RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 UBAP1LF5GYI3 381 aa3.83□□□□□ -1.8
SEC23A-207ENST00000554615 TGFB1I1O43294 461 aa3.83□□□□□ -1.8
SEC23A-207ENST00000554615 SLC37A4O43826 429 aa3.83□□□□□ -1.8
SEC23A-207ENST00000554615 C1QAP02745 245 aa3.83□□□□□ -1.8
SEC23A-207ENST00000554615 XBP1P17861 261 aa3.83□□□□□ -1.8
SEC23A-207ENST00000554615 CASQ1P31415 396 aa3.83□□□□□ -1.8
SEC23A-207ENST00000554615 MAN1A1P33908 653 aa3.83□□□□□ -1.8
SEC23A-207ENST00000554615 ACTN2P35609 894 aa3.83□□□□□ -1.8
SEC23A-207ENST00000554615 CHMP4BP1P59074 171 aa3.83□□□□□ -1.8
SEC23A-207ENST00000554615 ST5P78524 1137 aa3.83□□□□□ -1.8
SEC23A-207ENST00000554615 CKAP4Q07065 602 aaKnown RBP3.83□□□□□ -1.8
SEC23A-207ENST00000554615 STK4Q13043 487 aa3.83□□□□□ -1.8
SEC23A-207ENST00000554615 ALCAMQ13740 583 aa3.83□□□□□ -1.8
SEC23A-207ENST00000554615 NFIXQ14938 502 aa3.83□□□□□ -1.8
SEC23A-207ENST00000554615 EAPPQ56P03 285 aaPredicted RBP3.83□□□□□ -1.8
SEC23A-207ENST00000554615 TTMPQ5BVD1 217 aa3.83□□□□□ -1.8
SEC23A-207ENST00000554615 PIGWQ7Z7B1 504 aa3.83□□□□□ -1.8
SEC23A-207ENST00000554615 FMNL3Q8IVF7 1028 aa3.83□□□□□ -1.8
SEC23A-207ENST00000554615 OGFOD1Q8N543 542 aa3.83□□□□□ -1.8
SEC23A-207ENST00000554615 PNMA1Q8ND90 353 aa3.83□□□□□ -1.8
SEC23A-207ENST00000554615 TRIM58Q8NG06 486 aa3.83□□□□□ -1.8
SEC23A-207ENST00000554615 PSPC1Q8WXF1 523 aaKnown RBP3.83□□□□□ -1.8
SEC23A-207ENST00000554615 LACRTQ9GZZ8 138 aa3.83□□□□□ -1.8
SEC23A-207ENST00000554615 GBP3Q9H0R5 595 aa3.83□□□□□ -1.8
SEC23A-207ENST00000554615 FAM198AQ9UFP1 575 aa3.83□□□□□ -1.8
SEC23A-207ENST00000554615 MUC22E2RYF6 1773 aaPredicted RBP3.83□□□□□ -1.8
SEC23A-207ENST00000554615 CSDE1O75534 798 aaKnown RBP3.83□□□□□ -1.8
SEC23A-207ENST00000554615 RASSF9O75901 435 aa3.83□□□□□ -1.8
SEC23A-207ENST00000554615 CYP1A2P05177 515 aa3.83□□□□□ -1.8
SEC23A-207ENST00000554615 TCP1P17987 556 aaKnown RBP3.83□□□□□ -1.8
SEC23A-207ENST00000554615 PLCG1P19174 1290 aa3.83□□□□□ -1.8
SEC23A-207ENST00000554615 MAGEA6P43360 314 aa3.83□□□□□ -1.8
SEC23A-207ENST00000554615 TXNRD1Q16881 649 aa3.83□□□□□ -1.8
SEC23A-207ENST00000554615 NOL9Q5SY16 702 aaKnown RBP3.83□□□□□ -1.8
SEC23A-207ENST00000554615 DCAF12L1Q5VU92 463 aa3.83□□□□□ -1.8
SEC23A-207ENST00000554615 DUPD1Q68J44 220 aa3.83□□□□□ -1.8
SEC23A-207ENST00000554615 KCNK18Q7Z418 384 aa3.83□□□□□ -1.8
SEC23A-207ENST00000554615 TDRPQ86YL5 185 aa3.83□□□□□ -1.8
SEC23A-207ENST00000554615 SLC35F6Q8N357 371 aa3.83□□□□□ -1.8
SEC23A-207ENST00000554615 NOA1Q8NC60 698 aaKnown RBP3.83□□□□□ -1.8
SEC23A-207ENST00000554615 RBM46Q8TBY0 533 aaKnown RBP3.83□□□□□ -1.8
SEC23A-207ENST00000554615 PBKQ96KB5 322 aa3.83□□□□□ -1.8
SEC23A-207ENST00000554615 MMS19Q96T76 1030 aa3.83□□□□□ -1.8
SEC23A-207ENST00000554615 CHP1Q99653 195 aa3.83□□□□□ -1.8
SEC23A-207ENST00000554615 SLITRK6Q9H5Y7 841 aa3.83□□□□□ -1.8
SEC23A-207ENST00000554615 TLE6Q9H808 572 aa3.83□□□□□ -1.8
SEC23A-207ENST00000554615 TMBIM4Q9HC24 238 aa3.83□□□□□ -1.8
SEC23A-207ENST00000554615 CABP5Q9NP86 173 aa3.83□□□□□ -1.8
SEC23A-207ENST00000554615 DDX4Q9NQI0 724 aaKnown RBP3.83□□□□□ -1.8
SEC23A-207ENST00000554615 VPS54Q9P1Q0 977 aa3.83□□□□□ -1.8
SEC23A-207ENST00000554615 FEZ2Q9UHY8 353 aaPredicted RBP3.83□□□□□ -1.8
SEC23A-207ENST00000554615 NOCTQ9UK39 431 aaKnown RBP3.83□□□□□ -1.8
SEC23A-207ENST00000554615 ADGRA2Q96PE1 1338 aa3.83□□□□□ -1.8
SEC23A-207ENST00000554615 PHF20L1A8MW92 1017 aa3.82□□□□□ -1.8
SEC23A-207ENST00000554615 ZBTB5O15062 677 aa3.82□□□□□ -1.8
SEC23A-207ENST00000554615 ATP1A1P05023 1023 aaKnown RBP3.82□□□□□ -1.8
SEC23A-207ENST00000554615 POLR3DP05423 398 aaPredicted RBP3.82□□□□□ -1.8
SEC23A-207ENST00000554615 MYBL2P10244 700 aa3.82□□□□□ -1.8
SEC23A-207ENST00000554615 VCAM1P19320 739 aa3.82□□□□□ -1.8
SEC23A-207ENST00000554615 CDC25AP30304 524 aa3.82□□□□□ -1.8
SEC23A-207ENST00000554615 ZNF280AP59817 542 aaPredicted RBP3.82□□□□□ -1.8
SEC23A-207ENST00000554615 KLRC3Q07444 240 aa3.82□□□□□ -1.8
SEC23A-207ENST00000554615 CHAF1AQ13111 956 aaPredicted RBP3.82□□□□□ -1.8
SEC23A-207ENST00000554615 RIPK1Q13546 671 aa3.82□□□□□ -1.8
SEC23A-207ENST00000554615 IRF5Q13568 498 aa3.82□□□□□ -1.8
SEC23A-207ENST00000554615 FRG1Q14331 258 aaKnown RBP3.82□□□□□ -1.8
SEC23A-207ENST00000554615 CASP8Q14790 479 aa3.82□□□□□ -1.8
SEC23A-207ENST00000554615 PPP1R15BQ5SWA1 713 aa3.82□□□□□ -1.8
SEC23A-207ENST00000554615 ARMC3Q5W041 872 aa3.82□□□□□ -1.8
SEC23A-207ENST00000554615 XRRA1Q6P2D8 792 aa3.82□□□□□ -1.8
SEC23A-207ENST00000554615 TLDC1Q6P9B6 456 aa3.82□□□□□ -1.8
SEC23A-207ENST00000554615 JAMLQ86YT9 394 aa3.82□□□□□ -1.8
SEC23A-207ENST00000554615 ZNF317Q96PQ6 595 aaPredicted RBP3.82□□□□□ -1.8
SEC23A-207ENST00000554615 RPS6KC1Q96S38 1066 aa3.82□□□□□ -1.8
SEC23A-207ENST00000554615 NT5C3AQ9H0P0 336 aa3.82□□□□□ -1.8
SEC23A-207ENST00000554615 DHX36Q9H2U1 1008 aaKnown RBP3.82□□□□□ -1.8
SEC23A-207ENST00000554615 LCMT1Q9UIC8 334 aa3.82□□□□□ -1.8
SEC23A-207ENST00000554615 MYPNQ86TC9 1320 aa3.82□□□□□ -1.8
SEC23A-207ENST00000554615 CTAGE9A4FU28 777 aa3.82□□□□□ -1.8
SEC23A-207ENST00000554615 USP17L12C9JPN9 530 aa3.82□□□□□ -1.8
SEC23A-207ENST00000554615 USP17L21D6R901 530 aa3.82□□□□□ -1.8
SEC23A-207ENST00000554615 CYP2D6P10635 497 aa3.82□□□□□ -1.8
SEC23A-207ENST00000554615 TSHRP16473 764 aa3.82□□□□□ -1.8
SEC23A-207ENST00000554615 IVDP26440 423 aa3.82□□□□□ -1.8
SEC23A-207ENST00000554615 PRDX5P30044 214 aa3.82□□□□□ -1.8
SEC23A-207ENST00000554615 GTF2BQ00403 316 aa3.82□□□□□ -1.8
SEC23A-207ENST00000554615 FKBP4Q02790 459 aaKnown RBP eCLIP3.82□□□□□ -1.8
SEC23A-207ENST00000554615 KLF1Q13351 362 aaPredicted RBP3.82□□□□□ -1.8
SEC23A-207ENST00000554615 ACVR2BQ13705 512 aa3.82□□□□□ -1.8
SEC23A-207ENST00000554615 SMC1AQ14683 1233 aaKnown RBP3.82□□□□□ -1.8
SEC23A-207ENST00000554615 NONOQ15233 471 aaKnown RBP eCLIP3.82□□□□□ -1.8
SEC23A-207ENST00000554615 ZDHHC24Q6UX98 284 aa3.82□□□□□ -1.8
SEC23A-207ENST00000554615 CCDC84Q86UT8 332 aaPredicted RBP3.82□□□□□ -1.8
SEC23A-207ENST00000554615 IQCA1Q86XH1 822 aa3.82□□□□□ -1.8
SEC23A-207ENST00000554615 SLFN12Q8IYM2 578 aa3.82□□□□□ -1.8
SEC23A-207ENST00000554615 GRAMD1CQ8IYS0 662 aa3.82□□□□□ -1.8
SEC23A-207ENST00000554615 ZNF276Q8N554 614 aa3.82□□□□□ -1.8
SEC23A-207ENST00000554615 USP38Q8NB14 1042 aa3.82□□□□□ -1.8
SEC23A-207ENST00000554615 CXorf38Q8TB03 319 aa3.82□□□□□ -1.8
SEC23A-207ENST00000554615 WHAMMQ8TF30 809 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms