RNA–Protein interactions for RNA: ENST00000557358.1

VPS33B-206, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-206ENST00000557358 RASGRP4Q8TDF6 673 aa15.68■□□□□ 0.1
VPS33B-206ENST00000557358 NAP1L4Q99733 375 aaKnown RBP15.68■□□□□ 0.1
VPS33B-206ENST00000557358 BACH2Q9BYV9 841 aa15.68■□□□□ 0.1
VPS33B-206ENST00000557358 FTOQ9C0B1 505 aaKnown RBP eCLIP15.68■□□□□ 0.1
VPS33B-206ENST00000557358 SH2B1Q9NRF2 756 aaPredicted RBP15.68■□□□□ 0.1
VPS33B-206ENST00000557358 NRCAMQ92823 1304 aa15.68■□□□□ 0.1
VPS33B-206ENST00000557358 TRIP12Q14669 1992 aaPredicted RBP15.67■□□□□ 0.1
VPS33B-206ENST00000557358 RANBP2P49792 3224 aaKnown RBP15.67■□□□□ 0.1
VPS33B-206ENST00000557358 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.67■□□□□ 0.1
VPS33B-206ENST00000557358 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.67■□□□□ 0.1
VPS33B-206ENST00000557358 BACH1O14867 736 aa15.67■□□□□ 0.1
VPS33B-206ENST00000557358 ARP10275 920 aa15.67■□□□□ 0.1
VPS33B-206ENST00000557358 SELPP16109 830 aa15.67■□□□□ 0.1
VPS33B-206ENST00000557358 RABEP1Q15276 862 aa15.67■□□□□ 0.1
VPS33B-206ENST00000557358 ME3Q16798 604 aa15.67■□□□□ 0.1
VPS33B-206ENST00000557358 MIS18BP1Q6P0N0 1132 aa15.67■□□□□ 0.1
VPS33B-206ENST00000557358 RSPH3Q86UC2 560 aa15.67■□□□□ 0.1
VPS33B-206ENST00000557358 NECAB1Q8N987 351 aa15.67■□□□□ 0.1
VPS33B-206ENST00000557358 CYP2W1Q8TAV3 490 aa15.67■□□□□ 0.1
VPS33B-206ENST00000557358 PPP1R13LQ8WUF5 828 aa15.67■□□□□ 0.1
VPS33B-206ENST00000557358 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.67■□□□□ 0.19e-6■■■■■ 27.7
VPS33B-206ENST00000557358 PCDH10Q9P2E7 1040 aa15.67■□□□□ 0.1
VPS33B-206ENST00000557358 ZBBXA8MT70 800 aa15.66■□□□□ 0.1
VPS33B-206ENST00000557358 FAM86B1E9PN63 330 aa15.66■□□□□ 0.1
VPS33B-206ENST00000557358 DDX39AO00148 427 aaKnown RBP15.66■□□□□ 0.1
VPS33B-206ENST00000557358 RPLP2P05387 115 aaKnown RBP15.66■□□□□ 0.1
VPS33B-206ENST00000557358 FAM86B2P0C5J1 330 aa15.66■□□□□ 0.1
VPS33B-206ENST00000557358 ACRP10323 421 aa15.66■□□□□ 0.1
VPS33B-206ENST00000557358 CIITAP33076 1130 aa15.66■□□□□ 0.1
VPS33B-206ENST00000557358 RBM25P49756 843 aaKnown RBP15.66■□□□□ 0.1
VPS33B-206ENST00000557358 SLC26A2P50443 739 aa15.66■□□□□ 0.1
VPS33B-206ENST00000557358 ACTR2P61160 394 aa15.66■□□□□ 0.1
VPS33B-206ENST00000557358 SMAD3P84022 425 aaKnown RBP15.66■□□□□ 0.1
VPS33B-206ENST00000557358 KRT76Q01546 638 aa15.66■□□□□ 0.1
VPS33B-206ENST00000557358 PPFIA1Q13136 1202 aa15.66■□□□□ 0.1
VPS33B-206ENST00000557358 SAFBQ15424 915 aaKnown RBP eCLIP15.66■□□□□ 0.1
VPS33B-206ENST00000557358 TMEM240Q5SV17 173 aa15.66■□□□□ 0.1
VPS33B-206ENST00000557358 ZNF365Q70YC5 407 aa15.66■□□□□ 0.1
VPS33B-206ENST00000557358 LRRC8DQ7L1W4 858 aa15.66■□□□□ 0.1
VPS33B-206ENST00000557358 DEFB128Q7Z7B8 93 aa15.66■□□□□ 0.1
VPS33B-206ENST00000557358 TBCKQ8TEA7 893 aa15.66■□□□□ 0.1
VPS33B-206ENST00000557358 SCLYQ96I15 445 aa15.66■□□□□ 0.1
VPS33B-206ENST00000557358 WNT8AQ9H1J5 351 aa15.66■□□□□ 0.1
VPS33B-206ENST00000557358 BCAS3Q9H6U6 928 aa15.66■□□□□ 0.1
VPS33B-206ENST00000557358 TRPC6Q9Y210 931 aa15.66■□□□□ 0.1
VPS33B-206ENST00000557358 SAMM50Q9Y512 469 aa15.66■□□□□ 0.1
VPS33B-206ENST00000557358 UMODL1Q5DID0 1318 aa15.66■□□□□ 0.1
VPS33B-206ENST00000557358 EMSYQ7Z589 1322 aa15.66■□□□□ 0.1
VPS33B-206ENST00000557358 GSTTP1A0A1W2PQM5 241 aa15.65■□□□□ 0.1
VPS33B-206ENST00000557358 RRN3P2A6NIE6 340 aa15.65■□□□□ 0.1
VPS33B-206ENST00000557358 MARCH6O60337 910 aa15.65■□□□□ 0.1
VPS33B-206ENST00000557358 CAND2O75155 1236 aa15.65■□□□□ 0.1
VPS33B-206ENST00000557358 SLC34A2O95436 690 aa15.65■□□□□ 0.1
VPS33B-206ENST00000557358 IQCF3P0C7M6 154 aa15.65■□□□□ 0.1
VPS33B-206ENST00000557358 MARK3P27448 753 aa15.65■□□□□ 0.1
VPS33B-206ENST00000557358 THPOP40225 353 aa15.65■□□□□ 0.1
VPS33B-206ENST00000557358 STAT5BP51692 787 aa15.65■□□□□ 0.1
VPS33B-206ENST00000557358 EPHB4P54760 987 aa15.65■□□□□ 0.1
VPS33B-206ENST00000557358 ZNF697Q5TEC3 545 aa15.65■□□□□ 0.1
VPS33B-206ENST00000557358 PLPPR4Q7Z2D5 763 aa15.65■□□□□ 0.1
VPS33B-206ENST00000557358 TRIM50Q86XT4 487 aa15.65■□□□□ 0.1
VPS33B-206ENST00000557358 SMAP1Q8IYB5 467 aaPredicted RBP15.65■□□□□ 0.1
VPS33B-206ENST00000557358 HERVK_113Q902F9 699 aa15.65■□□□□ 0.1
VPS33B-206ENST00000557358 LRCH3Q96II8 777 aa15.65■□□□□ 0.1
VPS33B-206ENST00000557358 LLPHQ9BRT6 129 aaKnown RBP15.65■□□□□ 0.1
VPS33B-206ENST00000557358 PHF20Q9BVI0 1012 aa15.65■□□□□ 0.1
VPS33B-206ENST00000557358 KCNJ14Q9UNX9 436 aa15.65■□□□□ 0.1
VPS33B-206ENST00000557358 KIF3AQ9Y496 699 aa15.65■□□□□ 0.1
VPS33B-206ENST00000557358 GAS7O60861 476 aa15.64■□□□□ 0.09
VPS33B-206ENST00000557358 PSAPP07602 524 aa15.64■□□□□ 0.09
VPS33B-206ENST00000557358 CKBP12277 381 aa15.64■□□□□ 0.09
VPS33B-206ENST00000557358 KRT2P35908 639 aa15.64■□□□□ 0.09
VPS33B-206ENST00000557358 HMGN5P82970 282 aaKnown RBP15.64■□□□□ 0.09
VPS33B-206ENST00000557358 ZNF746Q6NUN9 644 aaPredicted RBP15.64■□□□□ 0.09
VPS33B-206ENST00000557358 TAF2Q6P1X5 1199 aa15.64■□□□□ 0.09
VPS33B-206ENST00000557358 MOXD1Q6UVY6 613 aa15.64■□□□□ 0.09
VPS33B-206ENST00000557358 OTOP2Q7RTS6 562 aa15.64■□□□□ 0.09
VPS33B-206ENST00000557358 SERINC5Q86VE9 423 aa15.64■□□□□ 0.09
VPS33B-206ENST00000557358 CKAP2LQ8IYA6 745 aa15.64■□□□□ 0.09
VPS33B-206ENST00000557358 FAM184AQ8NB25 1140 aa15.64■□□□□ 0.09
VPS33B-206ENST00000557358 CRYGNQ8WXF5 182 aa15.64■□□□□ 0.09
VPS33B-206ENST00000557358 AIFM3Q96NN9 605 aa15.64■□□□□ 0.09
VPS33B-206ENST00000557358 TEKT3Q9BXF9 490 aa15.64■□□□□ 0.09
VPS33B-206ENST00000557358 RNPEPQ9H4A4 650 aa15.64■□□□□ 0.09
VPS33B-206ENST00000557358 SETD4Q9NVD3 440 aa15.64■□□□□ 0.09
VPS33B-206ENST00000557358 SLC4A7Q9Y6M7 1214 aa15.64■□□□□ 0.09
VPS33B-206ENST00000557358 IGLV3-22A0A075B6J6 115 aa15.63■□□□□ 0.09
VPS33B-206ENST00000557358 SOX1O00570 391 aaPredicted RBP15.63■□□□□ 0.09
VPS33B-206ENST00000557358 LGR5O75473 907 aa15.63■□□□□ 0.09
VPS33B-206ENST00000557358 GCFC2P16383 781 aaKnown RBP15.63■□□□□ 0.09
VPS33B-206ENST00000557358 KCNJ6P48051 423 aa15.63■□□□□ 0.09
VPS33B-206ENST00000557358 RBL2Q08999 1139 aa15.63■□□□□ 0.09
VPS33B-206ENST00000557358 ITGB3BPQ13352 177 aaPredicted RBP15.63■□□□□ 0.09
VPS33B-206ENST00000557358 GRIK4Q16099 956 aa15.63■□□□□ 0.09
VPS33B-206ENST00000557358 PDXDC2PQ6P474 469 aa15.63■□□□□ 0.09
VPS33B-206ENST00000557358 NEK8Q86SG6 692 aa15.63■□□□□ 0.09
VPS33B-206ENST00000557358 NSUN7Q8NE18 718 aaKnown RBP15.63■□□□□ 0.09
VPS33B-206ENST00000557358 RIT2Q99578 217 aa15.63■□□□□ 0.09
VPS33B-206ENST00000557358 ZNF302Q9NR11 478 aa15.63■□□□□ 0.09
VPS33B-206ENST00000557358 MSRAQ9UJ68 235 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms