RNA–Protein interactions for RNA: ENST00000558211.2

HMGB1P8-201, Transcript of high mobility group box 1 pseudogene 8, humanhuman

BASIC

Gene HMGB1P8, Length 949 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P8-201ENST00000558211 NR5A1Q13285 461 aa13.73□□□□□ -0.21
HMGB1P8-201ENST00000558211 REXO1Q8N1G1 1221 aaKnown RBP13.73□□□□□ -0.21
HMGB1P8-201ENST00000558211 BICD2Q8TD16 824 aa13.73□□□□□ -0.21
HMGB1P8-201ENST00000558211 FGD4Q96M96 766 aa13.73□□□□□ -0.21
HMGB1P8-201ENST00000558211 ADD3Q9UEY8 706 aaKnown RBP13.73□□□□□ -0.21
HMGB1P8-201ENST00000558211 PCDHA6Q9UN73 950 aa13.73□□□□□ -0.21
HMGB1P8-201ENST00000558211 PCDHB9Q9Y5E1 797 aa13.73□□□□□ -0.21
HMGB1P8-201ENST00000558211 PCDHA8Q9Y5H6 950 aa13.73□□□□□ -0.21
HMGB1P8-201ENST00000558211 ZNF236Q9UL36 1845 aa13.73□□□□□ -0.21
HMGB1P8-201ENST00000558211 ASTN1O14525 1302 aa13.72□□□□□ -0.21
HMGB1P8-201ENST00000558211 ESPNB1AK53 854 aa13.72□□□□□ -0.21
HMGB1P8-201ENST00000558211 HOXC6P09630 235 aa13.72□□□□□ -0.21
HMGB1P8-201ENST00000558211 CYP2C19P33261 490 aa13.72□□□□□ -0.21
HMGB1P8-201ENST00000558211 KRT2P35908 639 aa13.72□□□□□ -0.21
HMGB1P8-201ENST00000558211 GHRHRQ02643 423 aa13.72□□□□□ -0.21
HMGB1P8-201ENST00000558211 GNL2Q13823 731 aaKnown RBP13.72□□□□□ -0.21
HMGB1P8-201ENST00000558211 SAFBQ15424 915 aaKnown RBP eCLIP13.72□□□□□ -0.21
HMGB1P8-201ENST00000558211 MCTP1Q6DN14 999 aa13.72□□□□□ -0.21
HMGB1P8-201ENST00000558211 EEPD1Q7L9B9 569 aa13.72□□□□□ -0.21
HMGB1P8-201ENST00000558211 NSUN6Q8TEA1 469 aaKnown RBP13.72□□□□□ -0.21
HMGB1P8-201ENST00000558211 TRIB2Q92519 343 aa13.72□□□□□ -0.21
HMGB1P8-201ENST00000558211 HPS1Q92902 700 aa13.72□□□□□ -0.21
HMGB1P8-201ENST00000558211 KCTD15Q96SI1 283 aaPredicted RBP13.72□□□□□ -0.21
HMGB1P8-201ENST00000558211 BRMS1Q9HCU9 246 aa13.72□□□□□ -0.21
HMGB1P8-201ENST00000558211 PXMP2Q9NR77 195 aa13.72□□□□□ -0.21
HMGB1P8-201ENST00000558211 DIS3Q9Y2L1 958 aaKnown RBP13.72□□□□□ -0.21
HMGB1P8-201ENST00000558211 WASF2Q9Y6W5 498 aa13.72□□□□□ -0.21
HMGB1P8-201ENST00000558211 VPS37CA5D8V6 355 aaPredicted RBP13.71□□□□□ -0.21
HMGB1P8-201ENST00000558211 ASB14A6NK59 587 aa13.71□□□□□ -0.21
HMGB1P8-201ENST00000558211 BTBD18B2RXH4 712 aa13.71□□□□□ -0.21
HMGB1P8-201ENST00000558211 FOSP01100 380 aaPredicted RBP13.71□□□□□ -0.21
HMGB1P8-201ENST00000558211 MYCP01106 439 aaPredicted RBP13.71□□□□□ -0.21
HMGB1P8-201ENST00000558211 MMP1P03956 469 aa13.71□□□□□ -0.21
HMGB1P8-201ENST00000558211 NR3C2P08235 984 aa13.71□□□□□ -0.21
HMGB1P8-201ENST00000558211 XRCC5P13010 732 aaKnown RBP13.71□□□□□ -0.21
HMGB1P8-201ENST00000558211 GRK4P32298 578 aa13.71□□□□□ -0.21
HMGB1P8-201ENST00000558211 NPY5RQ15761 445 aa13.71□□□□□ -0.21
HMGB1P8-201ENST00000558211 NBPF20Q3BBV1 942 aa13.71□□□□□ -0.21
HMGB1P8-201ENST00000558211 PRAMEF19Q5SWL8 479 aa13.71□□□□□ -0.21
HMGB1P8-201ENST00000558211 GALNT17Q6IS24 598 aa13.71□□□□□ -0.21
HMGB1P8-201ENST00000558211 ARMCX2Q7L311 632 aa13.71□□□□□ -0.21
HMGB1P8-201ENST00000558211 DIS3L2Q8IYB7 885 aaKnown RBP13.71□□□□□ -0.21
HMGB1P8-201ENST00000558211 DNERQ8NFT8 737 aa13.71□□□□□ -0.21
HMGB1P8-201ENST00000558211 FBXO18Q8NFZ0 1043 aa13.71□□□□□ -0.21
HMGB1P8-201ENST00000558211 SH3TC2Q8TF17 1288 aa13.71□□□□□ -0.21
HMGB1P8-201ENST00000558211 TINF2Q9BSI4 451 aa13.71□□□□□ -0.21
HMGB1P8-201ENST00000558211 ANO3Q9BYT9 981 aa13.71□□□□□ -0.21
HMGB1P8-201ENST00000558211 MAF1Q9H063 256 aa13.71□□□□□ -0.21
HMGB1P8-201ENST00000558211 EHMT1Q9H9B1 1298 aa13.71□□□□□ -0.21
HMGB1P8-201ENST00000558211 CCDC194A0A1B0GVG4 234 aa13.7□□□□□ -0.22
HMGB1P8-201ENST00000558211 B4DLN1 442 aa13.7□□□□□ -0.22
HMGB1P8-201ENST00000558211 FSHRP23945 695 aa13.7□□□□□ -0.22
HMGB1P8-201ENST00000558211 AP3B2Q13367 1082 aa13.7□□□□□ -0.22
HMGB1P8-201ENST00000558211 NNTQ13423 1086 aa13.7□□□□□ -0.22
HMGB1P8-201ENST00000558211 PGM5Q15124 567 aa13.7□□□□□ -0.22
HMGB1P8-201ENST00000558211 SLC9C1Q4G0N8 1177 aa13.7□□□□□ -0.22
HMGB1P8-201ENST00000558211 PKDCCQ504Y2 493 aa13.7□□□□□ -0.22
HMGB1P8-201ENST00000558211 MFSD14CQ5VZR4 134 aa13.7□□□□□ -0.22
HMGB1P8-201ENST00000558211 FBXO46Q6PJ61 603 aaPredicted RBP13.7□□□□□ -0.22
HMGB1P8-201ENST00000558211 FAM177A1Q8N128 213 aaPredicted RBP13.7□□□□□ -0.22
HMGB1P8-201ENST00000558211 DAGLBQ8NCG7 672 aa13.7□□□□□ -0.22
HMGB1P8-201ENST00000558211 IL31RAQ8NI17 732 aa13.7□□□□□ -0.22
HMGB1P8-201ENST00000558211 CCDC97Q96F63 343 aaPredicted RBP13.7□□□□□ -0.22
HMGB1P8-201ENST00000558211 MPHOSPH6Q99547 160 aaKnown RBP13.7□□□□□ -0.22
HMGB1P8-201ENST00000558211 PDCD2LQ9BRP1 358 aa13.7□□□□□ -0.22
HMGB1P8-201ENST00000558211 RTEL1Q9NZ71 1219 aa13.7□□□□□ -0.22
HMGB1P8-201ENST00000558211 MYH7BA7E2Y1 1941 aa13.69□□□□□ -0.22
HMGB1P8-201ENST00000558211 PDCP20941 246 aa13.69□□□□□ -0.22
HMGB1P8-201ENST00000558211 SYT1P21579 422 aa13.69□□□□□ -0.22
HMGB1P8-201ENST00000558211 CCND2P30279 289 aa13.69□□□□□ -0.22
HMGB1P8-201ENST00000558211 PKN2Q16513 984 aaKnown RBP13.69□□□□□ -0.22
HMGB1P8-201ENST00000558211 OLFML2BQ68BL8 750 aa13.69□□□□□ -0.22
HMGB1P8-201ENST00000558211 PIK3AP1Q6ZUJ8 805 aa13.69□□□□□ -0.22
HMGB1P8-201ENST00000558211 ZNF592Q92610 1267 aa13.69□□□□□ -0.22
HMGB1P8-201ENST00000558211 IWS1Q96ST2 819 aa13.69□□□□□ -0.22
HMGB1P8-201ENST00000558211 KLF16Q9BXK1 252 aaPredicted RBP13.69□□□□□ -0.22
HMGB1P8-201ENST00000558211 ZHX1Q9UKY1 873 aaPredicted RBP13.69□□□□□ -0.22
HMGB1P8-201ENST00000558211 POM121CA8CG34 1229 aa13.68□□□□□ -0.22
HMGB1P8-201ENST00000558211 M0R2N6 131 aa13.68□□□□□ -0.22
HMGB1P8-201ENST00000558211 SNAI1O95863 264 aaPredicted RBP13.68□□□□□ -0.22
HMGB1P8-201ENST00000558211 HMGCRP04035 888 aa13.68□□□□□ -0.22
HMGB1P8-201ENST00000558211 INHAP05111 366 aa13.68□□□□□ -0.22
HMGB1P8-201ENST00000558211 CNGA1P29973 690 aa13.68□□□□□ -0.22
HMGB1P8-201ENST00000558211 ZNF76P36508 570 aa13.68□□□□□ -0.22
HMGB1P8-201ENST00000558211 CACNB2Q08289 660 aaPredicted RBP13.68□□□□□ -0.22
HMGB1P8-201ENST00000558211 NONOQ15233 471 aaKnown RBP eCLIP13.68□□□□□ -0.22
HMGB1P8-201ENST00000558211 STXBP2Q15833 593 aa13.68□□□□□ -0.22
HMGB1P8-201ENST00000558211 INF2Q27J81 1249 aa13.68□□□□□ -0.22
HMGB1P8-201ENST00000558211 EARS2Q5JPH6 523 aaKnown RBP13.68□□□□□ -0.22
HMGB1P8-201ENST00000558211 INTS6LQ5JSJ4 861 aaKnown RBP13.68□□□□□ -0.22
HMGB1P8-201ENST00000558211 FOXD4L5Q5VV16 416 aaPredicted RBP13.68□□□□□ -0.22
HMGB1P8-201ENST00000558211 MCTP2Q6DN12 878 aa13.68□□□□□ -0.22
HMGB1P8-201ENST00000558211 MAMDC4Q6UXC1 1216 aa13.68□□□□□ -0.22
HMGB1P8-201ENST00000558211 KRT25Q7Z3Z0 450 aa13.68□□□□□ -0.22
HMGB1P8-201ENST00000558211 FBXO16Q8IX29 292 aaPredicted RBP13.68□□□□□ -0.22
HMGB1P8-201ENST00000558211 TBCKQ8TEA7 893 aa13.68□□□□□ -0.22
HMGB1P8-201ENST00000558211 FOXD4L4Q8WXT5 416 aaPredicted RBP13.68□□□□□ -0.22
HMGB1P8-201ENST00000558211 MCOLN1Q9GZU1 580 aa13.68□□□□□ -0.22
HMGB1P8-201ENST00000558211 CNPY2Q9Y2B0 182 aa13.68□□□□□ -0.22
HMGB1P8-201ENST00000558211 RPTORQ8N122 1335 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms