RNA–Protein interactions for RNA: ENST00000555537.1

NEK9-206, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 675 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-206ENST00000555537 KDM4AO75164 1064 aa9.74□□□□□ -0.85
NEK9-206ENST00000555537 DGKIO75912 1065 aa9.74□□□□□ -0.85
NEK9-206ENST00000555537 GLP2RO95838 553 aa9.74□□□□□ -0.85
NEK9-206ENST00000555537 PDGFBP01127 241 aaPredicted RBP9.74□□□□□ -0.85
NEK9-206ENST00000555537 MMP1P03956 469 aa9.74□□□□□ -0.85
NEK9-206ENST00000555537 ITGB1P05556 798 aa9.74□□□□□ -0.85
NEK9-206ENST00000555537 PARP1P09874 1014 aaKnown RBP9.74□□□□□ -0.85
NEK9-206ENST00000555537 NRIP1P48552 1158 aa9.74□□□□□ -0.85
NEK9-206ENST00000555537 ADAM17P78536 824 aa9.74□□□□□ -0.85
NEK9-206ENST00000555537 SP4Q02446 784 aa9.74□□□□□ -0.85
NEK9-206ENST00000555537 NMIQ13287 307 aaPredicted RBP9.74□□□□□ -0.85
NEK9-206ENST00000555537 LPIN1Q14693 890 aa9.74□□□□□ -0.85
NEK9-206ENST00000555537 PAN2Q504Q3 1202 aaKnown RBP9.74□□□□□ -0.85
NEK9-206ENST00000555537 RTN4RL1Q86UN2 441 aaPredicted RBP9.74□□□□□ -0.85
NEK9-206ENST00000555537 KLHL23Q8NBE8 558 aa9.74□□□□□ -0.85
NEK9-206ENST00000555537 LMBR1Q8WVP7 490 aa9.74□□□□□ -0.85
NEK9-206ENST00000555537 ESR2Q92731 530 aa9.74□□□□□ -0.85
NEK9-206ENST00000555537 PRRX2Q99811 253 aa9.74□□□□□ -0.85
NEK9-206ENST00000555537 AMNQ9BXJ7 453 aa9.74□□□□□ -0.85
NEK9-206ENST00000555537 MAF1Q9H063 256 aa9.74□□□□□ -0.85
NEK9-206ENST00000555537 EHMT1Q9H9B1 1298 aa9.74□□□□□ -0.85
NEK9-206ENST00000555537 USP15Q9Y4E8 981 aaPredicted RBP9.74□□□□□ -0.85
NEK9-206ENST00000555537 MRPL42Q9Y6G3 142 aaKnown RBP9.74□□□□□ -0.85
NEK9-206ENST00000555537 TRIM6-TRIM34B2RNG4 842 aa9.73□□□□□ -0.85
NEK9-206ENST00000555537 B4E1Z4 1266 aa9.73□□□□□ -0.85
NEK9-206ENST00000555537 NOP56O00567 594 aaKnown RBP9.73□□□□□ -0.85
NEK9-206ENST00000555537 CAND2O75155 1236 aa9.73□□□□□ -0.85
NEK9-206ENST00000555537 CENPBP07199 599 aaPredicted RBP9.73□□□□□ -0.85
NEK9-206ENST00000555537 TGFB3P10600 412 aa9.73□□□□□ -0.85
NEK9-206ENST00000555537 GNAT1P11488 350 aa9.73□□□□□ -0.85
NEK9-206ENST00000555537 IBSPP21815 317 aaPredicted RBP9.73□□□□□ -0.85
NEK9-206ENST00000555537 CCND2P30279 289 aa9.73□□□□□ -0.85
NEK9-206ENST00000555537 GATMP50440 423 aa9.73□□□□□ -0.85
NEK9-206ENST00000555537 MRPS9P82933 396 aaKnown RBP9.73□□□□□ -0.85
NEK9-206ENST00000555537 SIGLEC14Q08ET2 396 aa9.73□□□□□ -0.85
NEK9-206ENST00000555537 COASYQ13057 564 aa9.73□□□□□ -0.85
NEK9-206ENST00000555537 CBX2Q14781 532 aaPredicted RBP9.73□□□□□ -0.85
NEK9-206ENST00000555537 PKN1Q16512 942 aa9.73□□□□□ -0.85
NEK9-206ENST00000555537 ASPRV1Q53RT3 343 aa9.73□□□□□ -0.85
NEK9-206ENST00000555537 ASCL5Q7RTU5 278 aa9.73□□□□□ -0.85
NEK9-206ENST00000555537 EFHBQ8N7U6 833 aa9.73□□□□□ -0.85
NEK9-206ENST00000555537 SMRP1Q8NCR6 262 aa9.73□□□□□ -0.85
NEK9-206ENST00000555537 POF1BQ8WVV4 589 aa9.73□□□□□ -0.85
NEK9-206ENST00000555537 LINC01599Q8WXQ3 324 aa9.73□□□□□ -0.85
NEK9-206ENST00000555537 ZBTB10Q96DT7 871 aa9.73□□□□□ -0.85
NEK9-206ENST00000555537 ASIC4Q96FT7 647 aa9.73□□□□□ -0.85
NEK9-206ENST00000555537 ZSCAN10Q96SZ4 725 aaPredicted RBP9.73□□□□□ -0.85
NEK9-206ENST00000555537 GPR20Q99678 358 aa9.73□□□□□ -0.85
NEK9-206ENST00000555537 USP26Q9BXU7 913 aa9.73□□□□□ -0.85
NEK9-206ENST00000555537 ZSWIM5Q9P217 1185 aa9.73□□□□□ -0.85
NEK9-206ENST00000555537 RWDD3Q9Y3V2 267 aa9.73□□□□□ -0.85
NEK9-206ENST00000555537 PCDHA1Q9Y5I3 950 aa9.73□□□□□ -0.85
NEK9-206ENST00000555537 SALL3Q9BXA9 1300 aa9.73□□□□□ -0.85
NEK9-206ENST00000555537 COL4A6Q14031 1691 aa9.73□□□□□ -0.85
NEK9-206ENST00000555537 KMT2EQ8IZD2 1858 aa9.72□□□□□ -0.85
NEK9-206ENST00000555537 CFAP54Q96N23 3096 aa9.72□□□□□ -0.85
NEK9-206ENST00000555537 ZNF213O14771 459 aa9.72□□□□□ -0.85
NEK9-206ENST00000555537 SP100P23497 879 aaPredicted RBP9.72□□□□□ -0.85
NEK9-206ENST00000555537 MGAT3Q09327 533 aa9.72□□□□□ -0.85
NEK9-206ENST00000555537 SEMA3FQ13275 785 aa9.72□□□□□ -0.85
NEK9-206ENST00000555537 ANKRD45Q5TZF3 282 aa9.72□□□□□ -0.85
NEK9-206ENST00000555537 IQCA1Q86XH1 822 aa9.72□□□□□ -0.85
NEK9-206ENST00000555537 HOMER1Q86YM7 354 aa9.72□□□□□ -0.85
NEK9-206ENST00000555537 ENAHQ8N8S7 591 aaPredicted RBP9.72□□□□□ -0.85
NEK9-206ENST00000555537 MICAL1Q8TDZ2 1067 aa9.72□□□□□ -0.85
NEK9-206ENST00000555537 DNAJB3Q8WWF6 145 aa9.72□□□□□ -0.85
NEK9-206ENST00000555537 APOL5Q9BWW9 433 aa9.72□□□□□ -0.85
NEK9-206ENST00000555537 PHF7Q9BWX1 381 aaPredicted RBP9.72□□□□□ -0.85
NEK9-206ENST00000555537 PLVAPQ9BX97 442 aa9.72□□□□□ -0.85
NEK9-206ENST00000555537 RNF41Q9H4P4 317 aaPredicted RBP9.72□□□□□ -0.85
NEK9-206ENST00000555537 TLE6Q9H808 572 aa9.72□□□□□ -0.85
NEK9-206ENST00000555537 AGO3Q9H9G7 860 aaKnown RBP9.72□□□□□ -0.85
NEK9-206ENST00000555537 CCDC171Q6TFL3 1326 aa9.72□□□□□ -0.85
NEK9-206ENST00000555537 DOCK5Q9H7D0 1870 aa9.71□□□□□ -0.85
NEK9-206ENST00000555537 SPATA31C2B4DYI2 1134 aa9.71□□□□□ -0.86
NEK9-206ENST00000555537 KLRF2D3W0D1 207 aa9.71□□□□□ -0.86
NEK9-206ENST00000555537 GCOM1H8Y6P7 765 aaPredicted RBP9.71□□□□□ -0.86
NEK9-206ENST00000555537 ZBTB5O15062 677 aa9.71□□□□□ -0.86
NEK9-206ENST00000555537 POLR2MP0CAP2 368 aa9.71□□□□□ -0.86
NEK9-206ENST00000555537 MARK3P27448 753 aa9.71□□□□□ -0.86
NEK9-206ENST00000555537 CD52P31358 61 aa9.71□□□□□ -0.86
NEK9-206ENST00000555537 GHRHRQ02643 423 aa9.71□□□□□ -0.86
NEK9-206ENST00000555537 SLC35G1Q2M3R5 365 aa9.71□□□□□ -0.86
NEK9-206ENST00000555537 FBXO47Q5MNV8 452 aa9.71□□□□□ -0.86
NEK9-206ENST00000555537 METTL7BQ6UX53 244 aa9.71□□□□□ -0.86
NEK9-206ENST00000555537 VN1R2Q8NFZ6 395 aa9.71□□□□□ -0.86
NEK9-206ENST00000555537 P2RX5Q93086 422 aa9.71□□□□□ -0.86
NEK9-206ENST00000555537 CDY2AQ9Y6F7 541 aa9.71□□□□□ -0.86
NEK9-206ENST00000555537 MYH6P13533 1939 aa9.71□□□□□ -0.86
NEK9-206ENST00000555537 MYO15AQ9UKN7 3530 aa9.71□□□□□ -0.86
NEK9-206ENST00000555537 PCP11498 1178 aaKnown RBP9.7□□□□□ -0.86
NEK9-206ENST00000555537 ICAM3P32942 547 aa9.7□□□□□ -0.86
NEK9-206ENST00000555537 PDE1AP54750 535 aa9.7□□□□□ -0.86
NEK9-206ENST00000555537 ERVFC1P60507 584 aa9.7□□□□□ -0.86
NEK9-206ENST00000555537 IGBP1P78318 339 aa9.7□□□□□ -0.86
NEK9-206ENST00000555537 TMEM62Q0P6H9 643 aa9.7□□□□□ -0.86
NEK9-206ENST00000555537 NEDD9Q14511 834 aa9.7□□□□□ -0.86
NEK9-206ENST00000555537 CRIPAKQ8N1N5 446 aa9.7□□□□□ -0.86
NEK9-206ENST00000555537 PIBF1Q8WXW3 757 aa9.7□□□□□ -0.86
NEK9-206ENST00000555537 PPP2R3CQ969Q6 453 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms