RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 NRCAMQ92823 1304 aa18.23■□□□□ 0.51
TUBB3-213ENST00000557262 PTPRSQ13332 1948 aa18.23■□□□□ 0.51
TUBB3-213ENST00000557262 LINC01553A4QN01 128 aa18.23■□□□□ 0.51
TUBB3-213ENST00000557262 KCNA2P16389 499 aa18.23■□□□□ 0.51
TUBB3-213ENST00000557262 TCF7P36402 384 aaPredicted RBP18.23■□□□□ 0.51
TUBB3-213ENST00000557262 ARHGAP4P98171 946 aa18.23■□□□□ 0.51
TUBB3-213ENST00000557262 EXOSC10Q01780 885 aaKnown RBP18.23■□□□□ 0.51
TUBB3-213ENST00000557262 TFF2Q03403 129 aa18.23■□□□□ 0.51
TUBB3-213ENST00000557262 MKRN4PQ13434 485 aaPredicted RBP18.23■□□□□ 0.51
TUBB3-213ENST00000557262 UBE2SQ16763 222 aa18.23■□□□□ 0.51
TUBB3-213ENST00000557262 MICU3Q86XE3 530 aa18.23■□□□□ 0.51
TUBB3-213ENST00000557262 UHRF1Q96T88 793 aaPredicted RBP18.23■□□□□ 0.51
TUBB3-213ENST00000557262 SUGCTQ9HAC7 445 aa18.23■□□□□ 0.51
TUBB3-213ENST00000557262 GSTTP1A0A1W2PQM5 241 aa18.22■□□□□ 0.51
TUBB3-213ENST00000557262 RBAK-RBAKDNI3L0D1 243 aa18.22■□□□□ 0.51
TUBB3-213ENST00000557262 CTSHP09668 335 aa18.22■□□□□ 0.51
TUBB3-213ENST00000557262 TSGA10IPQ3SY00 556 aa18.22■□□□□ 0.51
TUBB3-213ENST00000557262 FAM26DQ5JW98 314 aa18.22■□□□□ 0.51
TUBB3-213ENST00000557262 APOA5Q6Q788 366 aa18.22■□□□□ 0.51
TUBB3-213ENST00000557262 CENPQQ7L2Z9 268 aaPredicted RBP18.22■□□□□ 0.51
TUBB3-213ENST00000557262 DHX32Q7L7V1 743 aaKnown RBP18.22■□□□□ 0.51
TUBB3-213ENST00000557262 HEATR3Q7Z4Q2 680 aa18.22■□□□□ 0.51
TUBB3-213ENST00000557262 MYOCDQ8IZQ8 938 aa18.22■□□□□ 0.51
TUBB3-213ENST00000557262 LMBR1Q8WVP7 490 aa18.22■□□□□ 0.51
TUBB3-213ENST00000557262 EHMT1Q9H9B1 1298 aa18.22■□□□□ 0.51
TUBB3-213ENST00000557262 JADE2Q9NQC1 790 aa18.22■□□□□ 0.51
TUBB3-213ENST00000557262 RBM28Q9NW13 759 aaKnown RBP18.22■□□□□ 0.51
TUBB3-213ENST00000557262 HTRA4P83105 476 aaPredicted RBP18.21■□□□□ 0.51
TUBB3-213ENST00000557262 MTMR1Q13613 665 aa18.21■□□□□ 0.51
TUBB3-213ENST00000557262 TOP1MTQ969P6 601 aa18.21■□□□□ 0.51
TUBB3-213ENST00000557262 OSBPL7Q9BZF2 842 aa18.21■□□□□ 0.51
TUBB3-213ENST00000557262 SMARCAD1Q9H4L7 1026 aa18.21■□□□□ 0.51
TUBB3-213ENST00000557262 MTUS1Q9ULD2 1270 aa18.21■□□□□ 0.51
TUBB3-213ENST00000557262 RPAINQ86UA6 219 aa18.2■□□□□ 0.5
TUBB3-213ENST00000557262 SKAP1Q86WV1 359 aa18.2■□□□□ 0.5
TUBB3-213ENST00000557262 TEX2Q8IWB9 1127 aa18.2■□□□□ 0.5
TUBB3-213ENST00000557262 GDPD5Q8WTR4 605 aa18.2■□□□□ 0.5
TUBB3-213ENST00000557262 APBB2Q92870 758 aa18.2■□□□□ 0.5
TUBB3-213ENST00000557262 GLG1Q92896 1179 aa18.2■□□□□ 0.5
TUBB3-213ENST00000557262 HLA-CQ95604 372 aa18.2■□□□□ 0.5
TUBB3-213ENST00000557262 ERAP1Q9NZ08 941 aa18.2■□□□□ 0.5
TUBB3-213ENST00000557262 PKD2L1Q9P0L9 805 aa18.2■□□□□ 0.5
TUBB3-213ENST00000557262 BRPF3Q9ULD4 1205 aa18.2■□□□□ 0.5
TUBB3-213ENST00000557262 V9GY48 417 aaPredicted RBP18.2■□□□□ 0.5
TUBB3-213ENST00000557262 DOCK5Q9H7D0 1870 aa18.2■□□□□ 0.5
TUBB3-213ENST00000557262 ZBTB43O43298 467 aa18.19■□□□□ 0.5
TUBB3-213ENST00000557262 KCNQ1P51787 676 aa18.19■□□□□ 0.5
TUBB3-213ENST00000557262 PPFIA1Q13136 1202 aa18.19■□□□□ 0.5
TUBB3-213ENST00000557262 RTN1Q16799 776 aa18.19■□□□□ 0.5
TUBB3-213ENST00000557262 WWC2Q6AWC2 1192 aa18.19■□□□□ 0.5
TUBB3-213ENST00000557262 TAF2Q6P1X5 1199 aa18.19■□□□□ 0.5
TUBB3-213ENST00000557262 RASEFQ8IZ41 740 aa18.19■□□□□ 0.5
TUBB3-213ENST00000557262 SP7Q8TDD2 431 aaPredicted RBP18.19■□□□□ 0.5
TUBB3-213ENST00000557262 MXRA8Q9BRK3 442 aa18.19■□□□□ 0.5
TUBB3-213ENST00000557262 RIC8AQ9NPQ8 531 aa18.19■□□□□ 0.5
TUBB3-213ENST00000557262 NCOR1O75376 2440 aa18.18■□□□□ 0.5
TUBB3-213ENST00000557262 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.18■□□□□ 0.5
TUBB3-213ENST00000557262 UPP2O95045 317 aa18.18■□□□□ 0.5
TUBB3-213ENST00000557262 FOSP01100 380 aaPredicted RBP18.18■□□□□ 0.5
TUBB3-213ENST00000557262 CHRNA1P02708 482 aa18.18■□□□□ 0.5
TUBB3-213ENST00000557262 NAPAP54920 295 aa18.18■□□□□ 0.5
TUBB3-213ENST00000557262 FUT2Q10981 343 aa18.18■□□□□ 0.5
TUBB3-213ENST00000557262 KRT32Q14532 448 aa18.18■□□□□ 0.5
TUBB3-213ENST00000557262 GRIK4Q16099 956 aa18.18■□□□□ 0.5
TUBB3-213ENST00000557262 ADCK5Q3MIX3 580 aa18.18■□□□□ 0.5
TUBB3-213ENST00000557262 RSPH3Q86UC2 560 aa18.18■□□□□ 0.5
TUBB3-213ENST00000557262 TCEANC2Q96MN5 208 aa18.18■□□□□ 0.5
TUBB3-213ENST00000557262 IFIH1Q9BYX4 1025 aaKnown RBP18.18■□□□□ 0.5
TUBB3-213ENST00000557262 KCNH7Q9NS40 1196 aa18.18■□□□□ 0.5
TUBB3-213ENST00000557262 CNTNAP5Q8WYK1 1306 aa18.18■□□□□ 0.5
TUBB3-213ENST00000557262 hCG_1984214I3L0E3 225 aa18.17■□□□□ 0.5
TUBB3-213ENST00000557262 CDC45O75419 566 aa18.17■□□□□ 0.5
TUBB3-213ENST00000557262 HMGB1P09429 215 aaKnown RBP18.17■□□□□ 0.5
TUBB3-213ENST00000557262 MARK3P27448 753 aa18.17■□□□□ 0.5
TUBB3-213ENST00000557262 TYW1BQ6NUM6 668 aa18.17■□□□□ 0.5
TUBB3-213ENST00000557262 PPP1R18Q6NYC8 613 aa18.17■□□□□ 0.5
TUBB3-213ENST00000557262 RUFY4Q6ZNE9 571 aa18.17■□□□□ 0.5
TUBB3-213ENST00000557262 ZNF713Q8N859 430 aaPredicted RBP18.17■□□□□ 0.5
TUBB3-213ENST00000557262 FBXO22Q8NEZ5 403 aa18.17■□□□□ 0.5
TUBB3-213ENST00000557262 TNPO1Q92973 898 aaKnown RBP18.17■□□□□ 0.5
TUBB3-213ENST00000557262 SAMD11Q96NU1 681 aa18.17■□□□□ 0.5
TUBB3-213ENST00000557262 YME1L1Q96TA2 773 aa18.17■□□□□ 0.5
TUBB3-213ENST00000557262 C17orf80Q9BSJ5 609 aa18.17■□□□□ 0.5
TUBB3-213ENST00000557262 JPH1Q9HDC5 661 aaPredicted RBP18.17■□□□□ 0.5
TUBB3-213ENST00000557262 SLC9A2Q9UBY0 812 aa18.17■□□□□ 0.5
TUBB3-213ENST00000557262 TCF20Q9UGU0 1960 aaKnown RBP18.17■□□□□ 0.5
TUBB3-213ENST00000557262 KAT6AQ92794 2004 aa18.16■□□□□ 0.5
TUBB3-213ENST00000557262 MBLAC1A4D2B0 266 aaPredicted RBP18.16■□□□□ 0.5
TUBB3-213ENST00000557262 SMCO2A6NFE2 343 aa18.16■□□□□ 0.5
TUBB3-213ENST00000557262 RRN3P2A6NIE6 340 aa18.16■□□□□ 0.5
TUBB3-213ENST00000557262 ADCY7P51828 1080 aa18.16■□□□□ 0.5
TUBB3-213ENST00000557262 MARCH8Q5T0T0 291 aa18.16■□□□□ 0.5
TUBB3-213ENST00000557262 CYP2W1Q8TAV3 490 aa18.16■□□□□ 0.5
TUBB3-213ENST00000557262 NECAB3Q96P71 396 aaPredicted RBP18.16■□□□□ 0.5
TUBB3-213ENST00000557262 PCYT2Q99447 389 aa18.16■□□□□ 0.5
TUBB3-213ENST00000557262 SDF4Q9BRK5 362 aa18.16■□□□□ 0.5
TUBB3-213ENST00000557262 GLT8D2Q9H1C3 349 aa18.16■□□□□ 0.5
TUBB3-213ENST00000557262 AZI2Q9H6S1 392 aa18.16■□□□□ 0.5
TUBB3-213ENST00000557262 FAM217BQ9NTX9 383 aaPredicted RBP18.16■□□□□ 0.5
TUBB3-213ENST00000557262 TUBE1Q9UJT0 475 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 1000.8 ms