RNA–Protein interactions for RNA: ENST00000554879.5

PCNX1-209, Transcript of pecanex 1, humanhuman

TSL 1 (best)

Gene PCNX1, Length 4,431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-209ENST00000554879 TEX33O43247 280 aa18.24■□□□□ 0.51
PCNX1-209ENST00000554879 BPIFA3Q9BQP9 254 aa18.24■□□□□ 0.51
PCNX1-209ENST00000554879 TUBGCP2Q9BSJ2 902 aa18.24■□□□□ 0.51
PCNX1-209ENST00000554879 TULP2O00295 520 aa18.24■□□□□ 0.51
PCNX1-209ENST00000554879 USO1O60763 962 aaKnown RBP18.24■□□□□ 0.51
PCNX1-209ENST00000554879 JAG1P78504 1218 aa18.24■□□□□ 0.51
PCNX1-209ENST00000554879 TRPM4Q8TD43 1214 aa18.24■□□□□ 0.51
PCNX1-209ENST00000554879 VPS33BQ9H267 617 aa18.24■□□□□ 0.51
PCNX1-209ENST00000554879 CLNS1AP54105 237 aaKnown RBP18.24■□□□□ 0.51
PCNX1-209ENST00000554879 STK4Q13043 487 aa18.24■□□□□ 0.51
PCNX1-209ENST00000554879 KRT31Q15323 416 aa18.24■□□□□ 0.51
PCNX1-209ENST00000554879 XKR9Q5GH70 373 aa18.24■□□□□ 0.51
PCNX1-209ENST00000554879 SEPT14Q6ZU15 432 aa18.24■□□□□ 0.51
PCNX1-209ENST00000554879 SCLT1Q96NL6 688 aa18.24■□□□□ 0.51
PCNX1-209ENST00000554879 RHOXF2BP0C7M4 288 aa18.24■□□□□ 0.51
PCNX1-209ENST00000554879 CASP14P31944 242 aa18.24■□□□□ 0.51
PCNX1-209ENST00000554879 RRP1BQ14684 758 aaKnown RBP18.24■□□□□ 0.51
PCNX1-209ENST00000554879 CEP55Q53EZ4 464 aa18.24■□□□□ 0.51
PCNX1-209ENST00000554879 LPAR1Q92633 364 aa18.24■□□□□ 0.51
PCNX1-209ENST00000554879 DYDC2Q96IM9 177 aa18.24■□□□□ 0.51
PCNX1-209ENST00000554879 RHOXF2Q9BQY4 288 aa18.24■□□□□ 0.51
PCNX1-209ENST00000554879 IPO5O00410 1097 aaKnown RBP18.23■□□□□ 0.51
PCNX1-209ENST00000554879 CD44P16070 742 aaKnown RBP18.23■□□□□ 0.51
PCNX1-209ENST00000554879 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.23■□□□□ 0.51
PCNX1-209ENST00000554879 TUBGCP6Q96RT7 1819 aa18.23■□□□□ 0.51
PCNX1-209ENST00000554879 CDC25BP30305 580 aa18.23■□□□□ 0.51
PCNX1-209ENST00000554879 FAM43BQ6ZT52 329 aaPredicted RBP18.23■□□□□ 0.51
PCNX1-209ENST00000554879 NLRC4Q9NPP4 1024 aa18.23■□□□□ 0.51
PCNX1-209ENST00000554879 MYMKA6NI61 221 aa18.23■□□□□ 0.51
PCNX1-209ENST00000554879 CCDC175P0C221 793 aa18.23■□□□□ 0.51
PCNX1-209ENST00000554879 CCNE1P24864 410 aa18.23■□□□□ 0.51
PCNX1-209ENST00000554879 FAM178BQ8IXR5 827 aa18.23■□□□□ 0.51
PCNX1-209ENST00000554879 WDR11Q9BZH6 1224 aa18.23■□□□□ 0.51
PCNX1-209ENST00000554879 KCNA3P22001 575 aa18.22■□□□□ 0.51
PCNX1-209ENST00000554879 MTMR1Q13613 665 aa18.22■□□□□ 0.51
PCNX1-209ENST00000554879 BAATQ14032 418 aaPredicted RBP18.22■□□□□ 0.51
PCNX1-209ENST00000554879 ODR4Q5SWX8 454 aa18.22■□□□□ 0.51
PCNX1-209ENST00000554879 DHTKD1Q96HY7 919 aaPredicted RBP18.22■□□□□ 0.51
PCNX1-209ENST00000554879 FAM20AQ96MK3 541 aa18.22■□□□□ 0.51
PCNX1-209ENST00000554879 NUDT12Q9BQG2 462 aa18.22■□□□□ 0.51
PCNX1-209ENST00000554879 NID2Q14112 1375 aa18.22■□□□□ 0.51
PCNX1-209ENST00000554879 NFIBO00712 420 aa18.22■□□□□ 0.51
PCNX1-209ENST00000554879 MYL1P05976 194 aa18.22■□□□□ 0.51
PCNX1-209ENST00000554879 CYP2J2P51589 502 aa18.22■□□□□ 0.51
PCNX1-209ENST00000554879 PDIA5Q14554 519 aa18.22■□□□□ 0.51
PCNX1-209ENST00000554879 PPP4R3AQ6IN85 833 aa18.22■□□□□ 0.51
PCNX1-209ENST00000554879 VSTM4Q8IW00 320 aa18.22■□□□□ 0.51
PCNX1-209ENST00000554879 ZNF541Q9H0D2 1346 aa18.22■□□□□ 0.51
PCNX1-209ENST00000554879 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.22■□□□□ 0.517e-8■■■■■ 186.3
PCNX1-209ENST00000554879 MMS22LQ6ZRQ5 1243 aa18.22■□□□□ 0.51
PCNX1-209ENST00000554879 SCYL3Q8IZE3 742 aa18.22■□□□□ 0.51
PCNX1-209ENST00000554879 IGKV6D-41A0A0C4DH26 115 aa18.22■□□□□ 0.51
PCNX1-209ENST00000554879 VCAM1P19320 739 aa18.22■□□□□ 0.51
PCNX1-209ENST00000554879 RPL13P26373 211 aaKnown RBP18.22■□□□□ 0.51
PCNX1-209ENST00000554879 GCKP35557 465 aa18.22■□□□□ 0.51
PCNX1-209ENST00000554879 ADAM9Q13443 819 aa18.22■□□□□ 0.51
PCNX1-209ENST00000554879 UNC13DQ70J99 1090 aa18.22■□□□□ 0.51
PCNX1-209ENST00000554879 MPHOSPH6Q99547 160 aaKnown RBP18.22■□□□□ 0.51
PCNX1-209ENST00000554879 PDE11AQ9HCR9 933 aa18.22■□□□□ 0.51
PCNX1-209ENST00000554879 COL4A3BPQ9Y5P4 624 aa18.22■□□□□ 0.51
PCNX1-209ENST00000554879 CLIC2O15247 247 aa18.21■□□□□ 0.51
PCNX1-209ENST00000554879 PRPF6O94906 941 aaKnown RBP18.21■□□□□ 0.51
PCNX1-209ENST00000554879 SNHG28P0DPA3 235 aa18.21■□□□□ 0.51
PCNX1-209ENST00000554879 PPP2R3AQ06190 1150 aa18.21■□□□□ 0.51
PCNX1-209ENST00000554879 RBL2Q08999 1139 aa18.21■□□□□ 0.51
PCNX1-209ENST00000554879 GNPTABQ3T906 1256 aa18.21■□□□□ 0.51
PCNX1-209ENST00000554879 FAM102BQ5T8I3 360 aa18.21■□□□□ 0.51
PCNX1-209ENST00000554879 FKBP1CQ5VVH2 108 aa18.21■□□□□ 0.51
PCNX1-209ENST00000554879 ORC2Q13416 577 aaPredicted RBP18.21■□□□□ 0.51
PCNX1-209ENST00000554879 PDXDC2PQ6P474 469 aa18.21■□□□□ 0.51
PCNX1-209ENST00000554879 DLK2Q6UY11 383 aa18.21■□□□□ 0.51
PCNX1-209ENST00000554879 CCDC42Q96M95 316 aa18.21■□□□□ 0.51
PCNX1-209ENST00000554879 GUCA1BQ9UMX6 200 aa18.21■□□□□ 0.51
PCNX1-209ENST00000554879 EIF2AK1Q9BQI3 630 aaKnown RBP18.21■□□□□ 0.51
PCNX1-209ENST00000554879 EMILIN3Q9NT22 766 aa18.21■□□□□ 0.51
PCNX1-209ENST00000554879 STK24Q9Y6E0 443 aa18.21■□□□□ 0.51
PCNX1-209ENST00000554879 NPM3O75607 178 aaKnown RBP18.2■□□□□ 0.5
PCNX1-209ENST00000554879 HARSP12081 509 aaKnown RBP18.2■□□□□ 0.5
PCNX1-209ENST00000554879 RAPGEF1Q13905 1077 aa18.2■□□□□ 0.5
PCNX1-209ENST00000554879 COG2Q14746 738 aa18.2■□□□□ 0.5
PCNX1-209ENST00000554879 TCHPQ9BT92 498 aa18.2■□□□□ 0.5
PCNX1-209ENST00000554879 CACNA1SQ13698 1873 aa18.2■□□□□ 0.5
PCNX1-209ENST00000554879 ADM5C9JUS6 153 aa18.2■□□□□ 0.5
PCNX1-209ENST00000554879 GRB10Q13322 594 aa18.2■□□□□ 0.5
PCNX1-209ENST00000554879 TCP11X2Q5H9J9 407 aa18.2■□□□□ 0.5
PCNX1-209ENST00000554879 ARHGAP6O43182 974 aa18.2■□□□□ 0.5
PCNX1-209ENST00000554879 KRT13P13646 458 aa18.2■□□□□ 0.5
PCNX1-209ENST00000554879 BMP6P22004 513 aa18.2■□□□□ 0.5
PCNX1-209ENST00000554879 NOP2P46087 812 aaKnown RBP18.2■□□□□ 0.5
PCNX1-209ENST00000554879 RPS6P62753 249 aaKnown RBP18.2■□□□□ 0.5
PCNX1-209ENST00000554879 HOXC10Q9NYD6 342 aa18.2■□□□□ 0.5
PCNX1-209ENST00000554879 CCDC88AQ3V6T2 1871 aa18.2■□□□□ 0.5
PCNX1-209ENST00000554879 NOP56O00567 594 aaKnown RBP18.2■□□□□ 0.5
PCNX1-209ENST00000554879 EPB41P11171 864 aaKnown RBP18.2■□□□□ 0.5
PCNX1-209ENST00000554879 COASYQ13057 564 aa18.2■□□□□ 0.5
PCNX1-209ENST00000554879 TTC19Q6DKK2 380 aaPredicted RBP18.2■□□□□ 0.5
PCNX1-209ENST00000554879 SLC10A4Q96EP9 437 aa18.2■□□□□ 0.5
PCNX1-209ENST00000554879 IVNS1ABPQ9Y6Y0 642 aa18.2■□□□□ 0.5
PCNX1-209ENST00000554879 MSH4O15457 936 aa18.19■□□□□ 0.5
PCNX1-209ENST00000554879 HOMEZQ8IX15 550 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms