RNA–Protein interactions for RNA: ENST00000556342.1

SYNE2-221, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5

Gene SYNE2, Length 572 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-221ENST00000556342 KCNA5P22460 613 aa12.47□□□□□ -0.41
SYNE2-221ENST00000556342 GHRHRQ02643 423 aa12.47□□□□□ -0.41
SYNE2-221ENST00000556342 KCNC4Q03721 635 aa12.47□□□□□ -0.41
SYNE2-221ENST00000556342 GJD3Q8N144 294 aa12.47□□□□□ -0.41
SYNE2-221ENST00000556342 ENAHQ8N8S7 591 aaPredicted RBP12.47□□□□□ -0.41
SYNE2-221ENST00000556342 DBF4BQ8NFT6 615 aa12.47□□□□□ -0.41
SYNE2-221ENST00000556342 RILPL2Q969X0 211 aa12.47□□□□□ -0.41
SYNE2-221ENST00000556342 SPATA33Q96N06 139 aa12.47□□□□□ -0.41
SYNE2-221ENST00000556342 ZSCAN10Q96SZ4 725 aaPredicted RBP12.47□□□□□ -0.41
SYNE2-221ENST00000556342 C17orf80Q9BSJ5 609 aa12.47□□□□□ -0.41
SYNE2-221ENST00000556342 VAT1LQ9HCJ6 419 aa12.47□□□□□ -0.41
SYNE2-221ENST00000556342 INSL6Q9Y581 213 aa12.47□□□□□ -0.41
SYNE2-221ENST00000556342 MUC6Q6W4X9 2439 aa12.47□□□□□ -0.41
SYNE2-221ENST00000556342 RSPH10B2B2RC85 870 aa12.46□□□□□ -0.41
SYNE2-221ENST00000556342 B4E1Z4 1266 aa12.46□□□□□ -0.41
SYNE2-221ENST00000556342 RGS20O76081 388 aa12.46□□□□□ -0.41
SYNE2-221ENST00000556342 AMHP03971 560 aa12.46□□□□□ -0.41
SYNE2-221ENST00000556342 RSPH10BP0C881 870 aa12.46□□□□□ -0.41
SYNE2-221ENST00000556342 SDSP20132 328 aa12.46□□□□□ -0.41
SYNE2-221ENST00000556342 HSD17B4P51659 736 aa12.46□□□□□ -0.41
SYNE2-221ENST00000556342 HTRA4P83105 476 aaPredicted RBP12.46□□□□□ -0.41
SYNE2-221ENST00000556342 HDAC1Q13547 482 aaPredicted RBP12.46□□□□□ -0.41
SYNE2-221ENST00000556342 HSDL1Q3SXM5 330 aa12.46□□□□□ -0.41
SYNE2-221ENST00000556342 CELF3Q5SZQ8 465 aaKnown RBP12.46□□□□□ -0.41
SYNE2-221ENST00000556342 MYSM1Q5VVJ2 828 aa12.46□□□□□ -0.41
SYNE2-221ENST00000556342 SERINC5Q86VE9 423 aa12.46□□□□□ -0.41
SYNE2-221ENST00000556342 FAM178BQ8IXR5 827 aa12.46□□□□□ -0.41
SYNE2-221ENST00000556342 MYOCDQ8IZQ8 938 aa12.46□□□□□ -0.41
SYNE2-221ENST00000556342 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.46□□□□□ -0.41
SYNE2-221ENST00000556342 PDCD2LQ9BRP1 358 aa12.46□□□□□ -0.41
SYNE2-221ENST00000556342 AMNQ9BXJ7 453 aa12.46□□□□□ -0.41
SYNE2-221ENST00000556342 SORBS3O60504 671 aa12.45□□□□□ -0.42
SYNE2-221ENST00000556342 GGPS1O95749 300 aa12.45□□□□□ -0.42
SYNE2-221ENST00000556342 MYCLP12524 364 aaPredicted RBP12.45□□□□□ -0.42
SYNE2-221ENST00000556342 IL9P15248 144 aa12.45□□□□□ -0.42
SYNE2-221ENST00000556342 UBA1P22314 1058 aaKnown RBP12.45□□□□□ -0.42
SYNE2-221ENST00000556342 THPOP40225 353 aa12.45□□□□□ -0.42
SYNE2-221ENST00000556342 PLEKHG4Q58EX7 1191 aa12.45□□□□□ -0.42
SYNE2-221ENST00000556342 KCNV1Q6PIU1 500 aa12.45□□□□□ -0.42
SYNE2-221ENST00000556342 STOX1Q6ZVD7 989 aa12.45□□□□□ -0.42
SYNE2-221ENST00000556342 MRPL38Q96DV4 380 aaKnown RBP12.45□□□□□ -0.42
SYNE2-221ENST00000556342 C16orf70Q9BSU1 422 aa12.45□□□□□ -0.42
SYNE2-221ENST00000556342 PRR14Q9BWN1 585 aa12.45□□□□□ -0.42
SYNE2-221ENST00000556342 LNPKQ9C0E8 428 aa12.45□□□□□ -0.42
SYNE2-221ENST00000556342 MAP3K20Q9NYL2 800 aaKnown RBP12.45□□□□□ -0.42
SYNE2-221ENST00000556342 ZSWIM5Q9P217 1185 aa12.45□□□□□ -0.42
SYNE2-221ENST00000556342 KIAA1217Q5T5P2 1943 aa12.45□□□□□ -0.42
SYNE2-221ENST00000556342 SIP14410 1827 aa12.44□□□□□ -0.42
SYNE2-221ENST00000556342 C17orf102A2RUQ5 167 aa12.44□□□□□ -0.42
SYNE2-221ENST00000556342 PRR33A8MZF0 331 aa12.44□□□□□ -0.42
SYNE2-221ENST00000556342 PPP1R11O60927 126 aaPredicted RBP12.44□□□□□ -0.42
SYNE2-221ENST00000556342 HOXA13P31271 388 aaPredicted RBP12.44□□□□□ -0.42
SYNE2-221ENST00000556342 HOXC8P31273 242 aa12.44□□□□□ -0.42
SYNE2-221ENST00000556342 RRP1P56182 461 aaKnown RBP12.44□□□□□ -0.42
SYNE2-221ENST00000556342 SP2Q02086 613 aa12.44□□□□□ -0.42
SYNE2-221ENST00000556342 PGM5Q15124 567 aa12.44□□□□□ -0.42
SYNE2-221ENST00000556342 PTPROQ16827 1216 aa12.44□□□□□ -0.42
SYNE2-221ENST00000556342 EPC2Q52LR7 807 aa12.44□□□□□ -0.42
SYNE2-221ENST00000556342 TIGD5Q53EQ6 642 aa12.44□□□□□ -0.42
SYNE2-221ENST00000556342 PTCRAQ6ISU1 281 aaPredicted RBP12.44□□□□□ -0.42
SYNE2-221ENST00000556342 VSIG10LQ86VR7 867 aa12.44□□□□□ -0.42
SYNE2-221ENST00000556342 STAG2Q8N3U4 1231 aa12.44□□□□□ -0.42
SYNE2-221ENST00000556342 IL31RAQ8NI17 732 aa12.44□□□□□ -0.42
SYNE2-221ENST00000556342 MTMR8Q96EF0 704 aa12.44□□□□□ -0.42
SYNE2-221ENST00000556342 SAMD11Q96NU1 681 aa12.44□□□□□ -0.42
SYNE2-221ENST00000556342 CTNNA3Q9UI47 895 aa12.44□□□□□ -0.42
SYNE2-221ENST00000556342 KLRF2D3W0D1 207 aa12.43□□□□□ -0.42
SYNE2-221ENST00000556342 ZBTB5O15062 677 aa12.43□□□□□ -0.42
SYNE2-221ENST00000556342 TGFB3P10600 412 aa12.43□□□□□ -0.42
SYNE2-221ENST00000556342 SSTR3P32745 418 aaPredicted RBP12.43□□□□□ -0.42
SYNE2-221ENST00000556342 IMMTQ16891 758 aaKnown RBP12.43□□□□□ -0.42
SYNE2-221ENST00000556342 PUS10Q3MIT2 529 aaKnown RBP12.43□□□□□ -0.42
SYNE2-221ENST00000556342 IFIT1BQ5T764 474 aaKnown RBP12.43□□□□□ -0.42
SYNE2-221ENST00000556342 CWC27Q6UX04 472 aaKnown RBP12.43□□□□□ -0.42
SYNE2-221ENST00000556342 SAMD3Q8N6K7 520 aa12.43□□□□□ -0.42
SYNE2-221ENST00000556342 NEK9Q8TD19 979 aa12.43□□□□□ -0.42
SYNE2-221ENST00000556342 SEPT8Q92599 483 aa12.43□□□□□ -0.42
SYNE2-221ENST00000556342 ATP6V0A1Q93050 837 aa12.43□□□□□ -0.42
SYNE2-221ENST00000556342 YME1L1Q96TA2 773 aa12.43□□□□□ -0.42
SYNE2-221ENST00000556342 UBAC1Q9BSL1 405 aa12.43□□□□□ -0.42
SYNE2-221ENST00000556342 DSCC1Q9BVC3 393 aa12.43□□□□□ -0.42
SYNE2-221ENST00000556342 KRT23Q9C075 422 aa12.43□□□□□ -0.42
SYNE2-221ENST00000556342 MLXIPQ9HAP2 919 aa12.43□□□□□ -0.42
SYNE2-221ENST00000556342 DIAPH3Q9NSV4 1193 aa12.43□□□□□ -0.42
SYNE2-221ENST00000556342 PCDHA1Q9Y5I3 950 aa12.43□□□□□ -0.42
SYNE2-221ENST00000556342 H3BNC9 293 aa12.42□□□□□ -0.42
SYNE2-221ENST00000556342 H3BQ06 376 aaPredicted RBP12.42□□□□□ -0.42
SYNE2-221ENST00000556342 H3BRB1 525 aa12.42□□□□□ -0.42
SYNE2-221ENST00000556342 TREHO43280 583 aa12.42□□□□□ -0.42
SYNE2-221ENST00000556342 CAND2O75155 1236 aa12.42□□□□□ -0.42
SYNE2-221ENST00000556342 LGALS2P05162 132 aa12.42□□□□□ -0.42
SYNE2-221ENST00000556342 SMIM10L2AP0DMW4 78 aa12.42□□□□□ -0.42
SYNE2-221ENST00000556342 SMIM10L2BP0DMW5 78 aa12.42□□□□□ -0.42
SYNE2-221ENST00000556342 ALADP13716 330 aa12.42□□□□□ -0.42
SYNE2-221ENST00000556342 CCND2P30279 289 aa12.42□□□□□ -0.42
SYNE2-221ENST00000556342 GPM6BQ13491 265 aa12.42□□□□□ -0.42
SYNE2-221ENST00000556342 BANK1Q8NDB2 785 aa12.42□□□□□ -0.42
SYNE2-221ENST00000556342 GPKOWQ92917 476 aaPredicted RBP eCLIP12.42□□□□□ -0.42
SYNE2-221ENST00000556342 TOP1MTQ969P6 601 aa12.42□□□□□ -0.42
SYNE2-221ENST00000556342 MTRQ99707 1265 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms