RNA–Protein interactions for RNA: ENST00000556827.1

HIF1A-209, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 2

Gene HIF1A, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-209ENST00000556827 SMARCA5O60264 1052 aaPredicted RBP7.45□□□□□ -1.22
HIF1A-209ENST00000556827 SLC6A11P48066 632 aa7.45□□□□□ -1.22
HIF1A-209ENST00000556827 GJA9P57773 515 aa7.45□□□□□ -1.22
HIF1A-209ENST00000556827 DLX2Q07687 328 aaPredicted RBP7.45□□□□□ -1.22
HIF1A-209ENST00000556827 NSMFQ6X4W1 530 aa7.45□□□□□ -1.22
HIF1A-209ENST00000556827 TTLL7Q6ZT98 887 aa7.45□□□□□ -1.22
HIF1A-209ENST00000556827 MILR1Q7Z6M3 343 aa7.45□□□□□ -1.22
HIF1A-209ENST00000556827 ZC3H18Q86VM9 953 aaKnown RBP7.45□□□□□ -1.22
HIF1A-209ENST00000556827 RIOX2Q8IUF8 465 aa7.45□□□□□ -1.22
HIF1A-209ENST00000556827 TMEM169Q96HH4 297 aa7.45□□□□□ -1.22
HIF1A-209ENST00000556827 CHAMP1Q96JM3 812 aa7.45□□□□□ -1.22
HIF1A-209ENST00000556827 YIPF4Q9BSR8 244 aa7.45□□□□□ -1.22
HIF1A-209ENST00000556827 BDH2Q9BUT1 245 aa7.45□□□□□ -1.22
HIF1A-209ENST00000556827 CDK13Q14004 1512 aaKnown RBP7.45□□□□□ -1.22
HIF1A-209ENST00000556827 RIMS1Q86UR5 1692 aaKnown RBP7.44□□□□□ -1.22
HIF1A-209ENST00000556827 UHRF1BP1Q6BDS2 1440 aa7.44□□□□□ -1.22
HIF1A-209ENST00000556827 FGFR1P11362 822 aa7.44□□□□□ -1.22
HIF1A-209ENST00000556827 LCP1P13796 627 aa7.44□□□□□ -1.22
HIF1A-209ENST00000556827 LTBRP36941 435 aa7.44□□□□□ -1.22
HIF1A-209ENST00000556827 SARSP49591 514 aaKnown RBP7.44□□□□□ -1.22
HIF1A-209ENST00000556827 SKOR2Q2VWA4 1001 aaPredicted RBP7.44□□□□□ -1.22
HIF1A-209ENST00000556827 UBXN11Q5T124 520 aa7.44□□□□□ -1.22
HIF1A-209ENST00000556827 SLC35F1Q5T1Q4 408 aa7.44□□□□□ -1.22
HIF1A-209ENST00000556827 ACBD5Q5T8D3 534 aaPredicted RBP7.44□□□□□ -1.22
HIF1A-209ENST00000556827 CD300LDQ6UXZ3 194 aa7.44□□□□□ -1.22
HIF1A-209ENST00000556827 NLRP10Q86W26 655 aa7.44□□□□□ -1.22
HIF1A-209ENST00000556827 KCTD13Q8WZ19 329 aa7.44□□□□□ -1.22
HIF1A-209ENST00000556827 EXOC2Q96KP1 924 aa7.44□□□□□ -1.22
HIF1A-209ENST00000556827 CDC6Q99741 560 aa7.44□□□□□ -1.22
HIF1A-209ENST00000556827 GORASP1Q9BQQ3 440 aa7.44□□□□□ -1.22
HIF1A-209ENST00000556827 PCDH18Q9HCL0 1135 aa7.44□□□□□ -1.22
HIF1A-209ENST00000556827 PCDHA2Q9Y5H9 948 aa7.44□□□□□ -1.22
HIF1A-209ENST00000556827 TTC37Q6PGP7 1564 aa7.44□□□□□ -1.22
HIF1A-209ENST00000556827 HECW1Q76N89 1606 aa7.44□□□□□ -1.22
HIF1A-209ENST00000556827 TROQ12816 1431 aaPredicted RBP7.44□□□□□ -1.22
HIF1A-209ENST00000556827 ARHGAP5Q13017 1502 aa7.43□□□□□ -1.22
HIF1A-209ENST00000556827 NTRK3Q16288 839 aa7.43□□□□□ -1.22
HIF1A-209ENST00000556827 USP53Q70EK8 1073 aa7.43□□□□□ -1.22
HIF1A-209ENST00000556827 MIB1Q86YT6 1006 aa7.43□□□□□ -1.22
HIF1A-209ENST00000556827 FAM26EQ8N5C1 309 aa7.43□□□□□ -1.22
HIF1A-209ENST00000556827 RCBTB1Q8NDN9 531 aa7.43□□□□□ -1.22
HIF1A-209ENST00000556827 FBXL7Q9UJT9 491 aa7.43□□□□□ -1.22
HIF1A-209ENST00000556827 PTCH2Q9Y6C5 1203 aa7.43□□□□□ -1.22
HIF1A-209ENST00000556827 X6R8D5 127 aa7.43□□□□□ -1.22
HIF1A-209ENST00000556827 RICTORQ6R327 1708 aa7.42□□□□□ -1.22
HIF1A-209ENST00000556827 PRICKLE3O43900 615 aaPredicted RBP7.42□□□□□ -1.22
HIF1A-209ENST00000556827 PLP2Q04941 152 aa7.42□□□□□ -1.22
HIF1A-209ENST00000556827 MAP4K2Q12851 820 aa7.42□□□□□ -1.22
HIF1A-209ENST00000556827 RTP5Q14D33 572 aa7.42□□□□□ -1.22
HIF1A-209ENST00000556827 PRRT2Q7Z6L0 340 aaPredicted RBP7.42□□□□□ -1.22
HIF1A-209ENST00000556827 FAM126BQ8IXS8 530 aa7.42□□□□□ -1.22
HIF1A-209ENST00000556827 Q8N1Y9 231 aa7.42□□□□□ -1.22
HIF1A-209ENST00000556827 SH3TC2Q8TF17 1288 aa7.42□□□□□ -1.22
HIF1A-209ENST00000556827 THAP3Q8WTV1 239 aaPredicted RBP7.42□□□□□ -1.22
HIF1A-209ENST00000556827 C11orf84Q9BUA3 381 aaPredicted RBP7.42□□□□□ -1.22
HIF1A-209ENST00000556827 SPATA6Q9NWH7 488 aaPredicted RBP7.42□□□□□ -1.22
HIF1A-209ENST00000556827 DISP3Q9P2K9 1392 aa7.42□□□□□ -1.22
HIF1A-209ENST00000556827 TRBV23-1A0A0A0MS06 115 aa7.41□□□□□ -1.22
HIF1A-209ENST00000556827 STAT5AP42229 794 aa7.41□□□□□ -1.22
HIF1A-209ENST00000556827 LSAMPQ13449 338 aa7.41□□□□□ -1.22
HIF1A-209ENST00000556827 SQSTM1Q13501 440 aa7.41□□□□□ -1.22
HIF1A-209ENST00000556827 CHRNA2Q15822 529 aa7.41□□□□□ -1.22
HIF1A-209ENST00000556827 C2orf27AQ580R0 203 aa7.41□□□□□ -1.22
HIF1A-209ENST00000556827 KCNT2Q6UVM3 1135 aa7.41□□□□□ -1.22
HIF1A-209ENST00000556827 JAZF1Q86VZ6 243 aa7.41□□□□□ -1.22
HIF1A-209ENST00000556827 LINC00482Q8N8I6 264 aa7.41□□□□□ -1.22
HIF1A-209ENST00000556827 JMYQ8N9B5 988 aa7.41□□□□□ -1.22
HIF1A-209ENST00000556827 DDX1Q92499 740 aaKnown RBP7.41□□□□□ -1.22
HIF1A-209ENST00000556827 RNPC3Q96LT9 517 aaKnown RBP7.41□□□□□ -1.22
HIF1A-209ENST00000556827 SYT3Q9BQG1 590 aa7.41□□□□□ -1.22
HIF1A-209ENST00000556827 CLDND1Q9NY35 253 aa7.41□□□□□ -1.22
HIF1A-209ENST00000556827 ARHGEF12Q9NZN5 1544 aa7.41□□□□□ -1.22
HIF1A-209ENST00000556827 KIF14Q15058 1648 aa7.41□□□□□ -1.22
HIF1A-209ENST00000556827 H7BY64 318 aa7.4□□□□□ -1.22
HIF1A-209ENST00000556827 NOBOXO60393 691 aa7.4□□□□□ -1.22
HIF1A-209ENST00000556827 THBS2P35442 1172 aa7.4□□□□□ -1.22
HIF1A-209ENST00000556827 TESK1Q15569 626 aa7.4□□□□□ -1.22
HIF1A-209ENST00000556827 GIMAP6Q6P9H5 292 aa7.4□□□□□ -1.22
HIF1A-209ENST00000556827 STK32CQ86UX6 486 aa7.4□□□□□ -1.22
HIF1A-209ENST00000556827 FERMT3Q86UX7 667 aa7.4□□□□□ -1.22
HIF1A-209ENST00000556827 ZNF761Q86XN6 746 aaPredicted RBP7.4□□□□□ -1.22
HIF1A-209ENST00000556827 SCUBE1Q8IWY4 988 aa7.4□□□□□ -1.22
HIF1A-209ENST00000556827 TTLL6Q8N841 843 aa7.4□□□□□ -1.22
HIF1A-209ENST00000556827 KYQ8NBH2 561 aa7.4□□□□□ -1.22
HIF1A-209ENST00000556827 DHRS4Q9BTZ2 278 aa7.4□□□□□ -1.22
HIF1A-209ENST00000556827 MRPS23Q9Y3D9 190 aaKnown RBP7.4□□□□□ -1.22
HIF1A-209ENST00000556827 MRPL42Q9Y6G3 142 aaKnown RBP7.4□□□□□ -1.22
HIF1A-209ENST00000556827 ARHGAP35Q9NRY4 1499 aa7.4□□□□□ -1.22
HIF1A-209ENST00000556827 CCDC18Q5T9S5 1454 aa7.39□□□□□ -1.23
HIF1A-209ENST00000556827 CNTLNQ9NXG0 1405 aa7.39□□□□□ -1.23
HIF1A-209ENST00000556827 TRAPPC8Q9Y2L5 1435 aa7.39□□□□□ -1.23
HIF1A-209ENST00000556827 SPAG9O60271 1321 aaKnown RBP7.39□□□□□ -1.23
HIF1A-209ENST00000556827 HGSO14964 777 aaPredicted RBP7.39□□□□□ -1.23
HIF1A-209ENST00000556827 MSCO60682 206 aa7.39□□□□□ -1.23
HIF1A-209ENST00000556827 DGKIO75912 1065 aa7.39□□□□□ -1.23
HIF1A-209ENST00000556827 CNR2P34972 360 aa7.39□□□□□ -1.23
HIF1A-209ENST00000556827 NKX3-2P78367 333 aa7.39□□□□□ -1.23
HIF1A-209ENST00000556827 ZFYVE27Q5T4F4 411 aa7.39□□□□□ -1.23
HIF1A-209ENST00000556827 STEAP3Q658P3 488 aa7.39□□□□□ -1.23
HIF1A-209ENST00000556827 ADAMTS17Q8TE56 1095 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms