RNA–Protein interactions for RNA: ENST00000555046.1

TMEM260-206, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-206ENST00000555046 Q4G0T1 1027 aa12.01□□□□□ -0.49
TMEM260-206ENST00000555046 LARP1BQ659C4 914 aaKnown RBP12.01□□□□□ -0.49
TMEM260-206ENST00000555046 CXCL17Q6UXB2 119 aa12.01□□□□□ -0.49
TMEM260-206ENST00000555046 PIK3AP1Q6ZUJ8 805 aa12.01□□□□□ -0.49
TMEM260-206ENST00000555046 PIP4P2Q8N4L2 257 aa12.01□□□□□ -0.49
TMEM260-206ENST00000555046 RASGRP4Q8TDF6 673 aa12.01□□□□□ -0.49
TMEM260-206ENST00000555046 ZFP91Q96JP5 570 aaPredicted RBP12.01□□□□□ -0.49
TMEM260-206ENST00000555046 RIT2Q99578 217 aa12.01□□□□□ -0.49
TMEM260-206ENST00000555046 C1QTNF1Q9BXJ1 281 aa12.01□□□□□ -0.49
TMEM260-206ENST00000555046 AGO4Q9HCK5 861 aaKnown RBP12.01□□□□□ -0.49
TMEM260-206ENST00000555046 JPH1Q9HDC5 661 aaPredicted RBP12.01□□□□□ -0.49
TMEM260-206ENST00000555046 SLC9A2Q9UBY0 812 aa12.01□□□□□ -0.49
TMEM260-206ENST00000555046 NFASCO94856 1347 aa12.01□□□□□ -0.49
TMEM260-206ENST00000555046 TCF20Q9UGU0 1960 aaKnown RBP12.01□□□□□ -0.49
TMEM260-206ENST00000555046 WDFY4Q6ZS81 3184 aa12□□□□□ -0.49
TMEM260-206ENST00000555046 SMCHD1A6NHR9 2005 aa12□□□□□ -0.49
TMEM260-206ENST00000555046 MYADML2A6NDP7 307 aa12□□□□□ -0.49
TMEM260-206ENST00000555046 FAM86B1E9PN63 330 aa12□□□□□ -0.49
TMEM260-206ENST00000555046 CD2BP2O95400 341 aaKnown RBP12□□□□□ -0.49
TMEM260-206ENST00000555046 FAM86B2P0C5J1 330 aa12□□□□□ -0.49
TMEM260-206ENST00000555046 KCNA2P16389 499 aa12□□□□□ -0.49
TMEM260-206ENST00000555046 GJB2P29033 226 aa12□□□□□ -0.49
TMEM260-206ENST00000555046 ATN1P54259 1190 aaPredicted RBP12□□□□□ -0.49
TMEM260-206ENST00000555046 INF2Q27J81 1249 aa12□□□□□ -0.49
TMEM260-206ENST00000555046 LETM2Q2VYF4 491 aa12□□□□□ -0.49
TMEM260-206ENST00000555046 NFRKBQ6P4R8 1299 aa12□□□□□ -0.49
TMEM260-206ENST00000555046 CYP2W1Q8TAV3 490 aa12□□□□□ -0.49
TMEM260-206ENST00000555046 FAM20AQ96MK3 541 aa12□□□□□ -0.49
TMEM260-206ENST00000555046 SEMA6BQ9H3T3 888 aa12□□□□□ -0.49
TMEM260-206ENST00000555046 AZI2Q9H6S1 392 aa12□□□□□ -0.49
TMEM260-206ENST00000555046 ZNF215Q9UL58 517 aaPredicted RBP12□□□□□ -0.49
TMEM260-206ENST00000555046 NOL7Q9UMY1 257 aaKnown RBP12□□□□□ -0.49
TMEM260-206ENST00000555046 XIRP2A4UGR9 3374 aa11.99□□□□□ -0.49
TMEM260-206ENST00000555046 REV3LO60673 3130 aa11.99□□□□□ -0.49
TMEM260-206ENST00000555046 TBX3O15119 743 aa11.99□□□□□ -0.49
TMEM260-206ENST00000555046 CCNT1O60563 726 aaKnown RBP11.99□□□□□ -0.49
TMEM260-206ENST00000555046 ATP9AO75110 1047 aa11.99□□□□□ -0.49
TMEM260-206ENST00000555046 ARP10275 920 aa11.99□□□□□ -0.49
TMEM260-206ENST00000555046 GNAT1P11488 350 aa11.99□□□□□ -0.49
TMEM260-206ENST00000555046 HOXD8P13378 290 aaPredicted RBP11.99□□□□□ -0.49
TMEM260-206ENST00000555046 TRAPPC10P48553 1259 aa11.99□□□□□ -0.49
TMEM260-206ENST00000555046 KRT76Q01546 638 aa11.99□□□□□ -0.49
TMEM260-206ENST00000555046 SEMA3FQ13275 785 aa11.99□□□□□ -0.49
TMEM260-206ENST00000555046 ORC2Q13416 577 aaPredicted RBP11.99□□□□□ -0.49
TMEM260-206ENST00000555046 SNX17Q15036 470 aa11.99□□□□□ -0.49
TMEM260-206ENST00000555046 HSDL1Q3SXM5 330 aa11.99□□□□□ -0.49
TMEM260-206ENST00000555046 TMEM63BQ5T3F8 832 aa11.99□□□□□ -0.49
TMEM260-206ENST00000555046 MIS18BP1Q6P0N0 1132 aa11.99□□□□□ -0.49
TMEM260-206ENST00000555046 ANKRD33Q7Z3H0 272 aa11.99□□□□□ -0.49
TMEM260-206ENST00000555046 SLFN12Q8IYM2 578 aa11.99□□□□□ -0.49
TMEM260-206ENST00000555046 C7orf31Q8N865 590 aa11.99□□□□□ -0.49
TMEM260-206ENST00000555046 OXER1Q8TDS5 423 aa11.99□□□□□ -0.49
TMEM260-206ENST00000555046 UHRF1Q96T88 793 aaPredicted RBP11.99□□□□□ -0.49
TMEM260-206ENST00000555046 GPR20Q99678 358 aa11.99□□□□□ -0.49
TMEM260-206ENST00000555046 TTYH1Q9H313 450 aaPredicted RBP11.99□□□□□ -0.49
TMEM260-206ENST00000555046 SMARCAD1Q9H4L7 1026 aa11.99□□□□□ -0.49
TMEM260-206ENST00000555046 GJB4Q9NTQ9 266 aa11.99□□□□□ -0.49
TMEM260-206ENST00000555046 DDX25Q9UHL0 483 aaKnown RBP11.99□□□□□ -0.49
TMEM260-206ENST00000555046 LTBP2Q14767 1821 aa11.99□□□□□ -0.49
TMEM260-206ENST00000555046 CACNA1BQ00975 2339 aa11.99□□□□□ -0.49
TMEM260-206ENST00000555046 MYO9BQ13459 2157 aa11.98□□□□□ -0.49
TMEM260-206ENST00000555046 IGLV3-22A0A075B6J6 115 aa11.98□□□□□ -0.49
TMEM260-206ENST00000555046 H3BRB1 525 aa11.98□□□□□ -0.49
TMEM260-206ENST00000555046 GAS7O60861 476 aa11.98□□□□□ -0.49
TMEM260-206ENST00000555046 U2AF2P26368 475 aaKnown RBP eCLIP11.98□□□□□ -0.49
TMEM260-206ENST00000555046 SFNP31947 248 aa11.98□□□□□ -0.49
TMEM260-206ENST00000555046 MRE11P49959 708 aa11.98□□□□□ -0.49
TMEM260-206ENST00000555046 SLC26A2P50443 739 aa11.98□□□□□ -0.49
TMEM260-206ENST00000555046 CDK7P50613 346 aa11.98□□□□□ -0.49
TMEM260-206ENST00000555046 RTP1P59025 263 aa11.98□□□□□ -0.49
TMEM260-206ENST00000555046 NR5A1Q13285 461 aa11.98□□□□□ -0.49
TMEM260-206ENST00000555046 BECN1Q14457 450 aa11.98□□□□□ -0.49
TMEM260-206ENST00000555046 LRRC26Q2I0M4 334 aa11.98□□□□□ -0.49
TMEM260-206ENST00000555046 MCTP1Q6DN14 999 aa11.98□□□□□ -0.49
TMEM260-206ENST00000555046 ZNF746Q6NUN9 644 aaPredicted RBP11.98□□□□□ -0.49
TMEM260-206ENST00000555046 NOSTRINQ8IVI9 506 aa11.98□□□□□ -0.49
TMEM260-206ENST00000555046 SMAP1Q8IYB5 467 aaPredicted RBP11.98□□□□□ -0.49
TMEM260-206ENST00000555046 SLC43A3Q8NBI5 491 aa11.98□□□□□ -0.49
TMEM260-206ENST00000555046 GLG1Q92896 1179 aa11.98□□□□□ -0.49
TMEM260-206ENST00000555046 LRFN3Q9BTN0 628 aa11.98□□□□□ -0.49
TMEM260-206ENST00000555046 TUT1Q9H6E5 874 aaKnown RBP11.98□□□□□ -0.49
TMEM260-206ENST00000555046 ATP11BQ9Y2G3 1177 aa11.98□□□□□ -0.49
TMEM260-206ENST00000555046 ADAMTS3O15072 1205 aa11.97□□□□□ -0.49
TMEM260-206ENST00000555046 MSH4O15457 936 aa11.97□□□□□ -0.49
TMEM260-206ENST00000555046 PSAPP07602 524 aa11.97□□□□□ -0.49
TMEM260-206ENST00000555046 FOSBP53539 338 aa11.97□□□□□ -0.49
TMEM260-206ENST00000555046 ACTR2P61160 394 aa11.97□□□□□ -0.49
TMEM260-206ENST00000555046 GUCY1B3Q02153 619 aa11.97□□□□□ -0.49
TMEM260-206ENST00000555046 TLE2Q04725 743 aa11.97□□□□□ -0.49
TMEM260-206ENST00000555046 NBPF20Q3BBV1 942 aa11.97□□□□□ -0.49
TMEM260-206ENST00000555046 LRCH2Q5VUJ6 765 aa11.97□□□□□ -0.49
TMEM260-206ENST00000555046 FAM160B1Q5W0V3 765 aa11.97□□□□□ -0.49
TMEM260-206ENST00000555046 PLPPR4Q7Z2D5 763 aa11.97□□□□□ -0.49
TMEM260-206ENST00000555046 SESTD1Q86VW0 696 aa11.97□□□□□ -0.49
TMEM260-206ENST00000555046 RDM1Q8NG50 284 aa11.97□□□□□ -0.49
TMEM260-206ENST00000555046 TNFRSF25Q93038 417 aa11.97□□□□□ -0.49
TMEM260-206ENST00000555046 MBOAT7Q96N66 472 aa11.97□□□□□ -0.49
TMEM260-206ENST00000555046 TEKT3Q9BXF9 490 aa11.97□□□□□ -0.49
TMEM260-206ENST00000555046 TMEM39AQ9NV64 488 aa11.97□□□□□ -0.49
TMEM260-206ENST00000555046 ERAP1Q9NZ08 941 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms