RNA–Protein interactions for RNA: ENST00000557866.1

SPG11-204, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 468 nt, Biotype non stop decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-204ENST00000557866 HAS1Q92839 578 aa8.33□□□□□ -1.08
SPG11-204ENST00000557866 KLRG1Q96E93 195 aa8.33□□□□□ -1.08
SPG11-204ENST00000557866 MBOAT7Q96N66 472 aa8.33□□□□□ -1.08
SPG11-204ENST00000557866 MMTAG2Q9BU76 263 aaKnown RBP8.33□□□□□ -1.08
SPG11-204ENST00000557866 ANO3Q9BYT9 981 aa8.33□□□□□ -1.08
SPG11-204ENST00000557866 CCSER1Q9C0I3 900 aa8.33□□□□□ -1.08
SPG11-204ENST00000557866 MYH8P13535 1937 aa8.33□□□□□ -1.08
SPG11-204ENST00000557866 MYH4Q9Y623 1939 aa8.33□□□□□ -1.08
SPG11-204ENST00000557866 PIK3CDO00329 1044 aa8.32□□□□□ -1.08
SPG11-204ENST00000557866 ADCY5O95622 1261 aa8.32□□□□□ -1.08
SPG11-204ENST00000557866 CAVIN2O95810 425 aa8.32□□□□□ -1.08
SPG11-204ENST00000557866 VCAM1P19320 739 aa8.32□□□□□ -1.08
SPG11-204ENST00000557866 LMOD1P29536 600 aaPredicted RBP8.32□□□□□ -1.08
SPG11-204ENST00000557866 HOXA13P31271 388 aaPredicted RBP8.32□□□□□ -1.08
SPG11-204ENST00000557866 TECP42680 631 aa8.32□□□□□ -1.08
SPG11-204ENST00000557866 AFMP43652 599 aa8.32□□□□□ -1.08
SPG11-204ENST00000557866 USP11P51784 963 aa8.32□□□□□ -1.08
SPG11-204ENST00000557866 ARHGAP4P98171 946 aa8.32□□□□□ -1.08
SPG11-204ENST00000557866 DPYDQ12882 1025 aa8.32□□□□□ -1.08
SPG11-204ENST00000557866 AP3B2Q13367 1082 aa8.32□□□□□ -1.08
SPG11-204ENST00000557866 NCAPHQ15003 741 aa8.32□□□□□ -1.08
SPG11-204ENST00000557866 CALCRLQ16602 461 aa8.32□□□□□ -1.08
SPG11-204ENST00000557866 KANK3Q6NY19 840 aa8.32□□□□□ -1.08
SPG11-204ENST00000557866 LDHDQ86WU2 507 aa8.32□□□□□ -1.08
SPG11-204ENST00000557866 IGSF22Q8N9C0 903 aa8.32□□□□□ -1.08
SPG11-204ENST00000557866 ZNF280CQ8ND82 737 aa8.32□□□□□ -1.08
SPG11-204ENST00000557866 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.32□□□□□ -1.08
SPG11-204ENST00000557866 STAMQ92783 540 aa8.32□□□□□ -1.08
SPG11-204ENST00000557866 GJA10Q969M2 543 aa8.32□□□□□ -1.08
SPG11-204ENST00000557866 HOOK2Q96ED9 719 aa8.32□□□□□ -1.08
SPG11-204ENST00000557866 BPIFA3Q9BQP9 254 aa8.32□□□□□ -1.08
SPG11-204ENST00000557866 RPAP3Q9H6T3 665 aaPredicted RBP8.32□□□□□ -1.08
SPG11-204ENST00000557866 PRM3Q9NNZ6 103 aa8.32□□□□□ -1.08
SPG11-204ENST00000557866 CYLDQ9NQC7 956 aa8.32□□□□□ -1.08
SPG11-204ENST00000557866 DDX25Q9UHL0 483 aaKnown RBP8.32□□□□□ -1.08
SPG11-204ENST00000557866 SLC35F4A4IF30 521 aa8.31□□□□□ -1.08
SPG11-204ENST00000557866 ICAM1P05362 532 aa8.31□□□□□ -1.08
SPG11-204ENST00000557866 CIITAP33076 1130 aa8.31□□□□□ -1.08
SPG11-204ENST00000557866 SREBF1P36956 1147 aa8.31□□□□□ -1.08
SPG11-204ENST00000557866 TXKP42681 527 aa8.31□□□□□ -1.08
SPG11-204ENST00000557866 BACE1P56817 501 aa8.31□□□□□ -1.08
SPG11-204ENST00000557866 PRKG1Q13976 671 aa8.31□□□□□ -1.08
SPG11-204ENST00000557866 MORC3Q14149 939 aa8.31□□□□□ -1.08
SPG11-204ENST00000557866 SUPT20HL1Q3ZLR7 823 aa8.31□□□□□ -1.08
SPG11-204ENST00000557866 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.31□□□□□ -1.08
SPG11-204ENST00000557866 CABP7Q86V35 215 aa8.31□□□□□ -1.08
SPG11-204ENST00000557866 CEP57L1Q8IYX8 460 aa8.31□□□□□ -1.08
SPG11-204ENST00000557866 CCDC155Q8N6L0 562 aa8.31□□□□□ -1.08
SPG11-204ENST00000557866 AOPEPQ8N6M6 819 aa8.31□□□□□ -1.08
SPG11-204ENST00000557866 IQUBQ8NA54 791 aa8.31□□□□□ -1.08
SPG11-204ENST00000557866 PRPF38AQ8NAV1 312 aaKnown RBP8.31□□□□□ -1.08
SPG11-204ENST00000557866 KDF1Q8NAX2 398 aaPredicted RBP8.31□□□□□ -1.08
SPG11-204ENST00000557866 CLEC4DQ8WXI8 215 aa8.31□□□□□ -1.08
SPG11-204ENST00000557866 ANP32BQ92688 251 aaKnown RBP8.31□□□□□ -1.08
SPG11-204ENST00000557866 LENG9Q96B70 501 aa8.31□□□□□ -1.08
SPG11-204ENST00000557866 WNK4Q96J92 1243 aa8.31□□□□□ -1.08
SPG11-204ENST00000557866 C12orf42Q96LP6 360 aa8.31□□□□□ -1.08
SPG11-204ENST00000557866 AK8Q96MA6 479 aa8.31□□□□□ -1.08
SPG11-204ENST00000557866 PNMA5Q96PV4 448 aa8.31□□□□□ -1.08
SPG11-204ENST00000557866 UIMC1Q96RL1 719 aa8.31□□□□□ -1.08
SPG11-204ENST00000557866 SLF1Q9BQI6 1058 aa8.31□□□□□ -1.08
SPG11-204ENST00000557866 SLC38A10Q9HBR0 1119 aa8.31□□□□□ -1.08
SPG11-204ENST00000557866 KCNMB3Q9NPA1 279 aa8.31□□□□□ -1.08
SPG11-204ENST00000557866 PICK1Q9NRD5 415 aa8.31□□□□□ -1.08
SPG11-204ENST00000557866 DISC1Q9NRI5 854 aa8.31□□□□□ -1.08
SPG11-204ENST00000557866 PPP1R9AQ9ULJ8 1098 aa8.31□□□□□ -1.08
SPG11-204ENST00000557866 MRPL11Q9Y3B7 192 aaKnown RBP8.31□□□□□ -1.08
SPG11-204ENST00000557866 ZHX2Q9Y6X8 837 aa8.31□□□□□ -1.08
SPG11-204ENST00000557866 ABCB11O95342 1321 aa8.3□□□□□ -1.08
SPG11-204ENST00000557866 FAM86B1E9PN63 330 aa8.3□□□□□ -1.08
SPG11-204ENST00000557866 FOSP01100 380 aaPredicted RBP8.3□□□□□ -1.08
SPG11-204ENST00000557866 CYP3A4P08684 503 aa8.3□□□□□ -1.08
SPG11-204ENST00000557866 FAM86B2P0C5J1 330 aa8.3□□□□□ -1.08
SPG11-204ENST00000557866 GCFC2P16383 781 aaKnown RBP8.3□□□□□ -1.08
SPG11-204ENST00000557866 PLCG1P19174 1290 aa8.3□□□□□ -1.08
SPG11-204ENST00000557866 LORP23490 312 aaPredicted RBP8.3□□□□□ -1.08
SPG11-204ENST00000557866 UBA7P41226 1012 aa8.3□□□□□ -1.08
SPG11-204ENST00000557866 USP14P54578 494 aa8.3□□□□□ -1.08
SPG11-204ENST00000557866 FMR1Q06787 632 aaKnown RBP eCLIP8.3□□□□□ -1.08
SPG11-204ENST00000557866 GRB10Q13322 594 aa8.3□□□□□ -1.08
SPG11-204ENST00000557866 CUL4BQ13620 913 aa8.3□□□□□ -1.08
SPG11-204ENST00000557866 VGLL4Q14135 290 aa8.3□□□□□ -1.08
SPG11-204ENST00000557866 GPR162Q16538 588 aa8.3□□□□□ -1.08
SPG11-204ENST00000557866 ECM1Q16610 540 aa8.3□□□□□ -1.08
SPG11-204ENST00000557866 RRAGBQ5VZM2 374 aa8.3□□□□□ -1.08
SPG11-204ENST00000557866 MCTP2Q6DN12 878 aa8.3□□□□□ -1.08
SPG11-204ENST00000557866 MOXD1Q6UVY6 613 aa8.3□□□□□ -1.08
SPG11-204ENST00000557866 REPS2Q8NFH8 660 aa8.3□□□□□ -1.08
SPG11-204ENST00000557866 CYP2W1Q8TAV3 490 aa8.3□□□□□ -1.08
SPG11-204ENST00000557866 ETNPPLQ8TBG4 499 aa8.3□□□□□ -1.08
SPG11-204ENST00000557866 RNF217Q8TC41 542 aa8.3□□□□□ -1.08
SPG11-204ENST00000557866 NANOS1Q8WY41 292 aaKnown RBP8.3□□□□□ -1.08
SPG11-204ENST00000557866 SMARCE1Q969G3 411 aa8.3□□□□□ -1.08
SPG11-204ENST00000557866 DCPSQ96C86 337 aaKnown RBP8.3□□□□□ -1.08
SPG11-204ENST00000557866 MED15Q96RN5 788 aa8.3□□□□□ -1.08
SPG11-204ENST00000557866 PLIN2Q99541 437 aa8.3□□□□□ -1.08
SPG11-204ENST00000557866 PYM1Q9BRP8 204 aaKnown RBP8.3□□□□□ -1.08
SPG11-204ENST00000557866 TANGO6Q9C0B7 1094 aa8.3□□□□□ -1.08
SPG11-204ENST00000557866 HSD3B7Q9H2F3 369 aa8.3□□□□□ -1.08
SPG11-204ENST00000557866 BLZF1Q9H2G9 400 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms