RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 CYP3A4P08684 503 aa13.15□□□□□ -0.3
SLIRP-205ENST00000556310 CYP2C18P33260 490 aa13.15□□□□□ -0.3
SLIRP-205ENST00000556310 CHMP4BP1P59074 171 aa13.15□□□□□ -0.3
SLIRP-205ENST00000556310 NIPA1Q7RTP0 329 aa13.15□□□□□ -0.3
SLIRP-205ENST00000556310 TMEM199Q8N511 208 aa13.15□□□□□ -0.3
SLIRP-205ENST00000556310 C7orf31Q8N865 590 aa13.15□□□□□ -0.3
SLIRP-205ENST00000556310 TMC2Q8TDI7 906 aa13.15□□□□□ -0.3
SLIRP-205ENST00000556310 PPP1R13LQ8WUF5 828 aa13.15□□□□□ -0.3
SLIRP-205ENST00000556310 GTF3C6Q969F1 213 aa13.15□□□□□ -0.3
SLIRP-205ENST00000556310 DDX27Q96GQ7 796 aaKnown RBP13.15□□□□□ -0.3
SLIRP-205ENST00000556310 C16orf70Q9BSU1 422 aa13.15□□□□□ -0.3
SLIRP-205ENST00000556310 KCNH7Q9NS40 1196 aa13.15□□□□□ -0.3
SLIRP-205ENST00000556310 GTF2IRD1Q9UHL9 959 aa13.15□□□□□ -0.3
SLIRP-205ENST00000556310 NOD1Q9Y239 953 aa13.15□□□□□ -0.3
SLIRP-205ENST00000556310 SCN5AQ14524 2016 aa13.15□□□□□ -0.3
SLIRP-205ENST00000556310 NFASCO94856 1347 aa13.14□□□□□ -0.31
SLIRP-205ENST00000556310 UMODL1Q5DID0 1318 aa13.14□□□□□ -0.31
SLIRP-205ENST00000556310 KAT6AQ92794 2004 aa13.14□□□□□ -0.31
SLIRP-205ENST00000556310 MEIS1O00470 390 aa13.14□□□□□ -0.31
SLIRP-205ENST00000556310 LARGE1O95461 756 aa13.14□□□□□ -0.31
SLIRP-205ENST00000556310 CYP2C9P11712 490 aa13.14□□□□□ -0.31
SLIRP-205ENST00000556310 ZNF76P36508 570 aa13.14□□□□□ -0.31
SLIRP-205ENST00000556310 EPHB4P54760 987 aa13.14□□□□□ -0.31
SLIRP-205ENST00000556310 NLRP5P59047 1200 aa13.14□□□□□ -0.31
SLIRP-205ENST00000556310 SP4Q02446 784 aa13.14□□□□□ -0.31
SLIRP-205ENST00000556310 ME3Q16798 604 aa13.14□□□□□ -0.31
SLIRP-205ENST00000556310 C9orf50Q5SZB4 431 aa13.14□□□□□ -0.31
SLIRP-205ENST00000556310 GALNT17Q6IS24 598 aa13.14□□□□□ -0.31
SLIRP-205ENST00000556310 GDF6Q6KF10 455 aaPredicted RBP13.14□□□□□ -0.31
SLIRP-205ENST00000556310 DAGLBQ8NCG7 672 aa13.14□□□□□ -0.31
SLIRP-205ENST00000556310 CYP2W1Q8TAV3 490 aa13.14□□□□□ -0.31
SLIRP-205ENST00000556310 RASGRP4Q8TDF6 673 aa13.14□□□□□ -0.31
SLIRP-205ENST00000556310 ALG1Q9BT22 464 aa13.14□□□□□ -0.31
SLIRP-205ENST00000556310 WNT8AQ9H1J5 351 aa13.14□□□□□ -0.31
SLIRP-205ENST00000556310 JPH1Q9HDC5 661 aaPredicted RBP13.14□□□□□ -0.31
SLIRP-205ENST00000556310 PKD2L1Q9P0L9 805 aa13.14□□□□□ -0.31
SLIRP-205ENST00000556310 HDAC6Q9UBN7 1215 aa13.14□□□□□ -0.31
SLIRP-205ENST00000556310 ZNF215Q9UL58 517 aaPredicted RBP13.14□□□□□ -0.31
SLIRP-205ENST00000556310 PCDHA4Q9UN74 947 aa13.14□□□□□ -0.31
SLIRP-205ENST00000556310 IGLV3-22A0A075B6J6 115 aa13.13□□□□□ -0.31
SLIRP-205ENST00000556310 FAM86B1E9PN63 330 aa13.13□□□□□ -0.31
SLIRP-205ENST00000556310 H3BRB1 525 aa13.13□□□□□ -0.31
SLIRP-205ENST00000556310 SOX1O00570 391 aaPredicted RBP13.13□□□□□ -0.31
SLIRP-205ENST00000556310 CTDNEP1O95476 244 aa13.13□□□□□ -0.31
SLIRP-205ENST00000556310 FAM86B2P0C5J1 330 aa13.13□□□□□ -0.31
SLIRP-205ENST00000556310 ARP10275 920 aa13.13□□□□□ -0.31
SLIRP-205ENST00000556310 CSF2RAP15509 400 aa13.13□□□□□ -0.31
SLIRP-205ENST00000556310 RBM25P49756 843 aaKnown RBP13.13□□□□□ -0.31
SLIRP-205ENST00000556310 SETQ01105 290 aaPredicted RBP13.13□□□□□ -0.31
SLIRP-205ENST00000556310 SHHQ15465 462 aa13.13□□□□□ -0.31
SLIRP-205ENST00000556310 PTGISQ16647 500 aa13.13□□□□□ -0.31
SLIRP-205ENST00000556310 PSRC1Q6PGN9 363 aaPredicted RBP13.13□□□□□ -0.31
SLIRP-205ENST00000556310 TRIM50Q86XT4 487 aa13.13□□□□□ -0.31
SLIRP-205ENST00000556310 CCDC155Q8N6L0 562 aa13.13□□□□□ -0.31
SLIRP-205ENST00000556310 CAGE1Q8TC20 777 aa13.13□□□□□ -0.31
SLIRP-205ENST00000556310 AIFM3Q96NN9 605 aa13.13□□□□□ -0.31
SLIRP-205ENST00000556310 CTAGE1Q96RT6 745 aa13.13□□□□□ -0.31
SLIRP-205ENST00000556310 SDF4Q9BRK5 362 aa13.13□□□□□ -0.31
SLIRP-205ENST00000556310 C22orf23Q9BZE7 217 aa13.13□□□□□ -0.31
SLIRP-205ENST00000556310 TUT1Q9H6E5 874 aaKnown RBP13.13□□□□□ -0.31
SLIRP-205ENST00000556310 AGO4Q9HCK5 861 aaKnown RBP13.13□□□□□ -0.31
SLIRP-205ENST00000556310 TELO2Q9Y4R8 837 aa13.13□□□□□ -0.31
SLIRP-205ENST00000556310 SLC34A2O95436 690 aa13.12□□□□□ -0.31
SLIRP-205ENST00000556310 XBP1P17861 261 aa13.12□□□□□ -0.31
SLIRP-205ENST00000556310 HOXC8P31273 242 aa13.12□□□□□ -0.31
SLIRP-205ENST00000556310 TCF7P36402 384 aaPredicted RBP13.12□□□□□ -0.31
SLIRP-205ENST00000556310 CCL23P55773 120 aa13.12□□□□□ -0.31
SLIRP-205ENST00000556310 RBL2Q08999 1139 aa13.12□□□□□ -0.31
SLIRP-205ENST00000556310 ITGB3BPQ13352 177 aaPredicted RBP13.12□□□□□ -0.31
SLIRP-205ENST00000556310 BFSP2Q13515 415 aa13.12□□□□□ -0.31
SLIRP-205ENST00000556310 NBR1Q14596 966 aa13.12□□□□□ -0.31
SLIRP-205ENST00000556310 NPY5RQ15761 445 aa13.12□□□□□ -0.31
SLIRP-205ENST00000556310 UTP14CQ5TAP6 766 aaKnown RBP13.12□□□□□ -0.31
SLIRP-205ENST00000556310 PLA2G4DQ86XP0 818 aa13.12□□□□□ -0.31
SLIRP-205ENST00000556310 BLIDQ8IZY5 108 aa13.12□□□□□ -0.31
SLIRP-205ENST00000556310 NECAB1Q8N987 351 aa13.12□□□□□ -0.31
SLIRP-205ENST00000556310 SEPT1Q8WYJ6 367 aa13.12□□□□□ -0.31
SLIRP-205ENST00000556310 WASF1Q92558 559 aa13.12□□□□□ -0.31
SLIRP-205ENST00000556310 RNPC3Q96LT9 517 aaKnown RBP13.12□□□□□ -0.31
SLIRP-205ENST00000556310 KIF2CQ99661 725 aa13.12□□□□□ -0.31
SLIRP-205ENST00000556310 IL23AQ9NPF7 189 aa13.12□□□□□ -0.31
SLIRP-205ENST00000556310 ORC3Q9UBD5 711 aaPredicted RBP13.12□□□□□ -0.31
SLIRP-205ENST00000556310 SLC9A2Q9UBY0 812 aa13.12□□□□□ -0.31
SLIRP-205ENST00000556310 EMSYQ7Z589 1322 aa13.12□□□□□ -0.31
SLIRP-205ENST00000556310 WDR81Q562E7 1941 aa13.11□□□□□ -0.31
SLIRP-205ENST00000556310 GSTTP1A0A1W2PQM5 241 aa13.11□□□□□ -0.31
SLIRP-205ENST00000556310 M0R2N6 131 aa13.11□□□□□ -0.31
SLIRP-205ENST00000556310 SMIM10L2AP0DMW4 78 aa13.11□□□□□ -0.31
SLIRP-205ENST00000556310 SMIM10L2BP0DMW5 78 aa13.11□□□□□ -0.31
SLIRP-205ENST00000556310 CIITAP33076 1130 aa13.11□□□□□ -0.31
SLIRP-205ENST00000556310 PTK7Q13308 1070 aa13.11□□□□□ -0.31
SLIRP-205ENST00000556310 NSUN7Q8NE18 718 aaKnown RBP13.11□□□□□ -0.31
SLIRP-205ENST00000556310 KCNV2Q8TDN2 545 aa13.11□□□□□ -0.31
SLIRP-205ENST00000556310 AFAP1L1Q8TED9 768 aa13.11□□□□□ -0.31
SLIRP-205ENST00000556310 DHX38Q92620 1227 aaKnown RBP13.11□□□□□ -0.31
SLIRP-205ENST00000556310 LRCH3Q96II8 777 aa13.11□□□□□ -0.31
SLIRP-205ENST00000556310 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.11□□□□□ -0.316e-7■■■□□ 18.5
SLIRP-205ENST00000556310 PHF20Q9BVI0 1012 aa13.11□□□□□ -0.31
SLIRP-205ENST00000556310 UPF2Q9HAU5 1272 aaKnown RBP13.11□□□□□ -0.31
SLIRP-205ENST00000556310 LIMCH1Q9UPQ0 1083 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms