.83□□□□□ -0.36
RABGGTA-204ENST00000558376 TGFB3P10600 412 aa12.83□□□□□ -0.36
RABGGTA-204ENST00000558376 ALYREFQ86V81 257 aaKnown RBP12.83□□□□□ -0.36
RABGGTA-204ENST00000558376 TMEM192Q8IY95 271 aa12.83□□□□□ -0.36
RABGGTA-204ENST00000558376 BANK1Q8NDB2 785 aa12.83□□□□□ -0.36
RABGGTA-204ENST00000558376 SEPT8Q92599 483 aa12.83□□□□□ -0.36
RABGGTA-204ENST00000558376 SAMD11Q96NU1 681 aa12.83□□□□□ -0.36
RABGGTA-204ENST00000558376 TUT1Q9H6E5 874 aaKnown RBP12.83□□□□□ -0.36
RABGGTA-204ENST00000558376 MLXIPQ9HAP2 919 aa12.83□□□□□ -0.36
RABGGTA-204ENST00000558376 MAP3K20Q9NYL2 800 aaKnown RBP12.83□□□□□ -0.36
RABGGTA-204ENST00000558376 TELO2Q9Y4R8 837 aa12.83□□□□□ -0.36
RABGGTA-204ENST00000558376 RALGAPA2Q2PPJ7 1873 aa12.83□□□□□ -0.36
RABGGTA-204ENST00000558376 PALM3A6NDB9 673 aaPredicted RBP12.82□□□□□ -0.36
RABGGTA-204ENST00000558376 ZBTB5O15062 677 aa12.82□□□□□ -0.36
RABGGTA-204ENST00000558376 LGALS2P05162 132 aa12.82□□□□□ -0.36
RABGGTA-204ENST00000558376 CTSHP09668 335 aa12.82□□□□□ -0.36
RABGGTA-204ENST00000558376 CCND2P30279 289 aa12.82□□□□□ -0.36
RABGGTA-204ENST00000558376 COL19A1Q14993 1142 aa12.82□□□□□ -0.36
RABGGTA-204ENST00000558376 PTPROQ16827 1216 aa12.82□□□□□ -0.36
RABGGTA-204ENST00000558376 IFIT1BQ5T764 474 aaKnown RBP12.82□□□□□ -0.36
RABGGTA-204ENST00000558376 FCHSD1Q86WN1 690 aa12.82□□□□□ -0.36
RABGGTA-204ENST00000558376 INTS4Q96HW7 963 aaKnown RBP12.82□□□□□ -0.36
RABGGTA-204ENST00000558376 YME1L1Q96TA2 773 aa12.82□□□□□ -0.36
RABGGTA-204ENST00000558376 AGXT2Q9BYV1 514 aa12.82□□□□□ -0.36
RABGGTA-204ENST00000558376 NCOA5Q9HCD5 579 aaKnown RBP12.82□□□□□ -0.36
RABGGTA-204ENST00000558376 ZDHHC9Q9Y397 364 aa12.82□□□□□ -0.36
RABGGTA-204ENST00000558376 ZNF318Q5VUA4 2279 aa12.82□□□□□ -0.36
RABGGTA-204ENST00000558376 POTEB3A0JP26 581 aa12.82□□□□□ -0.36
RABGGTA-204ENST00000558376 PDIA3P30101 505 aaKnown RBP12.82□□□□□ -0.36
RABGGTA-204ENST00000558376 SCRN1Q12765 414 aa12.82□□□□□ -0.36
RABGGTA-204ENST00000558376 SEMA3FQ13275 785 aa12.82□□□□□ -0.36
RABGGTA-204ENST00000558376 PUS10Q3MIT2 529 aaKnown RBP12.82□□□□□ -0.36
RABGGTA-204ENST00000558376 TIGD5Q53EQ6 642 aa12.82□□□□□ -0.36
RABGGTA-204ENST00000558376 POTEBQ6S5H4 581 aa12.82□□□□□ -0.36
RABGGTA-204ENST00000558376 SAMD3Q8N6K7 520 aa12.82□□□□□ -0.36
RABGGTA-204ENST00000558376 IGDCC4Q8TDY8 1250 aa12.82□□□□□ -0.36
RABGGTA-204ENST00000558376 PABPC5Q96DU9 382 aaKnown RBP12.82□□□□□ -0.36
RABGGTA-204ENST00000558376 UIMC1Q96RL1 719 aa12.82□□□□□ -0.36
RABGGTA-204ENST00000558376 UBAC1Q9BSL1 405 aa12.82□□□□□ -0.36
RABGGTA-204ENST00000558376 KRT23Q9C075 422 aa12.82□□□□□ -0.36
RABGGTA-204ENST00000558376 SH2B1Q9NRF2 756 aaPredicted RBP12.82□□□□□ -0.36
RABGGTA-204ENST00000558376 SETD4Q9NVD3 440 aa12.82□□□□□ -0.36
RABGGTA-204ENST00000558376 GCOM1H8Y6P7 765 aaPredicted RBP12.81□□□□□ -0.36
RABGGTA-204ENST00000558376 POLR2MP0CAP2 368 aa12.81□□□□□ -0.36
RABGGTA-204ENST00000558376 ALADP13716 330 aa12.81□□□□□ -0.36
RABGGTA-204ENST00000558376 RXRAP19793 462 aa12.81□□□□□ -0.36
RABGGTA-204ENST00000558376 MRPS9P82933 396 aaKnown RBP12.81□□□□□ -0.36
RABGGTA-204ENST00000558376 EP400NLQ6ZTU2 488 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms