RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 EDIL3O43854 480 aa11.79□□□□□ -0.52
SHMT2-224ENST00000556737 NBNO60934 754 aa11.79□□□□□ -0.52
SHMT2-224ENST00000556737 FAM86B2P0C5J1 330 aa11.79□□□□□ -0.52
SHMT2-224ENST00000556737 ARP10275 920 aa11.79□□□□□ -0.52
SHMT2-224ENST00000556737 ANAPC15P60006 121 aa11.79□□□□□ -0.52
SHMT2-224ENST00000556737 ADAM17P78536 824 aa11.79□□□□□ -0.52
SHMT2-224ENST00000556737 CEP55Q53EZ4 464 aa11.79□□□□□ -0.52
SHMT2-224ENST00000556737 ZNF618Q5T7W0 954 aa11.79□□□□□ -0.52
SHMT2-224ENST00000556737 UTP14CQ5TAP6 766 aaKnown RBP11.79□□□□□ -0.52
SHMT2-224ENST00000556737 NIPA1Q7RTP0 329 aa11.79□□□□□ -0.52
SHMT2-224ENST00000556737 REXO1Q8N1G1 1221 aaKnown RBP11.79□□□□□ -0.52
SHMT2-224ENST00000556737 RETREG2Q8NC44 543 aa11.79□□□□□ -0.52
SHMT2-224ENST00000556737 RASGRP4Q8TDF6 673 aa11.79□□□□□ -0.52
SHMT2-224ENST00000556737 CCDC12Q8WUD4 166 aaPredicted RBP11.79□□□□□ -0.52
SHMT2-224ENST00000556737 LMBR1Q8WVP7 490 aa11.79□□□□□ -0.52
SHMT2-224ENST00000556737 TIFAQ96CG3 184 aa11.79□□□□□ -0.52
SHMT2-224ENST00000556737 PCYT2Q99447 389 aa11.79□□□□□ -0.52
SHMT2-224ENST00000556737 CDX2Q99626 313 aaPredicted RBP11.79□□□□□ -0.52
SHMT2-224ENST00000556737 MTIF3Q9H2K0 278 aaKnown RBP11.79□□□□□ -0.52
SHMT2-224ENST00000556737 RNPEPQ9H4A4 650 aa11.79□□□□□ -0.52
SHMT2-224ENST00000556737 AGO4Q9HCK5 861 aaKnown RBP11.79□□□□□ -0.52
SHMT2-224ENST00000556737 JPH1Q9HDC5 661 aaPredicted RBP11.79□□□□□ -0.52
SHMT2-224ENST00000556737 PDRG1Q9NUG6 133 aa11.79□□□□□ -0.52
SHMT2-224ENST00000556737 VPS54Q9P1Q0 977 aa11.79□□□□□ -0.52
SHMT2-224ENST00000556737 ZNF215Q9UL58 517 aaPredicted RBP11.79□□□□□ -0.52
SHMT2-224ENST00000556737 YBX2Q9Y2T7 364 aaKnown RBP11.79□□□□□ -0.52
SHMT2-224ENST00000556737 NFASCO94856 1347 aa11.79□□□□□ -0.52
SHMT2-224ENST00000556737 MICAL3Q7RTP6 2002 aa11.79□□□□□ -0.52
SHMT2-224ENST00000556737 COL4A4P53420 1690 aaPredicted RBP11.78□□□□□ -0.52
SHMT2-224ENST00000556737 ZBBXA8MT70 800 aa11.78□□□□□ -0.52
SHMT2-224ENST00000556737 TREHO43280 583 aa11.78□□□□□ -0.52
SHMT2-224ENST00000556737 LGR5O75473 907 aa11.78□□□□□ -0.52
SHMT2-224ENST00000556737 SEC24BO95487 1268 aa11.78□□□□□ -0.52
SHMT2-224ENST00000556737 CYP3A4P08684 503 aa11.78□□□□□ -0.52
SHMT2-224ENST00000556737 STK3Q13188 491 aa11.78□□□□□ -0.52
SHMT2-224ENST00000556737 NPY5RQ15761 445 aa11.78□□□□□ -0.52
SHMT2-224ENST00000556737 C8orf34Q49A92 452 aa11.78□□□□□ -0.52
SHMT2-224ENST00000556737 CCDC148Q8NFR7 591 aa11.78□□□□□ -0.52
SHMT2-224ENST00000556737 MYLIPQ8WY64 445 aa11.78□□□□□ -0.52
SHMT2-224ENST00000556737 C6orf50Q9HD87 102 aa11.78□□□□□ -0.52
SHMT2-224ENST00000556737 SETD4Q9NVD3 440 aa11.78□□□□□ -0.52
SHMT2-224ENST00000556737 SLC9A2Q9UBY0 812 aa11.78□□□□□ -0.52
SHMT2-224ENST00000556737 UNC80Q8N2C7 3258 aa11.78□□□□□ -0.52
SHMT2-224ENST00000556737 CCNE2O96020 404 aa11.77□□□□□ -0.53
SHMT2-224ENST00000556737 ATP2A2P16615 1042 aaKnown RBP11.77□□□□□ -0.53
SHMT2-224ENST00000556737 MARK3P27448 753 aa11.77□□□□□ -0.53
SHMT2-224ENST00000556737 GNA11P29992 359 aa11.77□□□□□ -0.53
SHMT2-224ENST00000556737 RABGGTBP53611 331 aa11.77□□□□□ -0.53
SHMT2-224ENST00000556737 ACTR2P61160 394 aa11.77□□□□□ -0.53
SHMT2-224ENST00000556737 SCRN1Q12765 414 aa11.77□□□□□ -0.53
SHMT2-224ENST00000556737 MKRN4PQ13434 485 aaPredicted RBP11.77□□□□□ -0.53
SHMT2-224ENST00000556737 GRIN2CQ14957 1233 aa11.77□□□□□ -0.53
SHMT2-224ENST00000556737 RAB30Q15771 203 aa11.77□□□□□ -0.53
SHMT2-224ENST00000556737 MCTP2Q6DN12 878 aa11.77□□□□□ -0.53
SHMT2-224ENST00000556737 SEPT1Q8WYJ6 367 aa11.77□□□□□ -0.53
SHMT2-224ENST00000556737 ATP6V0A1Q93050 837 aa11.77□□□□□ -0.53
SHMT2-224ENST00000556737 LENG9Q96B70 501 aa11.77□□□□□ -0.53
SHMT2-224ENST00000556737 AIFM3Q96NN9 605 aa11.77□□□□□ -0.53
SHMT2-224ENST00000556737 BACH2Q9BYV9 841 aa11.77□□□□□ -0.53
SHMT2-224ENST00000556737 OSBPL7Q9BZF2 842 aa11.77□□□□□ -0.53
SHMT2-224ENST00000556737 ZNF576Q9H609 170 aa11.77□□□□□ -0.53
SHMT2-224ENST00000556737 UPF2Q9HAU5 1272 aaKnown RBP11.77□□□□□ -0.53
SHMT2-224ENST00000556737 SH3GLB2Q9NR46 395 aa11.77□□□□□ -0.53
SHMT2-224ENST00000556737 TPCN1Q9ULQ1 816 aa11.77□□□□□ -0.53
SHMT2-224ENST00000556737 SLC4A7Q9Y6M7 1214 aa11.77□□□□□ -0.53
SHMT2-224ENST00000556737 SPTBN5Q9NRC6 3674 aaKnown RBP11.76□□□□□ -0.53
SHMT2-224ENST00000556737 MBLAC1A4D2B0 266 aaPredicted RBP11.76□□□□□ -0.53
SHMT2-224ENST00000556737 M0R2N6 131 aa11.76□□□□□ -0.53
SHMT2-224ENST00000556737 DHX15O43143 795 aaKnown RBP11.76□□□□□ -0.53
SHMT2-224ENST00000556737 CAND2O75155 1236 aa11.76□□□□□ -0.53
SHMT2-224ENST00000556737 BAIAP3O94812 1187 aa11.76□□□□□ -0.53
SHMT2-224ENST00000556737 ATG7O95352 703 aa11.76□□□□□ -0.53
SHMT2-224ENST00000556737 DEXIO95424 95 aa11.76□□□□□ -0.53
SHMT2-224ENST00000556737 PARNO95453 639 aaKnown RBP11.76□□□□□ -0.53
SHMT2-224ENST00000556737 LARGE1O95461 756 aa11.76□□□□□ -0.53
SHMT2-224ENST00000556737 ACTN1P12814 892 aa11.76□□□□□ -0.53
SHMT2-224ENST00000556737 MYOGP15173 224 aa11.76□□□□□ -0.53
SHMT2-224ENST00000556737 CIITAP33076 1130 aa11.76□□□□□ -0.53
SHMT2-224ENST00000556737 AK2P54819 239 aa11.76□□□□□ -0.53
SHMT2-224ENST00000556737 WDR5P61964 334 aaKnown RBP11.76□□□□□ -0.53
SHMT2-224ENST00000556737 AKAP17AQ02040 695 aaKnown RBP11.76□□□□□ -0.53
SHMT2-224ENST00000556737 MARCH8Q5T0T0 291 aa11.76□□□□□ -0.53
SHMT2-224ENST00000556737 CNKSR3Q6P9H4 555 aa11.76□□□□□ -0.53
SHMT2-224ENST00000556737 RUFY4Q6ZNE9 571 aa11.76□□□□□ -0.53
SHMT2-224ENST00000556737 PLA2G4DQ86XP0 818 aa11.76□□□□□ -0.53
SHMT2-224ENST00000556737 DAGLBQ8NCG7 672 aa11.76□□□□□ -0.53
SHMT2-224ENST00000556737 SLC9A7Q96T83 725 aa11.76□□□□□ -0.53
SHMT2-224ENST00000556737 SDF4Q9BRK5 362 aa11.76□□□□□ -0.53
SHMT2-224ENST00000556737 FTOQ9C0B1 505 aaKnown RBP eCLIP11.76□□□□□ -0.53
SHMT2-224ENST00000556737 NKX2-4Q9H2Z4 354 aa11.76□□□□□ -0.53
SHMT2-224ENST00000556737 ERAP1Q9NZ08 941 aa11.76□□□□□ -0.53
SHMT2-224ENST00000556737 NRCAMQ92823 1304 aa11.76□□□□□ -0.53
SHMT2-224ENST00000556737 STK36Q9NRP7 1315 aa11.76□□□□□ -0.53
SHMT2-224ENST00000556737 WDR81Q562E7 1941 aa11.76□□□□□ -0.53
SHMT2-224ENST00000556737 PRUNE2Q8WUY3 3088 aa11.75□□□□□ -0.53
SHMT2-224ENST00000556737 COL4A6Q14031 1691 aa11.75□□□□□ -0.53
SHMT2-224ENST00000556737 TRANK1O15050 2925 aa11.75□□□□□ -0.53
SHMT2-224ENST00000556737 IGKV6D-21A0A0A0MT36 114 aa11.75□□□□□ -0.53
SHMT2-224ENST00000556737 PFKFB2O60825 505 aa11.75□□□□□ -0.53
SHMT2-224ENST00000556737 DTNBO60941 627 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms