RNA–Protein interactions for RNA: ENST00000557143.1

KLC1-222, Transcript of kinesin light chain 1, human

TSL 2

Gene KLC1, Length 701 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KLC1-222	ENST00000557143	FIBP	O43427	364 aa		13.81	□□□□□ -0.2
KLC1-222	ENST00000557143	EDIL3	O43854	480 aa		13.81	□□□□□ -0.2
KLC1-222	ENST00000557143	KPNA6	O60684	536 aa		13.81	□□□□□ -0.2
KLC1-222	ENST00000557143	AR	P10275	920 aa		13.81	□□□□□ -0.2
KLC1-222	ENST00000557143	TGFB3	P10600	412 aa		13.81	□□□□□ -0.2
KLC1-222	ENST00000557143	HOXD8	P13378	290 aa	Predicted RBP	13.81	□□□□□ -0.2
KLC1-222	ENST00000557143	IFNAR1	P17181	557 aa		13.81	□□□□□ -0.2
KLC1-222	ENST00000557143	CLK2	P49760	499 aa	Known RBP	13.81	□□□□□ -0.2
KLC1-222	ENST00000557143	TMEM240	Q5SV17	173 aa		13.81	□□□□□ -0.2
KLC1-222	ENST00000557143	TRIM50	Q86XT4	487 aa		13.81	□□□□□ -0.2
KLC1-222	ENST00000557143	KRI1	Q8N9T8	703 aa	Known RBP	13.81	□□□□□ -0.2
KLC1-222	ENST00000557143	DHX38	Q92620	1227 aa	Known RBP	13.81	□□□□□ -0.2
KLC1-222	ENST00000557143	WNT8B	Q93098	351 aa		13.81	□□□□□ -0.2
KLC1-222	ENST00000557143	ANO3	Q9BYT9	981 aa		13.81	□□□□□ -0.2
KLC1-222	ENST00000557143	SLC24A3	Q9HC58	644 aa		13.81	□□□□□ -0.2
KLC1-222	ENST00000557143	VPS54	Q9P1Q0	977 aa		13.81	□□□□□ -0.2
KLC1-222	ENST00000557143	CCDC196	A0A1B0GTZ2	297 aa		13.8	□□□□□ -0.2
KLC1-222	ENST00000557143	SPDYE3	A6NKU9	549 aa		13.8	□□□□□ -0.2
KLC1-222	ENST00000557143	PPFIA4	O75335	1185 aa		13.8	□□□□□ -0.2
KLC1-222	ENST00000557143	LARGE1	O95461	756 aa		13.8	□□□□□ -0.2
KLC1-222	ENST00000557143	KCNA2	P16389	499 aa		13.8	□□□□□ -0.2
KLC1-222	ENST00000557143	AK2	P54819	239 aa		13.8	□□□□□ -0.2
KLC1-222	ENST00000557143	KIAA0753	Q2KHM9	967 aa		13.8	□□□□□ -0.2
KLC1-222	ENST00000557143	UTP14C	Q5TAP6	766 aa	Known RBP	13.8	□□□□□ -0.2
KLC1-222	ENST00000557143	NFRKB	Q6P4R8	1299 aa		13.8	□□□□□ -0.2
KLC1-222	ENST00000557143	KCNV1	Q6PIU1	500 aa		13.8	□□□□□ -0.2
KLC1-222	ENST00000557143	ZNF365	Q70YC5	407 aa		13.8	□□□□□ -0.2
KLC1-222	ENST00000557143	NECAB1	Q8N987	351 aa		13.8	□□□□□ -0.2
KLC1-222	ENST00000557143	ZNF274	Q96GC6	653 aa	Predicted RBP	13.8	□□□□□ -0.2
KLC1-222	ENST00000557143	GPR20	Q99678	358 aa		13.8	□□□□□ -0.2
KLC1-222	ENST00000557143	GJB4	Q9NTQ9	266 aa		13.8	□□□□□ -0.2
KLC1-222	ENST00000557143	LTBP2	Q14767	1821 aa		13.79	□□□□□ -0.2
KLC1-222	ENST00000557143	GSTTP1	A0A1W2PQM5	241 aa		13.79	□□□□□ -0.2
KLC1-222	ENST00000557143	GRXCR1	A8MXD5	290 aa		13.79	□□□□□ -0.2
KLC1-222	ENST00000557143	CTDNEP1	O95476	244 aa		13.79	□□□□□ -0.2
KLC1-222	ENST00000557143	F2	P00734	622 aa		13.79	□□□□□ -0.2
KLC1-222	ENST00000557143	LGALS2	P05162	132 aa		13.79	□□□□□ -0.2
KLC1-222	ENST00000557143	SCRN1	Q12765	414 aa		13.79	□□□□□ -0.2
KLC1-222	ENST00000557143	GPNMB	Q14956	572 aa		13.79	□□□□□ -0.2
KLC1-222	ENST00000557143	PTGIS	Q16647	500 aa		13.79	□□□□□ -0.2
KLC1-222	ENST00000557143	GNPTAB	Q3T906	1256 aa		13.79	□□□□□ -0.2
KLC1-222	ENST00000557143	C8orf34	Q49A92	452 aa		13.79	□□□□□ -0.2
KLC1-222	ENST00000557143	PPP1R18	Q6NYC8	613 aa		13.79	□□□□□ -0.2
KLC1-222	ENST00000557143	XRRA1	Q6P2D8	792 aa		13.79	□□□□□ -0.2
KLC1-222	ENST00000557143	MXRA8	Q9BRK3	442 aa		13.79	□□□□□ -0.2
KLC1-222	ENST00000557143	JADE2	Q9NQC1	790 aa		13.79	□□□□□ -0.2
KLC1-222	ENST00000557143	CXXC1	Q9P0U4	656 aa	Predicted RBP	13.79	□□□□□ -0.2
KLC1-222	ENST00000557143	STAM2	O75886	525 aa		13.78	□□□□□ -0.2
KLC1-222	ENST00000557143	MTMR1	Q13613	665 aa		13.78	□□□□□ -0.2
KLC1-222	ENST00000557143	TCTN1	Q2MV58	587 aa		13.78	□□□□□ -0.2
KLC1-222	ENST00000557143	VARS2	Q5ST30	1063 aa	Known RBP	13.78	□□□□□ -0.2
KLC1-222	ENST00000557143	METTL7B	Q6UX53	244 aa		13.78	□□□□□ -0.2
KLC1-222	ENST00000557143	DEFB128	Q7Z7B8	93 aa		13.78	□□□□□ -0.2
KLC1-222	ENST00000557143	NLRX1	Q86UT6	975 aa		13.78	□□□□□ -0.2
KLC1-222	ENST00000557143	TMEM199	Q8N511	208 aa		13.78	□□□□□ -0.2
KLC1-222	ENST00000557143	C7orf31	Q8N865	590 aa		13.78	□□□□□ -0.2
KLC1-222	ENST00000557143	GPRASP2	Q96D09	838 aa		13.78	□□□□□ -0.2
KLC1-222	ENST00000557143	RNPC3	Q96LT9	517 aa	Known RBP	13.78	□□□□□ -0.2
KLC1-222	ENST00000557143	FAM161B	Q96MY7	647 aa		13.78	□□□□□ -0.2
KLC1-222	ENST00000557143	RNF26	Q9BY78	433 aa	Predicted RBP	13.78	□□□□□ -0.2
KLC1-222	ENST00000557143	OSBPL7	Q9BZF2	842 aa		13.78	□□□□□ -0.2
KLC1-222	ENST00000557143	ZMYND12	Q9H0C1	365 aa		13.78	□□□□□ -0.2
KLC1-222	ENST00000557143	RNPEP	Q9H4A4	650 aa		13.78	□□□□□ -0.2
KLC1-222	ENST00000557143	IL23A	Q9NPF7	189 aa		13.78	□□□□□ -0.2
KLC1-222	ENST00000557143	KCNH7	Q9NS40	1196 aa		13.78	□□□□□ -0.2
KLC1-222	ENST00000557143	GTF2IRD1	Q9UHL9	959 aa		13.78	□□□□□ -0.2
KLC1-222	ENST00000557143	MYH6	P13533	1939 aa		13.78	□□□□□ -0.2
KLC1-222	ENST00000557143	PPP1R3G	B7ZBB8	358 aa		13.77	□□□□□ -0.21
KLC1-222	ENST00000557143	FAM86B1	E9PN63	330 aa		13.77	□□□□□ -0.21
KLC1-222	ENST00000557143		H3BRB1	525 aa		13.77	□□□□□ -0.21
KLC1-222	ENST00000557143	NOP56	O00567	594 aa	Known RBP	13.77	□□□□□ -0.21
KLC1-222	ENST00000557143	FAM86B2	P0C5J1	330 aa		13.77	□□□□□ -0.21
KLC1-222	ENST00000557143	SREBF1	P36956	1147 aa		13.77	□□□□□ -0.21
KLC1-222	ENST00000557143	ARHGAP4	P98171	946 aa		13.77	□□□□□ -0.21
KLC1-222	ENST00000557143	SSRP1	Q08945	709 aa	Known RBP	13.77	□□□□□ -0.21
KLC1-222	ENST00000557143	ITGB3BP	Q13352	177 aa	Predicted RBP	13.77	□□□□□ -0.21
KLC1-222	ENST00000557143	NEDD9	Q14511	834 aa		13.77	□□□□□ -0.21
KLC1-222	ENST00000557143	OTOP2	Q7RTS6	562 aa		13.77	□□□□□ -0.21
KLC1-222	ENST00000557143	CRYGN	Q8WXF5	182 aa		13.77	□□□□□ -0.21
KLC1-222	ENST00000557143	MARVELD3	Q96A59	401 aa		13.77	□□□□□ -0.21
KLC1-222	ENST00000557143	ZBTB10	Q96DT7	871 aa		13.77	□□□□□ -0.21
KLC1-222	ENST00000557143	IL17RA	Q96F46	866 aa		13.77	□□□□□ -0.21
KLC1-222	ENST00000557143	PCYT2	Q99447	389 aa		13.77	□□□□□ -0.21
KLC1-222	ENST00000557143	TUT1	Q9H6E5	874 aa	Known RBP	13.77	□□□□□ -0.21
KLC1-222	ENST00000557143	SETD4	Q9NVD3	440 aa		13.77	□□□□□ -0.21
KLC1-222	ENST00000557143	KCNJ14	Q9UNX9	436 aa		13.77	□□□□□ -0.21
KLC1-222	ENST00000557143	hCG_1984214	I3L0E3	225 aa		13.76	□□□□□ -0.21
KLC1-222	ENST00000557143	MEIS1	O00470	390 aa		13.76	□□□□□ -0.21
KLC1-222	ENST00000557143	PFKFB2	O60825	505 aa		13.76	□□□□□ -0.21
KLC1-222	ENST00000557143	FOS	P01100	380 aa	Predicted RBP	13.76	□□□□□ -0.21
KLC1-222	ENST00000557143	SUPT20HL2	P0C7V6	817 aa		13.76	□□□□□ -0.21
KLC1-222	ENST00000557143	NEK4	P51957	841 aa		13.76	□□□□□ -0.21
KLC1-222	ENST00000557143	ANAPC15	P60006	121 aa		13.76	□□□□□ -0.21
KLC1-222	ENST00000557143	AKAP17A	Q02040	695 aa	Known RBP	13.76	□□□□□ -0.21
KLC1-222	ENST00000557143	PTPN11	Q06124	597 aa	Predicted RBP	13.76	□□□□□ -0.21
KLC1-222	ENST00000557143	PPIG	Q13427	754 aa	Known RBP eCLIP	13.76	□□□□□ -0.21
KLC1-222	ENST00000557143	NPY5R	Q15761	445 aa		13.76	□□□□□ -0.21
KLC1-222	ENST00000557143	ME3	Q16798	604 aa		13.76	□□□□□ -0.21
KLC1-222	ENST00000557143	TRIM71	Q2Q1W2	868 aa	Known RBP	13.76	□□□□□ -0.21
KLC1-222	ENST00000557143	CEP55	Q53EZ4	464 aa		13.76	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms