RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 TEKT3Q9BXF9 490 aa15.47■□□□□ 0.07
SHMT2-234ENST00000557703 TUT1Q9H6E5 874 aaKnown RBP15.47■□□□□ 0.07
SHMT2-234ENST00000557703 ERAP1Q9NZ08 941 aa15.47■□□□□ 0.07
SHMT2-234ENST00000557703 PCDHA10Q9Y5I2 948 aa15.47■□□□□ 0.07
SHMT2-234ENST00000557703 IGKV6D-21A0A0A0MT36 114 aa15.46■□□□□ 0.07
SHMT2-234ENST00000557703 STX6O43752 255 aa15.46■□□□□ 0.07
SHMT2-234ENST00000557703 MARCH6O60337 910 aa15.46■□□□□ 0.07
SHMT2-234ENST00000557703 EVI5O60447 810 aa15.46■□□□□ 0.07
SHMT2-234ENST00000557703 DKC1O60832 514 aaKnown RBP eCLIP15.46■□□□□ 0.07
SHMT2-234ENST00000557703 TDP2O95551 362 aa15.46■□□□□ 0.07
SHMT2-234ENST00000557703 LGALS2P05162 132 aa15.46■□□□□ 0.07
SHMT2-234ENST00000557703 RPLP2P05387 115 aaKnown RBP15.46■□□□□ 0.07
SHMT2-234ENST00000557703 GNAT1P11488 350 aa15.46■□□□□ 0.07
SHMT2-234ENST00000557703 TCF7P36402 384 aaPredicted RBP15.46■□□□□ 0.07
SHMT2-234ENST00000557703 ACTR2P61160 394 aa15.46■□□□□ 0.07
SHMT2-234ENST00000557703 PPP2R5CQ13362 524 aa15.46■□□□□ 0.07
SHMT2-234ENST00000557703 EARS2Q5JPH6 523 aaKnown RBP15.46■□□□□ 0.07
SHMT2-234ENST00000557703 FAM160B1Q5W0V3 765 aa15.46■□□□□ 0.07
SHMT2-234ENST00000557703 ABHD15Q6UXT9 468 aa15.46■□□□□ 0.07
SHMT2-234ENST00000557703 AFAP1L1Q8TED9 768 aa15.46■□□□□ 0.07
SHMT2-234ENST00000557703 C16orf70Q9BSU1 422 aa15.46■□□□□ 0.07
SHMT2-234ENST00000557703 STK24Q9Y6E0 443 aa15.46■□□□□ 0.07
SHMT2-234ENST00000557703 GSTTP1A0A1W2PQM5 241 aa15.45■□□□□ 0.06
SHMT2-234ENST00000557703 DTNBO60941 627 aa15.45■□□□□ 0.06
SHMT2-234ENST00000557703 PSAPP07602 524 aa15.45■□□□□ 0.06
SHMT2-234ENST00000557703 CALCRLQ16602 461 aa15.45■□□□□ 0.06
SHMT2-234ENST00000557703 TTC38Q5R3I4 469 aa15.45■□□□□ 0.06
SHMT2-234ENST00000557703 B3GNT9Q6UX72 402 aa15.45■□□□□ 0.06
SHMT2-234ENST00000557703 DPF3Q92784 378 aa15.45■□□□□ 0.06
SHMT2-234ENST00000557703 KAT2BQ92831 832 aa15.45■□□□□ 0.06
SHMT2-234ENST00000557703 FERMT2Q96AC1 680 aa15.45■□□□□ 0.06
SHMT2-234ENST00000557703 PCDHA12Q9UN75 941 aa15.45■□□□□ 0.06
SHMT2-234ENST00000557703 DNAH12Q6ZR08 3092 aa15.45■□□□□ 0.06
SHMT2-234ENST00000557703 CEP290O15078 2479 aa15.44■□□□□ 0.06
SHMT2-234ENST00000557703 PSEN2P49810 448 aa15.44■□□□□ 0.06
SHMT2-234ENST00000557703 STAT5BP51692 787 aa15.44■□□□□ 0.06
SHMT2-234ENST00000557703 FOSBP53539 338 aa15.44■□□□□ 0.06
SHMT2-234ENST00000557703 RTP1P59025 263 aa15.44■□□□□ 0.06
SHMT2-234ENST00000557703 MFSD10Q14728 455 aa15.44■□□□□ 0.06
SHMT2-234ENST00000557703 LRRC26Q2I0M4 334 aa15.44■□□□□ 0.06
SHMT2-234ENST00000557703 KIAA0753Q2KHM9 967 aa15.44■□□□□ 0.06
SHMT2-234ENST00000557703 NBPF20Q3BBV1 942 aa15.44■□□□□ 0.06
SHMT2-234ENST00000557703 C7orf31Q8N865 590 aa15.44■□□□□ 0.06
SHMT2-234ENST00000557703 GLG1Q92896 1179 aa15.44■□□□□ 0.06
SHMT2-234ENST00000557703 MTMR9Q96QG7 549 aa15.44■□□□□ 0.06
SHMT2-234ENST00000557703 RAB34Q9BZG1 259 aa15.44■□□□□ 0.06
SHMT2-234ENST00000557703 DISC1Q9NRI5 854 aa15.44■□□□□ 0.06
SHMT2-234ENST00000557703 CEP131Q9UPN4 1083 aa15.44■□□□□ 0.06
SHMT2-234ENST00000557703 NRCAMQ92823 1304 aa15.43■□□□□ 0.06
SHMT2-234ENST00000557703 RRN3P2A6NIE6 340 aa15.43■□□□□ 0.06
SHMT2-234ENST00000557703 KIF28PB7ZC32 967 aa15.43■□□□□ 0.06
SHMT2-234ENST00000557703 SLC37A4O43826 429 aa15.43■□□□□ 0.06
SHMT2-234ENST00000557703 PRPHP41219 470 aa15.43■□□□□ 0.06
SHMT2-234ENST00000557703 IRX5P78411 483 aaPredicted RBP15.43■□□□□ 0.06
SHMT2-234ENST00000557703 PDIA5Q14554 519 aa15.43■□□□□ 0.06
SHMT2-234ENST00000557703 ARL6IP4Q66PJ3 421 aaKnown RBP15.43■□□□□ 0.06
SHMT2-234ENST00000557703 ATL3Q6DD88 541 aa15.43■□□□□ 0.06
SHMT2-234ENST00000557703 NEK9Q8TD19 979 aa15.43■□□□□ 0.06
SHMT2-234ENST00000557703 HAS1Q92839 578 aa15.43■□□□□ 0.06
SHMT2-234ENST00000557703 ATP6V0A1Q93050 837 aa15.43■□□□□ 0.06
SHMT2-234ENST00000557703 FAM167AQ96KS9 214 aa15.43■□□□□ 0.06
SHMT2-234ENST00000557703 BCAS3Q9H6U6 928 aa15.43■□□□□ 0.06
SHMT2-234ENST00000557703 PKD2L1Q9P0L9 805 aa15.43■□□□□ 0.06
SHMT2-234ENST00000557703 PRKAG2Q9UGJ0 569 aa15.43■□□□□ 0.06
SHMT2-234ENST00000557703 GTF2IRD1Q9UHL9 959 aa15.43■□□□□ 0.06
SHMT2-234ENST00000557703 MAFBQ9Y5Q3 323 aaPredicted RBP15.43■□□□□ 0.06
SHMT2-234ENST00000557703 VPS37CA5D8V6 355 aaPredicted RBP15.42■□□□□ 0.06
SHMT2-234ENST00000557703 CCNE2O96020 404 aa15.42■□□□□ 0.06
SHMT2-234ENST00000557703 CD4P01730 458 aa15.42■□□□□ 0.06
SHMT2-234ENST00000557703 PTGS1P23219 599 aa15.42■□□□□ 0.06
SHMT2-234ENST00000557703 HOXC8P31273 242 aa15.42■□□□□ 0.06
SHMT2-234ENST00000557703 MCM7P33993 719 aa15.42■□□□□ 0.06
SHMT2-234ENST00000557703 ATN1P54259 1190 aaPredicted RBP15.42■□□□□ 0.06
SHMT2-234ENST00000557703 TLE2Q04725 743 aa15.42■□□□□ 0.06
SHMT2-234ENST00000557703 TMEM266Q2M3C6 531 aa15.42■□□□□ 0.06
SHMT2-234ENST00000557703 FAM43BQ6ZT52 329 aaPredicted RBP15.42■□□□□ 0.06
SHMT2-234ENST00000557703 MIER3Q7Z3K6 550 aa15.42■□□□□ 0.06
SHMT2-234ENST00000557703 POTEDQ86YR6 584 aa15.42■□□□□ 0.06
SHMT2-234ENST00000557703 FAM126BQ8IXS8 530 aa15.42■□□□□ 0.06
SHMT2-234ENST00000557703 KCTD17Q8N5Z5 321 aa15.42■□□□□ 0.06
SHMT2-234ENST00000557703 ZNF302Q9NR11 478 aa15.42■□□□□ 0.06
SHMT2-234ENST00000557703 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.42■□□□□ 0.06
SHMT2-234ENST00000557703 MTMR6Q9Y217 621 aa15.42■□□□□ 0.06
SHMT2-234ENST00000557703 SAMM50Q9Y512 469 aa15.42■□□□□ 0.06
SHMT2-234ENST00000557703 PPME1Q9Y570 386 aa15.42■□□□□ 0.06
SHMT2-234ENST00000557703 MORC2Q9Y6X9 1032 aaPredicted RBP15.42■□□□□ 0.06
SHMT2-234ENST00000557703 KAT6AQ92794 2004 aa15.42■□□□□ 0.06
SHMT2-234ENST00000557703 GRIN2DO15399 1336 aa15.42■□□□□ 0.06
SHMT2-234ENST00000557703 FAM205CA6NFA0 338 aa15.41■□□□□ 0.06
SHMT2-234ENST00000557703 BACH1O14867 736 aa15.41■□□□□ 0.06
SHMT2-234ENST00000557703 HBP1O60381 514 aa15.41■□□□□ 0.06
SHMT2-234ENST00000557703 PARNO95453 639 aaKnown RBP15.41■□□□□ 0.06
SHMT2-234ENST00000557703 P4HBP07237 508 aaKnown RBP15.41■□□□□ 0.06
SHMT2-234ENST00000557703 CLTBP09497 229 aa15.41■□□□□ 0.06
SHMT2-234ENST00000557703 OR52Z1P0C646 297 aa15.41■□□□□ 0.06
SHMT2-234ENST00000557703 MUTP22033 750 aa15.41■□□□□ 0.06
SHMT2-234ENST00000557703 TOB1P50616 345 aaPredicted RBP15.41■□□□□ 0.06
SHMT2-234ENST00000557703 SP4Q02446 784 aa15.41■□□□□ 0.06
SHMT2-234ENST00000557703 EPHA7Q15375 998 aa15.41■□□□□ 0.06
SHMT2-234ENST00000557703 TRIM60Q495X7 471 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms