RNA–Protein interactions for RNA: ENST00000554994.5

ATXN3-231, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-231ENST00000554994 SUGT1Q9Y2Z0 365 aa5.61□□□□□ -1.51
ATXN3-231ENST00000554994 ZFHX2Q9C0A1 2572 aaPredicted RBP5.6□□□□□ -1.51
ATXN3-231ENST00000554994 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.6□□□□□ -1.51
ATXN3-231ENST00000554994 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.6□□□□□ -1.51
ATXN3-231ENST00000554994 TM4SF5O14894 197 aa5.6□□□□□ -1.51
ATXN3-231ENST00000554994 BAG3O95817 575 aa5.6□□□□□ -1.51
ATXN3-231ENST00000554994 CYP2E1P05181 493 aaPredicted RBP5.6□□□□□ -1.51
ATXN3-231ENST00000554994 FOSL1P15407 271 aa5.6□□□□□ -1.51
ATXN3-231ENST00000554994 ITGB8P26012 769 aa5.6□□□□□ -1.51
ATXN3-231ENST00000554994 BTDP43251 543 aa5.6□□□□□ -1.51
ATXN3-231ENST00000554994 USP5P45974 858 aa5.6□□□□□ -1.51
ATXN3-231ENST00000554994 DYNLL1P63167 89 aaKnown RBP5.6□□□□□ -1.51
ATXN3-231ENST00000554994 HDLBPQ00341 1268 aaKnown RBP5.6□□□□□ -1.51
ATXN3-231ENST00000554994 PPATQ06203 517 aa5.6□□□□□ -1.51
ATXN3-231ENST00000554994 PTK7Q13308 1070 aa5.6□□□□□ -1.51
ATXN3-231ENST00000554994 TTF1Q15361 905 aaPredicted RBP5.6□□□□□ -1.51
ATXN3-231ENST00000554994 MSMPQ1L6U9 139 aa5.6□□□□□ -1.51
ATXN3-231ENST00000554994 TRIM60Q495X7 471 aa5.6□□□□□ -1.51
ATXN3-231ENST00000554994 TSHZ3Q63HK5 1081 aa5.6□□□□□ -1.51
ATXN3-231ENST00000554994 GADL1Q6ZQY3 521 aa5.6□□□□□ -1.51
ATXN3-231ENST00000554994 CBLL1Q75N03 491 aa5.6□□□□□ -1.51
ATXN3-231ENST00000554994 VSIG10LQ86VR7 867 aa5.6□□□□□ -1.51
ATXN3-231ENST00000554994 ANKMY2Q8IV38 441 aa5.6□□□□□ -1.51
ATXN3-231ENST00000554994 TEX11Q8IYF3 940 aa5.6□□□□□ -1.51
ATXN3-231ENST00000554994 MIGA1Q8NAN2 632 aa5.6□□□□□ -1.51
ATXN3-231ENST00000554994 FLCNQ8NFG4 579 aa5.6□□□□□ -1.51
ATXN3-231ENST00000554994 OR13H1Q8NG92 308 aa5.6□□□□□ -1.51
ATXN3-231ENST00000554994 SLC7A3Q8WY07 619 aa5.6□□□□□ -1.51
ATXN3-231ENST00000554994 EDC3Q96F86 508 aaKnown RBP5.6□□□□□ -1.51
ATXN3-231ENST00000554994 ZDHHC15Q96MV8 337 aa5.6□□□□□ -1.51
ATXN3-231ENST00000554994 MRIQ9BWK5 157 aa5.6□□□□□ -1.51
ATXN3-231ENST00000554994 KRTAP4-11Q9BYQ6 195 aa5.6□□□□□ -1.51
ATXN3-231ENST00000554994 PBX4Q9BYU1 374 aa5.6□□□□□ -1.51
ATXN3-231ENST00000554994 ANTXR1Q9H6X2 564 aa5.6□□□□□ -1.51
ATXN3-231ENST00000554994 PDLIM7Q9NR12 457 aa5.6□□□□□ -1.51
ATXN3-231ENST00000554994 FAM86C1Q9NVL1 165 aa5.6□□□□□ -1.51
ATXN3-231ENST00000554994 AATFQ9NY61 560 aaKnown RBP eCLIP5.6□□□□□ -1.51
ATXN3-231ENST00000554994 HIF3AQ9Y2N7 669 aa5.6□□□□□ -1.51
ATXN3-231ENST00000554994 DAGLAQ9Y4D2 1042 aa5.6□□□□□ -1.51
ATXN3-231ENST00000554994 MAFBQ9Y5Q3 323 aaPredicted RBP5.6□□□□□ -1.51
ATXN3-231ENST00000554994 NAV1Q8NEY1 1877 aa5.6□□□□□ -1.51
ATXN3-231ENST00000554994 SALL1Q9NSC2 1324 aa5.59□□□□□ -1.51
ATXN3-231ENST00000554994 ZNFX1Q9P2E3 1918 aaKnown RBP5.59□□□□□ -1.51
ATXN3-231ENST00000554994 MYH4Q9Y623 1939 aa5.59□□□□□ -1.51
ATXN3-231ENST00000554994 A6NJR5 290 aa5.59□□□□□ -1.51
ATXN3-231ENST00000554994 USP17L15C9J2P7 530 aa5.59□□□□□ -1.51
ATXN3-231ENST00000554994 USP17L10C9JJH3 530 aa5.59□□□□□ -1.51
ATXN3-231ENST00000554994 USP17L13C9JLJ4 530 aa5.59□□□□□ -1.51
ATXN3-231ENST00000554994 USP17L12C9JPN9 530 aa5.59□□□□□ -1.51
ATXN3-231ENST00000554994 USP17L11C9JVI0 530 aa5.59□□□□□ -1.51
ATXN3-231ENST00000554994 USP17L21D6R901 530 aa5.59□□□□□ -1.51
ATXN3-231ENST00000554994 USP17L18D6R9N7 530 aa5.59□□□□□ -1.51
ATXN3-231ENST00000554994 USP17L22D6RA61 530 aa5.59□□□□□ -1.51
ATXN3-231ENST00000554994 USP17L17D6RBQ6 530 aa5.59□□□□□ -1.51
ATXN3-231ENST00000554994 USP17L19D6RCP7 530 aa5.59□□□□□ -1.51
ATXN3-231ENST00000554994 USP17L20D6RJB6 530 aa5.59□□□□□ -1.51
ATXN3-231ENST00000554994 ERC2O15083 957 aa5.59□□□□□ -1.51
ATXN3-231ENST00000554994 IGHDP01880 384 aa5.59□□□□□ -1.51
ATXN3-231ENST00000554994 CENPBP07199 599 aaPredicted RBP5.59□□□□□ -1.51
ATXN3-231ENST00000554994 JUNBP17275 347 aaPredicted RBP5.59□□□□□ -1.51
ATXN3-231ENST00000554994 PTPRAP18433 802 aa5.59□□□□□ -1.51
ATXN3-231ENST00000554994 RGS3P49796 1198 aa5.59□□□□□ -1.51
ATXN3-231ENST00000554994 CACNB2Q08289 660 aaPredicted RBP5.59□□□□□ -1.51
ATXN3-231ENST00000554994 USP17L24Q0WX57 530 aa5.59□□□□□ -1.51
ATXN3-231ENST00000554994 COL9A2Q14055 689 aaPredicted RBP5.59□□□□□ -1.51
ATXN3-231ENST00000554994 NFKBIBQ15653 356 aa5.59□□□□□ -1.51
ATXN3-231ENST00000554994 SLC9C2Q5TAH2 1124 aa5.59□□□□□ -1.51
ATXN3-231ENST00000554994 MAP3K21Q5TCX8 1036 aa5.59□□□□□ -1.51
ATXN3-231ENST00000554994 TTC39BQ5VTQ0 682 aaPredicted RBP5.59□□□□□ -1.51
ATXN3-231ENST00000554994 APOBEC3HQ6NTF7 200 aaKnown RBP5.59□□□□□ -1.51
ATXN3-231ENST00000554994 MAPKAPK5Q8IW41 473 aa5.59□□□□□ -1.51
ATXN3-231ENST00000554994 ZFPM1Q8IX07 1006 aa5.59□□□□□ -1.51
ATXN3-231ENST00000554994 SHISA5Q8N114 240 aa5.59□□□□□ -1.51
ATXN3-231ENST00000554994 PRSS33Q8NF86 280 aa5.59□□□□□ -1.51
ATXN3-231ENST00000554994 SH3RF3Q8TEJ3 882 aaPredicted RBP5.59□□□□□ -1.51
ATXN3-231ENST00000554994 TGFBRAP1Q8WUH2 860 aa5.59□□□□□ -1.51
ATXN3-231ENST00000554994 RILPL2Q969X0 211 aa5.59□□□□□ -1.51
ATXN3-231ENST00000554994 NSUN4Q96CB9 384 aaKnown RBP5.59□□□□□ -1.51
ATXN3-231ENST00000554994 LNPKQ9C0E8 428 aa5.59□□□□□ -1.51
ATXN3-231ENST00000554994 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.59□□□□□ -1.51
ATXN3-231ENST00000554994 NKX2-4Q9H2Z4 354 aa5.59□□□□□ -1.51
ATXN3-231ENST00000554994 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.59□□□□□ -1.51
ATXN3-231ENST00000554994 ECHDC1Q9NTX5 307 aa5.59□□□□□ -1.51
ATXN3-231ENST00000554994 PAG1Q9NWQ8 432 aa5.59□□□□□ -1.51
ATXN3-231ENST00000554994 SAP30BPQ9UHR5 308 aaKnown RBP5.59□□□□□ -1.51
ATXN3-231ENST00000554994 RALYQ9UKM9 306 aaKnown RBP5.59□□□□□ -1.51
ATXN3-231ENST00000554994 WDFY4Q6ZS81 3184 aa5.59□□□□□ -1.51
ATXN3-231ENST00000554994 ATRXP46100 2492 aa5.59□□□□□ -1.51
ATXN3-231ENST00000554994 XIRP2A4UGR9 3374 aa5.59□□□□□ -1.51
ATXN3-231ENST00000554994 PLXNA1Q9UIW2 1896 aa5.58□□□□□ -1.52
ATXN3-231ENST00000554994 PTPRZ1P23471 2315 aaPredicted RBP5.58□□□□□ -1.52
ATXN3-231ENST00000554994 ZNF318Q5VUA4 2279 aa5.58□□□□□ -1.52
ATXN3-231ENST00000554994 MROH7-TTC4A0A0A0MT08 1334 aa5.58□□□□□ -1.52
ATXN3-231ENST00000554994 DNAH12Q6ZR08 3092 aa5.58□□□□□ -1.52
ATXN3-231ENST00000554994 MED19A0JLT2 244 aaPredicted RBP5.58□□□□□ -1.52
ATXN3-231ENST00000554994 CYP26A1O43174 497 aa5.58□□□□□ -1.52
ATXN3-231ENST00000554994 PEX10O60683 326 aa5.58□□□□□ -1.52
ATXN3-231ENST00000554994 APPP05067 770 aa5.58□□□□□ -1.52
ATXN3-231ENST00000554994 POLR3DP05423 398 aaPredicted RBP5.58□□□□□ -1.52
ATXN3-231ENST00000554994 ITGB5P18084 799 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms