RNA–Protein interactions for RNA: ENST00000556909.1

VIPAS39-209, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-209ENST00000556909 NLRX1Q86UT6 975 aa21.07■□□□□ 0.96
VIPAS39-209ENST00000556909 APBB2Q92870 758 aa21.07■□□□□ 0.96
VIPAS39-209ENST00000556909 IFIH1Q9BYX4 1025 aaKnown RBP21.07■□□□□ 0.96
VIPAS39-209ENST00000556909 CD320Q9NPF0 282 aa21.07■□□□□ 0.96
VIPAS39-209ENST00000556909 LOXHD1Q8IVV2 1947 aa21.07■□□□□ 0.96
VIPAS39-209ENST00000556909 PLEKHA8P1O95397 391 aa21.06■□□□□ 0.96
VIPAS39-209ENST00000556909 SMARCA1P28370 1054 aa21.06■□□□□ 0.96
VIPAS39-209ENST00000556909 PTPROQ16827 1216 aa21.06■□□□□ 0.96
VIPAS39-209ENST00000556909 TIGD5Q53EQ6 642 aa21.06■□□□□ 0.96
VIPAS39-209ENST00000556909 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.06■□□□□ 0.96
VIPAS39-209ENST00000556909 SUPT16HQ9Y5B9 1047 aaKnown RBP21.06■□□□□ 0.96
VIPAS39-209ENST00000556909 NRCAMQ92823 1304 aa21.05■□□□□ 0.96
VIPAS39-209ENST00000556909 H3BNC9 293 aa21.05■□□□□ 0.96
VIPAS39-209ENST00000556909 PRC1O43663 620 aa21.05■□□□□ 0.96
VIPAS39-209ENST00000556909 KCNA2P16389 499 aa21.05■□□□□ 0.96
VIPAS39-209ENST00000556909 TCF7P36402 384 aaPredicted RBP21.05■□□□□ 0.96
VIPAS39-209ENST00000556909 TMEM31Q5JXX7 168 aa21.05■□□□□ 0.96
VIPAS39-209ENST00000556909 CASC1Q6TDU7 716 aa21.05■□□□□ 0.96
VIPAS39-209ENST00000556909 RUFY4Q6ZNE9 571 aa21.05■□□□□ 0.96
VIPAS39-209ENST00000556909 TMEM192Q8IY95 271 aa21.05■□□□□ 0.96
VIPAS39-209ENST00000556909 SRBD1Q8N5C6 995 aaKnown RBP21.05■□□□□ 0.96
VIPAS39-209ENST00000556909 GIMAP8Q8ND71 665 aaPredicted RBP21.05■□□□□ 0.96
VIPAS39-209ENST00000556909 GPRASP2Q96D09 838 aa21.05■□□□□ 0.96
VIPAS39-209ENST00000556909 FAM122AQ96E09 287 aa21.05■□□□□ 0.96
VIPAS39-209ENST00000556909 LZTS2Q9BRK4 669 aa21.05■□□□□ 0.96
VIPAS39-209ENST00000556909 MTA3Q9BTC8 594 aa21.05■□□□□ 0.96
VIPAS39-209ENST00000556909 KIAA1671Q9BY89 1806 aa21.05■□□□□ 0.96
VIPAS39-209ENST00000556909 TTC3P53804 2025 aa21.05■□□□□ 0.96
VIPAS39-209ENST00000556909 SH2B2O14492 632 aaPredicted RBP21.04■□□□□ 0.96
VIPAS39-209ENST00000556909 ATP9AO75110 1047 aa21.04■□□□□ 0.96
VIPAS39-209ENST00000556909 CHRNA1P02708 482 aa21.04■□□□□ 0.96
VIPAS39-209ENST00000556909 GPM6BQ13491 265 aa21.04■□□□□ 0.96
VIPAS39-209ENST00000556909 CMTR1Q8N1G2 835 aaKnown RBP21.04■□□□□ 0.96
VIPAS39-209ENST00000556909 C11orf16Q9NQ32 467 aa21.04■□□□□ 0.96
VIPAS39-209ENST00000556909 IL9P15248 144 aa21.03■□□□□ 0.96
VIPAS39-209ENST00000556909 ITGB5P18084 799 aa21.03■□□□□ 0.96
VIPAS39-209ENST00000556909 RXRAP19793 462 aa21.03■□□□□ 0.96
VIPAS39-209ENST00000556909 GNAQP50148 359 aa21.03■□□□□ 0.96
VIPAS39-209ENST00000556909 MGAT3Q09327 533 aa21.03■□□□□ 0.96
VIPAS39-209ENST00000556909 PPFIA1Q13136 1202 aa21.03■□□□□ 0.96
VIPAS39-209ENST00000556909 COL9A3Q14050 684 aaPredicted RBP21.03■□□□□ 0.96
VIPAS39-209ENST00000556909 PTCRAQ6ISU1 281 aaPredicted RBP21.03■□□□□ 0.96
VIPAS39-209ENST00000556909 TAF2Q6P1X5 1199 aa21.03■□□□□ 0.96
VIPAS39-209ENST00000556909 NFXL1Q6ZNB6 911 aa21.03■□□□□ 0.96
VIPAS39-209ENST00000556909 RPAINQ86UA6 219 aa21.03■□□□□ 0.96
VIPAS39-209ENST00000556909 FAM178BQ8IXR5 827 aa21.03■□□□□ 0.96
VIPAS39-209ENST00000556909 BANK1Q8NDB2 785 aa21.03■□□□□ 0.96
VIPAS39-209ENST00000556909 CDHR1Q96JP9 859 aa21.03■□□□□ 0.96
VIPAS39-209ENST00000556909 GSTTP1A0A1W2PQM5 241 aa21.02■□□□□ 0.96
VIPAS39-209ENST00000556909 FAM86C2PA6NEL3 165 aa21.02■□□□□ 0.96
VIPAS39-209ENST00000556909 GHRP10912 638 aa21.02■□□□□ 0.96
VIPAS39-209ENST00000556909 MCM5P33992 734 aa21.02■□□□□ 0.96
VIPAS39-209ENST00000556909 TCEAL5Q5H9L2 206 aa21.02■□□□□ 0.96
VIPAS39-209ENST00000556909 NEK9Q8TD19 979 aa21.02■□□□□ 0.96
VIPAS39-209ENST00000556909 TMEM87BQ96K49 555 aa21.02■□□□□ 0.96
VIPAS39-209ENST00000556909 PSTPIP2Q9H939 334 aa21.02■□□□□ 0.96
VIPAS39-209ENST00000556909 EHMT1Q9H9B1 1298 aa21.02■□□□□ 0.96
VIPAS39-209ENST00000556909 ERAP1Q9NZ08 941 aa21.02■□□□□ 0.96
VIPAS39-209ENST00000556909 HCN4Q9Y3Q4 1203 aa21.02■□□□□ 0.96
VIPAS39-209ENST00000556909 CCDC69A6NI79 296 aa21.01■□□□□ 0.95
VIPAS39-209ENST00000556909 PI4K2BG5E9Z4 385 aa21.01■□□□□ 0.95
VIPAS39-209ENST00000556909 GPR37L1O60883 481 aa21.01■□□□□ 0.95
VIPAS39-209ENST00000556909 MARK3P27448 753 aa21.01■□□□□ 0.95
VIPAS39-209ENST00000556909 MTMR1Q13613 665 aa21.01■□□□□ 0.95
VIPAS39-209ENST00000556909 LPIN1Q14693 890 aa21.01■□□□□ 0.95
VIPAS39-209ENST00000556909 GRIK4Q16099 956 aa21.01■□□□□ 0.95
VIPAS39-209ENST00000556909 UBE2SQ16763 222 aa21.01■□□□□ 0.95
VIPAS39-209ENST00000556909 SEPT1Q8WYJ6 367 aa21.01■□□□□ 0.95
VIPAS39-209ENST00000556909 IL17RAQ96F46 866 aa21.01■□□□□ 0.95
VIPAS39-209ENST00000556909 NSUN3Q9H649 340 aaKnown RBP21.01■□□□□ 0.95
VIPAS39-209ENST00000556909 PKD2L1Q9P0L9 805 aa21.01■□□□□ 0.95
VIPAS39-209ENST00000556909 TUBE1Q9UJT0 475 aa21.01■□□□□ 0.95
VIPAS39-209ENST00000556909 UBIAD1Q9Y5Z9 338 aa21.01■□□□□ 0.95
VIPAS39-209ENST00000556909 hCG_1642624A0A1W2PR95 340 aa21■□□□□ 0.95
VIPAS39-209ENST00000556909 MBLAC1A4D2B0 266 aaPredicted RBP21■□□□□ 0.95
VIPAS39-209ENST00000556909 GRXCR2A6NFK2 248 aa21■□□□□ 0.95
VIPAS39-209ENST00000556909 H3BQ06 376 aaPredicted RBP21■□□□□ 0.95
VIPAS39-209ENST00000556909 CALM1P0DP23 149 aa21■□□□□ 0.95
VIPAS39-209ENST00000556909 CALM2P0DP24 149 aa21■□□□□ 0.95
VIPAS39-209ENST00000556909 CALM3P0DP25 149 aa21■□□□□ 0.95
VIPAS39-209ENST00000556909 CTNNB1P35222 781 aa21■□□□□ 0.95
VIPAS39-209ENST00000556909 COL19A1Q14993 1142 aa21■□□□□ 0.95
VIPAS39-209ENST00000556909 RAB11FIP4Q86YS3 637 aa21■□□□□ 0.95
VIPAS39-209ENST00000556909 GJD3Q8N144 294 aa21■□□□□ 0.95
VIPAS39-209ENST00000556909 TMTC2Q8N394 836 aa21■□□□□ 0.95
VIPAS39-209ENST00000556909 FIBCD1Q8N539 461 aa21■□□□□ 0.95
VIPAS39-209ENST00000556909 PABPC5Q96DU9 382 aaKnown RBP21■□□□□ 0.95
VIPAS39-209ENST00000556909 LSG1Q9H089 658 aaKnown RBP21■□□□□ 0.95
VIPAS39-209ENST00000556909 RC3H2Q9HBD1 1191 aaKnown RBP21■□□□□ 0.95
VIPAS39-209ENST00000556909 ADGRA3Q8IWK6 1321 aa21■□□□□ 0.95
VIPAS39-209ENST00000556909 C5orf42Q9H799 3197 aa20.99■□□□□ 0.95
VIPAS39-209ENST00000556909 SPDYE3A6NKU9 549 aa20.99■□□□□ 0.95
VIPAS39-209ENST00000556909 C5orf67F2Z3F1 127 aa20.99■□□□□ 0.95
VIPAS39-209ENST00000556909 LINC00271P0C7V0 271 aa20.99■□□□□ 0.95
VIPAS39-209ENST00000556909 LIFRP42702 1097 aa20.99■□□□□ 0.95
VIPAS39-209ENST00000556909 PUS10Q3MIT2 529 aaKnown RBP20.99■□□□□ 0.95
VIPAS39-209ENST00000556909 MARCH8Q5T0T0 291 aa20.99■□□□□ 0.95
VIPAS39-209ENST00000556909 RSPH3Q86UC2 560 aa20.99■□□□□ 0.95
VIPAS39-209ENST00000556909 DNAJB3Q8WWF6 145 aa20.99■□□□□ 0.95
VIPAS39-209ENST00000556909 GLG1Q92896 1179 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms