RNA–Protein interactions for RNA: ENST00000555858.1

MTHFD1-212, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 5

Gene MTHFD1, Length 386 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-212ENST00000555858 SLC39A13Q96H72 371 aa3.88□□□□□ -1.79
MTHFD1-212ENST00000555858 MAP6Q96JE9 813 aa3.88□□□□□ -1.79
MTHFD1-212ENST00000555858 AIFM3Q96NN9 605 aa3.88□□□□□ -1.79
MTHFD1-212ENST00000555858 ACAP3Q96P50 834 aa3.88□□□□□ -1.79
MTHFD1-212ENST00000555858 MPHOSPH6Q99547 160 aaKnown RBP3.88□□□□□ -1.79
MTHFD1-212ENST00000555858 ATP13A1Q9HD20 1204 aa3.88□□□□□ -1.79
MTHFD1-212ENST00000555858 SLC6A20Q9NP91 592 aa3.88□□□□□ -1.79
MTHFD1-212ENST00000555858 ZBTB21Q9ULJ3 1066 aa3.88□□□□□ -1.79
MTHFD1-212ENST00000555858 SRPK3Q9UPE1 567 aa3.88□□□□□ -1.79
MTHFD1-212ENST00000555858 NUB1Q9Y5A7 615 aa3.88□□□□□ -1.79
MTHFD1-212ENST00000555858 B3GALT1Q9Y5Z6 326 aa3.88□□□□□ -1.79
MTHFD1-212ENST00000555858 A0A1W2PQ45 241 aaPredicted RBP3.87□□□□□ -1.79
MTHFD1-212ENST00000555858 A0A1W2PQY0 241 aa3.87□□□□□ -1.79
MTHFD1-212ENST00000555858 FADS2P1A8MWK0 482 aa3.87□□□□□ -1.79
MTHFD1-212ENST00000555858 C1QTNF9BB2RNN3 333 aa3.87□□□□□ -1.79
MTHFD1-212ENST00000555858 KRIT1O00522 736 aa3.87□□□□□ -1.79
MTHFD1-212ENST00000555858 SCDO00767 359 aa3.87□□□□□ -1.79
MTHFD1-212ENST00000555858 KCNK3O14649 394 aa3.87□□□□□ -1.79
MTHFD1-212ENST00000555858 CYP26A1O43174 497 aa3.87□□□□□ -1.79
MTHFD1-212ENST00000555858 PCDHGA12O60330 932 aa3.87□□□□□ -1.79
MTHFD1-212ENST00000555858 MAFKO60675 156 aa3.87□□□□□ -1.79
MTHFD1-212ENST00000555858 PPP1R11O60927 126 aaPredicted RBP3.87□□□□□ -1.79
MTHFD1-212ENST00000555858 H2AFYO75367 372 aaKnown RBP3.87□□□□□ -1.79
MTHFD1-212ENST00000555858 IL33O95760 270 aa3.87□□□□□ -1.79
MTHFD1-212ENST00000555858 IGLV1-40P01703 118 aa3.87□□□□□ -1.79
MTHFD1-212ENST00000555858 FUCA1P04066 466 aa3.87□□□□□ -1.79
MTHFD1-212ENST00000555858 TRIM27P14373 513 aa3.87□□□□□ -1.79
MTHFD1-212ENST00000555858 LPOP22079 712 aaPredicted RBP3.87□□□□□ -1.79
MTHFD1-212ENST00000555858 CD40P25942 277 aa3.87□□□□□ -1.79
MTHFD1-212ENST00000555858 GATA4P43694 442 aa3.87□□□□□ -1.79
MTHFD1-212ENST00000555858 GPR3P46089 330 aa3.87□□□□□ -1.79
MTHFD1-212ENST00000555858 GBX1Q14549 363 aa3.87□□□□□ -1.79
MTHFD1-212ENST00000555858 CLUL1Q15846 466 aa3.87□□□□□ -1.79
MTHFD1-212ENST00000555858 VPS72Q15906 364 aa3.87□□□□□ -1.79
MTHFD1-212ENST00000555858 EFCAB2Q5VUJ9 269 aa3.87□□□□□ -1.79
MTHFD1-212ENST00000555858 FSTL4Q6MZW2 842 aa3.87□□□□□ -1.79
MTHFD1-212ENST00000555858 TTLL7Q6ZT98 887 aa3.87□□□□□ -1.79
MTHFD1-212ENST00000555858 SLCO6A1Q86UG4 719 aa3.87□□□□□ -1.79
MTHFD1-212ENST00000555858 CMIPQ8IY22 773 aa3.87□□□□□ -1.79
MTHFD1-212ENST00000555858 UHMK1Q8TAS1 419 aaKnown RBP3.87□□□□□ -1.79
MTHFD1-212ENST00000555858 PIP4K2CQ8TBX8 421 aa3.87□□□□□ -1.79
MTHFD1-212ENST00000555858 PLEKHO2Q8TD55 490 aa3.87□□□□□ -1.79
MTHFD1-212ENST00000555858 SH3RF2Q8TEC5 729 aa3.87□□□□□ -1.79
MTHFD1-212ENST00000555858 USP33Q8TEY7 942 aa3.87□□□□□ -1.79
MTHFD1-212ENST00000555858 PPIL4Q8WUA2 492 aaKnown RBP eCLIP3.87□□□□□ -1.79
MTHFD1-212ENST00000555858 DLG3Q92796 817 aa3.87□□□□□ -1.79
MTHFD1-212ENST00000555858 ORAI2Q96SN7 254 aa3.87□□□□□ -1.79
MTHFD1-212ENST00000555858 MTA3Q9BTC8 594 aa3.87□□□□□ -1.79
MTHFD1-212ENST00000555858 ZMAT4Q9H898 229 aa3.87□□□□□ -1.79
MTHFD1-212ENST00000555858 SP110Q9HB58 689 aa3.87□□□□□ -1.79
MTHFD1-212ENST00000555858 CHST12Q9NRB3 414 aa3.87□□□□□ -1.79
MTHFD1-212ENST00000555858 CCM2LQ9NUG4 571 aaPredicted RBP3.87□□□□□ -1.79
MTHFD1-212ENST00000555858 USP36Q9P275 1121 aaKnown RBP3.87□□□□□ -1.79
MTHFD1-212ENST00000555858 DSEQ9UL01 958 aa3.87□□□□□ -1.79
MTHFD1-212ENST00000555858 INVSQ9Y283 1065 aa3.87□□□□□ -1.79
MTHFD1-212ENST00000555858 PCDHGA9Q9Y5G4 932 aaKnown RBP3.87□□□□□ -1.79
MTHFD1-212ENST00000555858 PCDHGA8Q9Y5G5 932 aa3.87□□□□□ -1.79
MTHFD1-212ENST00000555858 PCDHGA7Q9Y5G6 932 aa3.87□□□□□ -1.79
MTHFD1-212ENST00000555858 PCDHGA6Q9Y5G7 932 aa3.87□□□□□ -1.79
MTHFD1-212ENST00000555858 PCDHGA3Q9Y5H0 932 aa3.87□□□□□ -1.79
MTHFD1-212ENST00000555858 PCDHGA2Q9Y5H1 932 aa3.87□□□□□ -1.79
MTHFD1-212ENST00000555858 ATP23Q9Y6H3 246 aa3.87□□□□□ -1.79
MTHFD1-212ENST00000555858 LDHAP00338 332 aaKnown RBP3.86□□□□□ -1.79
MTHFD1-212ENST00000555858 ASGR2P07307 311 aa3.86□□□□□ -1.79
MTHFD1-212ENST00000555858 HSPA6P17066 643 aa3.86□□□□□ -1.79
MTHFD1-212ENST00000555858 PTX3P26022 381 aaPredicted RBP3.86□□□□□ -1.79
MTHFD1-212ENST00000555858 GJA4P35212 333 aa3.86□□□□□ -1.79
MTHFD1-212ENST00000555858 KIR2DL1P43626 348 aaPredicted RBP3.86□□□□□ -1.79
MTHFD1-212ENST00000555858 KIR2DL2P43627 348 aaPredicted RBP3.86□□□□□ -1.79
MTHFD1-212ENST00000555858 FNTBP49356 437 aa3.86□□□□□ -1.79
MTHFD1-212ENST00000555858 HTRA3P83110 453 aa3.86□□□□□ -1.79
MTHFD1-212ENST00000555858 INSM1Q01101 510 aaPredicted RBP3.86□□□□□ -1.79
MTHFD1-212ENST00000555858 DUSP4Q13115 394 aa3.86□□□□□ -1.79
MTHFD1-212ENST00000555858 ACAP2Q15057 778 aa3.86□□□□□ -1.79
MTHFD1-212ENST00000555858 PDCD1Q15116 288 aa3.86□□□□□ -1.79
MTHFD1-212ENST00000555858 CHRNA2Q15822 529 aa3.86□□□□□ -1.79
MTHFD1-212ENST00000555858 LONRF3Q496Y0 759 aa3.86□□□□□ -1.79
MTHFD1-212ENST00000555858 RRP12Q5JTH9 1297 aaKnown RBP3.86□□□□□ -1.79
MTHFD1-212ENST00000555858 CPZQ66K79 652 aa3.86□□□□□ -1.79
MTHFD1-212ENST00000555858 CYP4F22Q6NT55 531 aa3.86□□□□□ -1.79
MTHFD1-212ENST00000555858 ESRP1Q6NXG1 681 aaKnown RBP3.86□□□□□ -1.79
MTHFD1-212ENST00000555858 NME9Q86XW9 330 aa3.86□□□□□ -1.79
MTHFD1-212ENST00000555858 FAM9AQ8IZU1 332 aaPredicted RBP3.86□□□□□ -1.79
MTHFD1-212ENST00000555858 LZTR1Q8N653 840 aa3.86□□□□□ -1.79
MTHFD1-212ENST00000555858 SSH1Q8WYL5 1049 aa3.86□□□□□ -1.79
MTHFD1-212ENST00000555858 TIFAQ96CG3 184 aa3.86□□□□□ -1.79
MTHFD1-212ENST00000555858 HHIPL1Q96JK4 782 aa3.86□□□□□ -1.79
MTHFD1-212ENST00000555858 HRASLS5Q96KN8 279 aa3.86□□□□□ -1.79
MTHFD1-212ENST00000555858 TEKT5Q96M29 485 aa3.86□□□□□ -1.79
MTHFD1-212ENST00000555858 JMJD8Q96S16 334 aa3.86□□□□□ -1.79
MTHFD1-212ENST00000555858 G6PC3Q9BUM1 346 aa3.86□□□□□ -1.79
MTHFD1-212ENST00000555858 SARGQ9BW04 601 aa3.86□□□□□ -1.79
MTHFD1-212ENST00000555858 CD244Q9BZW8 370 aa3.86□□□□□ -1.79
MTHFD1-212ENST00000555858 MS4A5Q9H3V2 200 aa3.86□□□□□ -1.79
MTHFD1-212ENST00000555858 NMRK2Q9NPI5 230 aa3.86□□□□□ -1.79
MTHFD1-212ENST00000555858 ANLNQ9NQW6 1124 aa3.86□□□□□ -1.79
MTHFD1-212ENST00000555858 KCNH7Q9NS40 1196 aa3.86□□□□□ -1.79
MTHFD1-212ENST00000555858 RWDD3Q9Y3V2 267 aa3.86□□□□□ -1.79
MTHFD1-212ENST00000555858 RNF225M0QZC1 329 aaPredicted RBP3.85□□□□□ -1.79
MTHFD1-212ENST00000555858 ZRANB2O95218 330 aaKnown RBP eCLIP3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms