RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 HDAC6Q9UBN7 1215 aa14.05□□□□□ -0.16
SYNE2-214ENST00000554928 RANBP2P49792 3224 aaKnown RBP14.05□□□□□ -0.16
SYNE2-214ENST00000554928 KIAA0355O15063 1070 aa14.04□□□□□ -0.16
SYNE2-214ENST00000554928 MSH4O15457 936 aa14.04□□□□□ -0.16
SYNE2-214ENST00000554928 MAFGO15525 162 aa14.04□□□□□ -0.16
SYNE2-214ENST00000554928 SLC37A4O43826 429 aa14.04□□□□□ -0.16
SYNE2-214ENST00000554928 KRT2P35908 639 aa14.04□□□□□ -0.16
SYNE2-214ENST00000554928 TCF7P36402 384 aaPredicted RBP14.04□□□□□ -0.16
SYNE2-214ENST00000554928 EPHB4P54760 987 aa14.04□□□□□ -0.16
SYNE2-214ENST00000554928 DIS3L2Q8IYB7 885 aaKnown RBP14.04□□□□□ -0.16
SYNE2-214ENST00000554928 FAM177A1Q8N128 213 aaPredicted RBP14.04□□□□□ -0.16
SYNE2-214ENST00000554928 MBOAT7Q96N66 472 aa14.04□□□□□ -0.16
SYNE2-214ENST00000554928 PPP1R12CQ9BZL4 782 aa14.04□□□□□ -0.16
SYNE2-214ENST00000554928 JPH1Q9HDC5 661 aaPredicted RBP14.04□□□□□ -0.16
SYNE2-214ENST00000554928 SLC9A2Q9UBY0 812 aa14.04□□□□□ -0.16
SYNE2-214ENST00000554928 NFASCO94856 1347 aa14.04□□□□□ -0.16
SYNE2-214ENST00000554928 CCDC194A0A1B0GVG4 234 aa14.03□□□□□ -0.16
SYNE2-214ENST00000554928 KIF28PB7ZC32 967 aa14.03□□□□□ -0.16
SYNE2-214ENST00000554928 IPO5O00410 1097 aaKnown RBP14.03□□□□□ -0.16
SYNE2-214ENST00000554928 XBP1P17861 261 aa14.03□□□□□ -0.16
SYNE2-214ENST00000554928 CYP2C18P33260 490 aa14.03□□□□□ -0.16
SYNE2-214ENST00000554928 USP11P51784 963 aa14.03□□□□□ -0.16
SYNE2-214ENST00000554928 ACTR2P61160 394 aa14.03□□□□□ -0.16
SYNE2-214ENST00000554928 LETM2Q2VYF4 491 aa14.03□□□□□ -0.16
SYNE2-214ENST00000554928 NFRKBQ6P4R8 1299 aa14.03□□□□□ -0.16
SYNE2-214ENST00000554928 SEPT1Q8WYJ6 367 aa14.03□□□□□ -0.16
SYNE2-214ENST00000554928 DHX38Q92620 1227 aaKnown RBP14.03□□□□□ -0.16
SYNE2-214ENST00000554928 WNT8BQ93098 351 aa14.03□□□□□ -0.16
SYNE2-214ENST00000554928 C8orf76Q96K31 380 aa14.03□□□□□ -0.16
SYNE2-214ENST00000554928 ZNF577Q9BSK1 485 aa14.03□□□□□ -0.16
SYNE2-214ENST00000554928 RNPEPQ9H4A4 650 aa14.03□□□□□ -0.16
SYNE2-214ENST00000554928 MROH7Q68CQ1 1323 aa14.03□□□□□ -0.16
SYNE2-214ENST00000554928 LTBP2Q14767 1821 aa14.03□□□□□ -0.16
SYNE2-214ENST00000554928 CYP3A7-CYP3A51PA0A087WV96 503 aa14.02□□□□□ -0.17
SYNE2-214ENST00000554928 C19orf67A6NJJ6 358 aa14.02□□□□□ -0.17
SYNE2-214ENST00000554928 H3BRB1 525 aa14.02□□□□□ -0.17
SYNE2-214ENST00000554928 CYP3A7P24462 503 aa14.02□□□□□ -0.17
SYNE2-214ENST00000554928 MARK3P27448 753 aa14.02□□□□□ -0.17
SYNE2-214ENST00000554928 HMGN5P82970 282 aaKnown RBP14.02□□□□□ -0.17
SYNE2-214ENST00000554928 SETQ01105 290 aaPredicted RBP14.02□□□□□ -0.17
SYNE2-214ENST00000554928 Q4G0T1 1027 aa14.02□□□□□ -0.17
SYNE2-214ENST00000554928 SESTD1Q86VW0 696 aa14.02□□□□□ -0.17
SYNE2-214ENST00000554928 GIMAP8Q8ND71 665 aaPredicted RBP14.02□□□□□ -0.17
SYNE2-214ENST00000554928 ZBTB10Q96DT7 871 aa14.02□□□□□ -0.17
SYNE2-214ENST00000554928 SDF4Q9BRK5 362 aa14.02□□□□□ -0.17
SYNE2-214ENST00000554928 NOC4LQ9BVI4 516 aaKnown RBP14.02□□□□□ -0.17
SYNE2-214ENST00000554928 WNT8AQ9H1J5 351 aa14.02□□□□□ -0.17
SYNE2-214ENST00000554928 TUT1Q9H6E5 874 aaKnown RBP14.02□□□□□ -0.17
SYNE2-214ENST00000554928 GTF2IRD1Q9UHL9 959 aa14.02□□□□□ -0.17
SYNE2-214ENST00000554928 TLR3O15455 904 aaKnown RBP14.01□□□□□ -0.17
SYNE2-214ENST00000554928 LGR5O75473 907 aa14.01□□□□□ -0.17
SYNE2-214ENST00000554928 ATG7O95352 703 aa14.01□□□□□ -0.17
SYNE2-214ENST00000554928 SMIM10L2AP0DMW4 78 aa14.01□□□□□ -0.17
SYNE2-214ENST00000554928 SMIM10L2BP0DMW5 78 aa14.01□□□□□ -0.17
SYNE2-214ENST00000554928 RAG1P15918 1043 aa14.01□□□□□ -0.17
SYNE2-214ENST00000554928 GJB2P29033 226 aa14.01□□□□□ -0.17
SYNE2-214ENST00000554928 TRIM29Q14134 588 aa14.01□□□□□ -0.17
SYNE2-214ENST00000554928 PTGISQ16647 500 aa14.01□□□□□ -0.17
SYNE2-214ENST00000554928 ABHD15Q6UXT9 468 aa14.01□□□□□ -0.17
SYNE2-214ENST00000554928 NEK8Q86SG6 692 aa14.01□□□□□ -0.17
SYNE2-214ENST00000554928 FAM184AQ8NB25 1140 aa14.01□□□□□ -0.17
SYNE2-214ENST00000554928 FBXO18Q8NFZ0 1043 aa14.01□□□□□ -0.17
SYNE2-214ENST00000554928 ETNPPLQ8TBG4 499 aa14.01□□□□□ -0.17
SYNE2-214ENST00000554928 SLC5A5Q92911 643 aa14.01□□□□□ -0.17
SYNE2-214ENST00000554928 VWCEQ96DN2 955 aa14.01□□□□□ -0.17
SYNE2-214ENST00000554928 PRKAG2Q9UGJ0 569 aa14.01□□□□□ -0.17
SYNE2-214ENST00000554928 DDX25Q9UHL0 483 aaKnown RBP14.01□□□□□ -0.17
SYNE2-214ENST00000554928 TIMP1P01033 207 aa14□□□□□ -0.17
SYNE2-214ENST00000554928 HOXC8P31273 242 aa14□□□□□ -0.17
SYNE2-214ENST00000554928 MCM2P49736 904 aa14□□□□□ -0.17
SYNE2-214ENST00000554928 CCL23P55773 120 aa14□□□□□ -0.17
SYNE2-214ENST00000554928 PTPN11Q06124 597 aaPredicted RBP14□□□□□ -0.17
SYNE2-214ENST00000554928 CUL4AQ13619 759 aa14□□□□□ -0.17
SYNE2-214ENST00000554928 C9orf50Q5SZB4 431 aa14□□□□□ -0.17
SYNE2-214ENST00000554928 CCDC60Q8IWA6 550 aaPredicted RBP14□□□□□ -0.17
SYNE2-214ENST00000554928 C7orf31Q8N865 590 aa14□□□□□ -0.17
SYNE2-214ENST00000554928 SCLYQ96I15 445 aa14□□□□□ -0.17
SYNE2-214ENST00000554928 KATNAL1Q9BW62 490 aa14□□□□□ -0.17
SYNE2-214ENST00000554928 UNC45AQ9H3U1 944 aa14□□□□□ -0.17
SYNE2-214ENST00000554928 HIPK3Q9H422 1215 aa14□□□□□ -0.17
SYNE2-214ENST00000554928 SETD4Q9NVD3 440 aa14□□□□□ -0.17
SYNE2-214ENST00000554928 EMSYQ7Z589 1322 aa13.99□□□□□ -0.17
SYNE2-214ENST00000554928 IGKV6D-21A0A0A0MT36 114 aa13.99□□□□□ -0.17
SYNE2-214ENST00000554928 SPDYE4A6NLX3 237 aa13.99□□□□□ -0.17
SYNE2-214ENST00000554928 TREHO43280 583 aa13.99□□□□□ -0.17
SYNE2-214ENST00000554928 CHMP2AO43633 222 aa13.99□□□□□ -0.17
SYNE2-214ENST00000554928 CCNT1O60563 726 aaKnown RBP13.99□□□□□ -0.17
SYNE2-214ENST00000554928 PSMD10O75832 226 aa13.99□□□□□ -0.17
SYNE2-214ENST00000554928 SUPT20HL2P0C7V6 817 aa13.99□□□□□ -0.17
SYNE2-214ENST00000554928 ATP2B1P20020 1258 aa13.99□□□□□ -0.17
SYNE2-214ENST00000554928 ATP4AP20648 1035 aa13.99□□□□□ -0.17
SYNE2-214ENST00000554928 TRIM71Q2Q1W2 868 aaKnown RBP13.99□□□□□ -0.17
SYNE2-214ENST00000554928 MOXD1Q6UVY6 613 aa13.99□□□□□ -0.17
SYNE2-214ENST00000554928 B3GNT9Q6UX72 402 aa13.99□□□□□ -0.17
SYNE2-214ENST00000554928 C16orf59Q7L2K0 433 aa13.99□□□□□ -0.17
SYNE2-214ENST00000554928 TRAPPC12Q8WVT3 735 aa13.99□□□□□ -0.17
SYNE2-214ENST00000554928 HAS1Q92839 578 aa13.99□□□□□ -0.17
SYNE2-214ENST00000554928 GLG1Q92896 1179 aa13.99□□□□□ -0.17
SYNE2-214ENST00000554928 LBHD1Q9BQE6 289 aaPredicted RBP13.99□□□□□ -0.17
SYNE2-214ENST00000554928 SEZ6LQ9BYH1 1024 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms