RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 TBX3O15119 743 aa12.11□□□□□ -0.47
TDP1-211ENST00000555178 FARP2O94887 1054 aaPredicted RBP12.11□□□□□ -0.47
TDP1-211ENST00000555178 CYP4A11Q02928 519 aa12.11□□□□□ -0.47
TDP1-211ENST00000555178 TMEM266Q2M3C6 531 aa12.11□□□□□ -0.47
TDP1-211ENST00000555178 CCDC183Q5T5S1 534 aa12.11□□□□□ -0.47
TDP1-211ENST00000555178 CKAP2LQ8IYA6 745 aa12.11□□□□□ -0.47
TDP1-211ENST00000555178 SLFN12Q8IYM2 578 aa12.11□□□□□ -0.47
TDP1-211ENST00000555178 FAM20AQ96MK3 541 aa12.11□□□□□ -0.47
TDP1-211ENST00000555178 NUP62CLQ9H1M0 184 aa12.11□□□□□ -0.47
TDP1-211ENST00000555178 CLSTN2Q9H4D0 955 aa12.11□□□□□ -0.47
TDP1-211ENST00000555178 SERTAD1Q9UHV2 236 aa12.11□□□□□ -0.47
TDP1-211ENST00000555178 GSTTP1A0A1W2PQM5 241 aa12.1□□□□□ -0.47
TDP1-211ENST00000555178 TMEM150BA6NC51 233 aa12.1□□□□□ -0.47
TDP1-211ENST00000555178 ACTN4O43707 911 aaKnown RBP12.1□□□□□ -0.47
TDP1-211ENST00000555178 KINO60870 393 aaKnown RBP12.1□□□□□ -0.47
TDP1-211ENST00000555178 SPATA31C1P0DKV0 1188 aa12.1□□□□□ -0.47
TDP1-211ENST00000555178 CYBAP13498 195 aa12.1□□□□□ -0.47
TDP1-211ENST00000555178 ARHGAP1Q07960 439 aa12.1□□□□□ -0.47
TDP1-211ENST00000555178 GNPTABQ3T906 1256 aa12.1□□□□□ -0.47
TDP1-211ENST00000555178 TRMT1LQ7Z2T5 733 aaKnown RBP12.1□□□□□ -0.47
TDP1-211ENST00000555178 CABP7Q86V35 215 aa12.1□□□□□ -0.47
TDP1-211ENST00000555178 STAMQ92783 540 aa12.1□□□□□ -0.47
TDP1-211ENST00000555178 ABHD16BQ9H3Z7 469 aa12.1□□□□□ -0.47
TDP1-211ENST00000555178 VTA1Q9NP79 307 aa12.1□□□□□ -0.47
TDP1-211ENST00000555178 DDX19AQ9NUU7 478 aaKnown RBP12.1□□□□□ -0.47
TDP1-211ENST00000555178 ARID2Q68CP9 1835 aa12.1□□□□□ -0.47
TDP1-211ENST00000555178 TRIP12Q14669 1992 aaPredicted RBP12.1□□□□□ -0.47
TDP1-211ENST00000555178 STAM2O75886 525 aa12.1□□□□□ -0.47
TDP1-211ENST00000555178 CASP1P29466 404 aa12.1□□□□□ -0.47
TDP1-211ENST00000555178 UBA7P41226 1012 aa12.1□□□□□ -0.47
TDP1-211ENST00000555178 PSMC6P62333 389 aa12.1□□□□□ -0.47
TDP1-211ENST00000555178 GRB10Q13322 594 aa12.1□□□□□ -0.47
TDP1-211ENST00000555178 PPP2R5CQ13362 524 aa12.1□□□□□ -0.47
TDP1-211ENST00000555178 IRF5Q13568 498 aa12.1□□□□□ -0.47
TDP1-211ENST00000555178 CTTNQ14247 550 aaKnown RBP12.1□□□□□ -0.47
TDP1-211ENST00000555178 E2F4Q16254 413 aa12.1□□□□□ -0.47
TDP1-211ENST00000555178 NAALADL2Q58DX5 795 aa12.1□□□□□ -0.47
TDP1-211ENST00000555178 BANK1Q8NDB2 785 aa12.1□□□□□ -0.47
TDP1-211ENST00000555178 RAET1EQ8TD07 263 aa12.1□□□□□ -0.47
TDP1-211ENST00000555178 SNX29Q8TEQ0 813 aa12.1□□□□□ -0.47
TDP1-211ENST00000555178 DYDC2Q96IM9 177 aa12.1□□□□□ -0.47
TDP1-211ENST00000555178 PCYT2Q99447 389 aa12.1□□□□□ -0.47
TDP1-211ENST00000555178 SH2D3AQ9BRG2 576 aa12.1□□□□□ -0.47
TDP1-211ENST00000555178 TEKT3Q9BXF9 490 aa12.1□□□□□ -0.47
TDP1-211ENST00000555178 DISC1Q9NRI5 854 aa12.1□□□□□ -0.47
TDP1-211ENST00000555178 SLC5A4Q9NY91 659 aa12.1□□□□□ -0.47
TDP1-211ENST00000555178 POTEB3A0JP26 581 aa12.09□□□□□ -0.47
TDP1-211ENST00000555178 MYADML2A6NDP7 307 aa12.09□□□□□ -0.47
TDP1-211ENST00000555178 PRR29P0C7W0 189 aa12.09□□□□□ -0.47
TDP1-211ENST00000555178 PRKAR2AP13861 404 aaKnown RBP12.09□□□□□ -0.47
TDP1-211ENST00000555178 PLCG1P19174 1290 aa12.09□□□□□ -0.47
TDP1-211ENST00000555178 ACTR2P61160 394 aa12.09□□□□□ -0.47
TDP1-211ENST00000555178 CELF3Q5SZQ8 465 aaKnown RBP12.09□□□□□ -0.47
TDP1-211ENST00000555178 POTEBQ6S5H4 581 aa12.09□□□□□ -0.47
TDP1-211ENST00000555178 KRBA2Q6ZNG9 492 aa12.09□□□□□ -0.47
TDP1-211ENST00000555178 CATSPER3Q86XQ3 398 aa12.09□□□□□ -0.47
TDP1-211ENST00000555178 TRIM50Q86XT4 487 aa12.09□□□□□ -0.47
TDP1-211ENST00000555178 RASSF8Q8NHQ8 419 aa12.09□□□□□ -0.47
TDP1-211ENST00000555178 SCFD2Q8WU76 684 aa12.09□□□□□ -0.47
TDP1-211ENST00000555178 AK8Q96MA6 479 aa12.09□□□□□ -0.47
TDP1-211ENST00000555178 RIT2Q99578 217 aa12.09□□□□□ -0.47
TDP1-211ENST00000555178 EIF2AK1Q9BQI3 630 aaKnown RBP12.09□□□□□ -0.47
TDP1-211ENST00000555178 TNMDQ9H2S6 317 aa12.09□□□□□ -0.47
TDP1-211ENST00000555178 LOC102724159A0A0B4J2E5 919 aa12.09□□□□□ -0.47
TDP1-211ENST00000555178 SLITRK3O94933 977 aa12.09□□□□□ -0.47
TDP1-211ENST00000555178 PNOCQ13519 176 aa12.09□□□□□ -0.47
TDP1-211ENST00000555178 PDIA5Q14554 519 aa12.09□□□□□ -0.47
TDP1-211ENST00000555178 PWP2Q15269 919 aaKnown RBP12.09□□□□□ -0.47
TDP1-211ENST00000555178 POTEGQ6S5H5 508 aa12.09□□□□□ -0.47
TDP1-211ENST00000555178 CCDC60Q8IWA6 550 aaPredicted RBP12.09□□□□□ -0.47
TDP1-211ENST00000555178 MTRQ99707 1265 aa12.09□□□□□ -0.47
TDP1-211ENST00000555178 CCSER1Q9C0I3 900 aa12.09□□□□□ -0.47
TDP1-211ENST00000555178 JPH1Q9HDC5 661 aaPredicted RBP12.09□□□□□ -0.47
TDP1-211ENST00000555178 SLC9A2Q9UBY0 812 aa12.09□□□□□ -0.47
TDP1-211ENST00000555178 GNEQ9Y223 722 aaKnown RBP12.09□□□□□ -0.47
TDP1-211ENST00000555178 PTPN22Q9Y2R2 807 aa12.09□□□□□ -0.47
TDP1-211ENST00000555178 NFASCO94856 1347 aa12.08□□□□□ -0.48
TDP1-211ENST00000555178 CTAGE5O15320 804 aa12.08□□□□□ -0.48
TDP1-211ENST00000555178 ZNF862O60290 1169 aa12.08□□□□□ -0.48
TDP1-211ENST00000555178 INHAP05111 366 aa12.08□□□□□ -0.48
TDP1-211ENST00000555178 ATP4AP20648 1035 aa12.08□□□□□ -0.48
TDP1-211ENST00000555178 CNGA1P29973 690 aa12.08□□□□□ -0.48
TDP1-211ENST00000555178 BEX3Q00994 111 aa12.08□□□□□ -0.48
TDP1-211ENST00000555178 TNFAIP2Q03169 654 aa12.08□□□□□ -0.48
TDP1-211ENST00000555178 TTLL4Q14679 1199 aa12.08□□□□□ -0.48
TDP1-211ENST00000555178 PDXDC2PQ6P474 469 aa12.08□□□□□ -0.48
TDP1-211ENST00000555178 ABHD15Q6UXT9 468 aa12.08□□□□□ -0.48
TDP1-211ENST00000555178 MSL3Q8N5Y2 521 aaKnown RBP12.08□□□□□ -0.48
TDP1-211ENST00000555178 CNNM3Q8NE01 707 aa12.08□□□□□ -0.48
TDP1-211ENST00000555178 AFG1LQ8WV93 481 aa12.08□□□□□ -0.48
TDP1-211ENST00000555178 EVPLQ92817 2033 aa12.08□□□□□ -0.48
TDP1-211ENST00000555178 HSD17B14Q9BPX1 270 aa12.08□□□□□ -0.48
TDP1-211ENST00000555178 SENP7Q9BQF6 1050 aa12.08□□□□□ -0.48
TDP1-211ENST00000555178 B4DLN1 442 aa12.07□□□□□ -0.48
TDP1-211ENST00000555178 MAFGO15525 162 aa12.07□□□□□ -0.48
TDP1-211ENST00000555178 DYNC1LI2O43237 492 aaPredicted RBP12.07□□□□□ -0.48
TDP1-211ENST00000555178 TGFB3P10600 412 aa12.07□□□□□ -0.48
TDP1-211ENST00000555178 HOXD10P28358 340 aa12.07□□□□□ -0.48
TDP1-211ENST00000555178 TXLNAP40222 546 aa12.07□□□□□ -0.48
TDP1-211ENST00000555178 AFMP43652 599 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms