RNA–Protein interactions for RNA: ENST00000557159.5

APEX1-216, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 2

Gene APEX1, Length 1,803 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-216ENST00000557159 NDST4Q9H3R1 872 aa13.8□□□□□ -0.2
APEX1-216ENST00000557159 CNOT10Q9H9A5 744 aaKnown RBP13.8□□□□□ -0.2
APEX1-216ENST00000557159 PIM2Q9P1W9 311 aa13.8□□□□□ -0.2
APEX1-216ENST00000557159 SALL4Q9UJQ4 1053 aa13.8□□□□□ -0.2
APEX1-216ENST00000557159 TAF1P21675 1872 aa13.79□□□□□ -0.2
APEX1-216ENST00000557159 ORC4O43929 436 aa13.79□□□□□ -0.2
APEX1-216ENST00000557159 RTN2O75298 545 aa13.79□□□□□ -0.2
APEX1-216ENST00000557159 SCTRP47872 440 aa13.79□□□□□ -0.2
APEX1-216ENST00000557159 C1QTNF8P60827 252 aa13.79□□□□□ -0.2
APEX1-216ENST00000557159 HGSNATQ68CP4 663 aa13.79□□□□□ -0.2
APEX1-216ENST00000557159 SRBD1Q8N5C6 995 aaKnown RBP13.79□□□□□ -0.2
APEX1-216ENST00000557159 TTLL6Q8N841 843 aa13.79□□□□□ -0.2
APEX1-216ENST00000557159 USP38Q8NB14 1042 aa13.79□□□□□ -0.2
APEX1-216ENST00000557159 CCHCR1Q8TD31 782 aa13.79□□□□□ -0.2
APEX1-216ENST00000557159 FAXDC2Q96IV6 333 aa13.79□□□□□ -0.2
APEX1-216ENST00000557159 SEC16BQ96JE7 1060 aa13.79□□□□□ -0.2
APEX1-216ENST00000557159 RIOK1Q9BRS2 568 aaKnown RBP13.79□□□□□ -0.2
APEX1-216ENST00000557159 TPX2Q9ULW0 747 aaKnown RBP13.79□□□□□ -0.2
APEX1-216ENST00000557159 PCDHA4Q9UN74 947 aa13.79□□□□□ -0.2
APEX1-216ENST00000557159 COL4A1P02462 1669 aa13.78□□□□□ -0.2
APEX1-216ENST00000557159 DNM1LO00429 736 aa13.78□□□□□ -0.2
APEX1-216ENST00000557159 CXCR5P32302 372 aa13.78□□□□□ -0.2
APEX1-216ENST00000557159 PPP2R2AP63151 447 aa13.78□□□□□ -0.2
APEX1-216ENST00000557159 LRRC63Q05C16 580 aa13.78□□□□□ -0.2
APEX1-216ENST00000557159 ORC2Q13416 577 aaPredicted RBP13.78□□□□□ -0.2
APEX1-216ENST00000557159 CCT6BQ92526 530 aa13.78□□□□□ -0.2
APEX1-216ENST00000557159 PBKQ96KB5 322 aa13.78□□□□□ -0.2
APEX1-216ENST00000557159 LEMD3Q9Y2U8 911 aa13.78□□□□□ -0.2
APEX1-216ENST00000557159 FLT1P17948 1338 aa13.78□□□□□ -0.2
APEX1-216ENST00000557159 LRRC53A6NM62 1247 aa13.78□□□□□ -0.2
APEX1-216ENST00000557159 SERPING1P05155 500 aa13.78□□□□□ -0.2
APEX1-216ENST00000557159 ECHS1P30084 290 aa13.78□□□□□ -0.2
APEX1-216ENST00000557159 HSD17B3P37058 310 aa13.78□□□□□ -0.2
APEX1-216ENST00000557159 PDE4DQ08499 809 aa13.78□□□□□ -0.2
APEX1-216ENST00000557159 C10orf76Q5T2E6 689 aa13.78□□□□□ -0.2
APEX1-216ENST00000557159 GKAP1Q5VSY0 366 aaPredicted RBP13.78□□□□□ -0.2
APEX1-216ENST00000557159 MAATS1Q7Z4T9 603 aa13.78□□□□□ -0.2
APEX1-216ENST00000557159 MIGA1Q8NAN2 632 aa13.78□□□□□ -0.2
APEX1-216ENST00000557159 ZNF784Q8NCA9 323 aaPredicted RBP13.78□□□□□ -0.2
APEX1-216ENST00000557159 ACTRT1Q8TDG2 376 aa13.78□□□□□ -0.2
APEX1-216ENST00000557159 SCFD2Q8WU76 684 aa13.78□□□□□ -0.2
APEX1-216ENST00000557159 IFT81Q8WYA0 676 aa13.78□□□□□ -0.2
APEX1-216ENST00000557159 SEC14L1Q92503 715 aa13.78□□□□□ -0.2
APEX1-216ENST00000557159 ATP8A2Q9NTI2 1148 aa13.78□□□□□ -0.2
APEX1-216ENST00000557159 CACNA1SQ13698 1873 aa13.77□□□□□ -0.2
APEX1-216ENST00000557159 LAMB1P07942 1786 aa13.77□□□□□ -0.21
APEX1-216ENST00000557159 PVALEFA0A1B0GWK0 134 aa13.77□□□□□ -0.21
APEX1-216ENST00000557159 NCK2O43639 380 aa13.77□□□□□ -0.21
APEX1-216ENST00000557159 KIF5BP33176 963 aa13.77□□□□□ -0.21
APEX1-216ENST00000557159 IRX1P78414 480 aaPredicted RBP13.77□□□□□ -0.21
APEX1-216ENST00000557159 ZNF844Q08AG5 666 aa13.77□□□□□ -0.21
APEX1-216ENST00000557159 STK4Q13043 487 aa13.77□□□□□ -0.21
APEX1-216ENST00000557159 BYSLQ13895 437 aaKnown RBP13.77□□□□□ -0.21
APEX1-216ENST00000557159 SLC9C1Q4G0N8 1177 aa13.77□□□□□ -0.21
APEX1-216ENST00000557159 TMC4Q7Z404 712 aa13.77□□□□□ -0.21
APEX1-216ENST00000557159 GUF1Q8N442 669 aaKnown RBP13.77□□□□□ -0.21
APEX1-216ENST00000557159 C7orf43Q8WVR3 580 aa13.77□□□□□ -0.21
APEX1-216ENST00000557159 KRT12Q99456 494 aa13.77□□□□□ -0.21
APEX1-216ENST00000557159 HINFPQ9BQA5 517 aa13.77□□□□□ -0.21
APEX1-216ENST00000557159 EBF2Q9HAK2 575 aa13.77□□□□□ -0.21
APEX1-216ENST00000557159 SMARCAL1Q9NZC9 954 aa13.77□□□□□ -0.21
APEX1-216ENST00000557159 EHD2Q9NZN4 543 aa13.77□□□□□ -0.21
APEX1-216ENST00000557159 CEP72Q9P209 647 aa13.77□□□□□ -0.21
APEX1-216ENST00000557159 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.77□□□□□ -0.21
APEX1-216ENST00000557159 CCDC88AQ3V6T2 1871 aa13.77□□□□□ -0.21
APEX1-216ENST00000557159 CCDC188H7C350 402 aa13.76□□□□□ -0.21
APEX1-216ENST00000557159 PPIP5K2O43314 1243 aa13.76□□□□□ -0.21
APEX1-216ENST00000557159 RAD51CO43502 376 aa13.76□□□□□ -0.21
APEX1-216ENST00000557159 EIF3BP55884 814 aaKnown RBP13.76□□□□□ -0.21
APEX1-216ENST00000557159 RRAGAQ7L523 313 aa13.76□□□□□ -0.21
APEX1-216ENST00000557159 NSUN4Q96CB9 384 aaKnown RBP13.76□□□□□ -0.21
APEX1-216ENST00000557159 MS4A14Q96JA4 679 aa13.76□□□□□ -0.21
APEX1-216ENST00000557159 CRNKL1Q9BZJ0 848 aaKnown RBP13.76□□□□□ -0.21
APEX1-216ENST00000557159 PPANQ9NQ55 473 aaKnown RBP13.76□□□□□ -0.21
APEX1-216ENST00000557159 BRCA1P38398 1863 aaKnown RBP13.76□□□□□ -0.21
APEX1-216ENST00000557159 SLX4Q8IY92 1834 aa13.76□□□□□ -0.21
APEX1-216ENST00000557159 CFAP73A6NFT4 308 aa13.76□□□□□ -0.21
APEX1-216ENST00000557159 PPEF1O14829 653 aaPredicted RBP13.76□□□□□ -0.21
APEX1-216ENST00000557159 EPHB6O15197 1021 aa13.76□□□□□ -0.21
APEX1-216ENST00000557159 SCP2P22307 547 aa13.76□□□□□ -0.21
APEX1-216ENST00000557159 SLC1A4P43007 532 aa13.76□□□□□ -0.21
APEX1-216ENST00000557159 GUCY2FP51841 1108 aa13.76□□□□□ -0.21
APEX1-216ENST00000557159 RASSF7Q02833 373 aa13.76□□□□□ -0.21
APEX1-216ENST00000557159 ITIH4Q14624 930 aa13.76□□□□□ -0.21
APEX1-216ENST00000557159 ZKSCAN8Q15776 578 aaPredicted RBP13.76□□□□□ -0.21
APEX1-216ENST00000557159 UAP1Q16222 522 aaPredicted RBP13.76□□□□□ -0.21
APEX1-216ENST00000557159 C11orf91Q3C1V1 193 aa13.76□□□□□ -0.21
APEX1-216ENST00000557159 DALRD3Q5D0E6 543 aaKnown RBP13.76□□□□□ -0.21
APEX1-216ENST00000557159 SP8Q8IXZ3 490 aa13.76□□□□□ -0.21
APEX1-216ENST00000557159 WDR66Q8TBY9 1149 aa13.76□□□□□ -0.21
APEX1-216ENST00000557159 SEMA6BQ9H3T3 888 aa13.76□□□□□ -0.21
APEX1-216ENST00000557159 TCP11L1Q9NUJ3 509 aa13.76□□□□□ -0.21
APEX1-216ENST00000557159 ATP6V0A2Q9Y487 856 aa13.76□□□□□ -0.21
APEX1-216ENST00000557159 hCG_1642624A0A1W2PR95 340 aa13.75□□□□□ -0.21
APEX1-216ENST00000557159 ZSCAN5CA6NGD5 496 aaPredicted RBP13.75□□□□□ -0.21
APEX1-216ENST00000557159 MINDY4BA8MYZ0 360 aa13.75□□□□□ -0.21
APEX1-216ENST00000557159 ASAP2O43150 1006 aa13.75□□□□□ -0.21
APEX1-216ENST00000557159 PALMO75781 387 aa13.75□□□□□ -0.21
APEX1-216ENST00000557159 MRPS25P82663 173 aaKnown RBP13.75□□□□□ -0.21
APEX1-216ENST00000557159 LMNB2Q03252 620 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms