RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 FTOQ9C0B1 505 aaKnown RBP eCLIP14.15□□□□□ -0.14
SHMT2-214ENST00000554604 SEMA6BQ9H3T3 888 aa14.15□□□□□ -0.14
SHMT2-214ENST00000554604 STXBP5LQ9Y2K9 1186 aa14.15□□□□□ -0.14
SHMT2-214ENST00000554604 TMEM265A0A087WTH1 108 aa14.14□□□□□ -0.15
SHMT2-214ENST00000554604 FSD2A1L4K1 749 aa14.14□□□□□ -0.15
SHMT2-214ENST00000554604 PFKFB2O60825 505 aa14.14□□□□□ -0.15
SHMT2-214ENST00000554604 PPFIA3O75145 1194 aa14.14□□□□□ -0.15
SHMT2-214ENST00000554604 F13A1P00488 732 aa14.14□□□□□ -0.15
SHMT2-214ENST00000554604 SCG2P13521 617 aa14.14□□□□□ -0.15
SHMT2-214ENST00000554604 ITGB5P18084 799 aa14.14□□□□□ -0.15
SHMT2-214ENST00000554604 PFKFB3Q16875 520 aaPredicted RBP14.14□□□□□ -0.15
SHMT2-214ENST00000554604 TYW1BQ6NUM6 668 aa14.14□□□□□ -0.15
SHMT2-214ENST00000554604 TMEM87AQ8NBN3 555 aa14.14□□□□□ -0.15
SHMT2-214ENST00000554604 AFAP1L1Q8TED9 768 aa14.14□□□□□ -0.15
SHMT2-214ENST00000554604 CCDC12Q8WUD4 166 aaPredicted RBP14.14□□□□□ -0.15
SHMT2-214ENST00000554604 GPR20Q99678 358 aa14.14□□□□□ -0.15
SHMT2-214ENST00000554604 LLPHQ9BRT6 129 aaKnown RBP14.14□□□□□ -0.15
SHMT2-214ENST00000554604 C16orf70Q9BSU1 422 aa14.14□□□□□ -0.15
SHMT2-214ENST00000554604 PKD2L1Q9P0L9 805 aa14.14□□□□□ -0.15
SHMT2-214ENST00000554604 CXXC1Q9P0U4 656 aaPredicted RBP14.14□□□□□ -0.15
SHMT2-214ENST00000554604 MSRAQ9UJ68 235 aa14.14□□□□□ -0.15
SHMT2-214ENST00000554604 ZNF215Q9UL58 517 aaPredicted RBP14.14□□□□□ -0.15
SHMT2-214ENST00000554604 MTMR6Q9Y217 621 aa14.14□□□□□ -0.15
SHMT2-214ENST00000554604 SLC4A7Q9Y6M7 1214 aa14.14□□□□□ -0.15
SHMT2-214ENST00000554604 GRXCR1A8MXD5 290 aa14.13□□□□□ -0.15
SHMT2-214ENST00000554604 MAFGO15525 162 aa14.13□□□□□ -0.15
SHMT2-214ENST00000554604 PRPF40AO75400 957 aaKnown RBP14.13□□□□□ -0.15
SHMT2-214ENST00000554604 MBD3O95983 291 aa14.13□□□□□ -0.15
SHMT2-214ENST00000554604 SELPP16109 830 aa14.13□□□□□ -0.15
SHMT2-214ENST00000554604 EVCP57679 992 aa14.13□□□□□ -0.15
SHMT2-214ENST00000554604 CCT2P78371 535 aaKnown RBP14.13□□□□□ -0.15
SHMT2-214ENST00000554604 PTK7Q13308 1070 aa14.13□□□□□ -0.15
SHMT2-214ENST00000554604 UTP14CQ5TAP6 766 aaKnown RBP14.13□□□□□ -0.15
SHMT2-214ENST00000554604 FOXD4L5Q5VV16 416 aaPredicted RBP14.13□□□□□ -0.15
SHMT2-214ENST00000554604 FOXD4L4Q8WXT5 416 aaPredicted RBP14.13□□□□□ -0.15
SHMT2-214ENST00000554604 TIFAQ96CG3 184 aa14.13□□□□□ -0.15
SHMT2-214ENST00000554604 PGBD1Q96JS3 809 aa14.13□□□□□ -0.15
SHMT2-214ENST00000554604 GUCD1Q96NT3 240 aa14.13□□□□□ -0.15
SHMT2-214ENST00000554604 CTAGE1Q96RT6 745 aa14.13□□□□□ -0.15
SHMT2-214ENST00000554604 GZF1Q9H116 711 aaPredicted RBP14.13□□□□□ -0.15
SHMT2-214ENST00000554604 TTYH1Q9H313 450 aaPredicted RBP14.13□□□□□ -0.15
SHMT2-214ENST00000554604 UBIAD1Q9Y5Z9 338 aa14.13□□□□□ -0.15
SHMT2-214ENST00000554604 MYH9P35579 1960 aaKnown RBP14.13□□□□□ -0.15
SHMT2-214ENST00000554604 NID2Q14112 1375 aa14.12□□□□□ -0.15
SHMT2-214ENST00000554604 CDH23Q9H251 3354 aa14.12□□□□□ -0.15
SHMT2-214ENST00000554604 C17orf102A2RUQ5 167 aa14.12□□□□□ -0.15
SHMT2-214ENST00000554604 GOLGA6L3A6NEY3 463 aa14.12□□□□□ -0.15
SHMT2-214ENST00000554604 PRPF3O43395 683 aaKnown RBP14.12□□□□□ -0.15
SHMT2-214ENST00000554604 ATP9AO75110 1047 aa14.12□□□□□ -0.15
SHMT2-214ENST00000554604 PARNO95453 639 aaKnown RBP14.12□□□□□ -0.15
SHMT2-214ENST00000554604 SMIM10L2AP0DMW4 78 aa14.12□□□□□ -0.15
SHMT2-214ENST00000554604 SMIM10L2BP0DMW5 78 aa14.12□□□□□ -0.15
SHMT2-214ENST00000554604 CKBP12277 381 aa14.12□□□□□ -0.15
SHMT2-214ENST00000554604 KCNA2P16389 499 aa14.12□□□□□ -0.15
SHMT2-214ENST00000554604 PDIA3P30101 505 aaKnown RBP14.12□□□□□ -0.15
SHMT2-214ENST00000554604 ZNF76P36508 570 aa14.12□□□□□ -0.15
SHMT2-214ENST00000554604 ZNF200P98182 395 aaPredicted RBP14.12□□□□□ -0.15
SHMT2-214ENST00000554604 AP3B2Q13367 1082 aa14.12□□□□□ -0.15
SHMT2-214ENST00000554604 RAB30Q15771 203 aa14.12□□□□□ -0.15
SHMT2-214ENST00000554604 LRRC8DQ7L1W4 858 aa14.12□□□□□ -0.15
SHMT2-214ENST00000554604 TRIM50Q86XT4 487 aa14.12□□□□□ -0.15
SHMT2-214ENST00000554604 ATP6V0A1Q93050 837 aa14.12□□□□□ -0.15
SHMT2-214ENST00000554604 PHKBQ93100 1093 aa14.12□□□□□ -0.15
SHMT2-214ENST00000554604 ZNF274Q96GC6 653 aaPredicted RBP14.12□□□□□ -0.15
SHMT2-214ENST00000554604 CDX2Q99626 313 aaPredicted RBP14.12□□□□□ -0.15
SHMT2-214ENST00000554604 ANO3Q9BYT9 981 aa14.12□□□□□ -0.15
SHMT2-214ENST00000554604 PBX4Q9BYU1 374 aa14.12□□□□□ -0.15
SHMT2-214ENST00000554604 C6orf50Q9HD87 102 aa14.12□□□□□ -0.15
SHMT2-214ENST00000554604 JADE2Q9NQC1 790 aa14.12□□□□□ -0.15
SHMT2-214ENST00000554604 CPLX1O14810 134 aa14.11□□□□□ -0.15
SHMT2-214ENST00000554604 GNAT1P11488 350 aa14.11□□□□□ -0.15
SHMT2-214ENST00000554604 ATP2A2P16615 1042 aaKnown RBP14.11□□□□□ -0.15
SHMT2-214ENST00000554604 GNA11P29992 359 aa14.11□□□□□ -0.15
SHMT2-214ENST00000554604 TCF7P36402 384 aaPredicted RBP14.11□□□□□ -0.15
SHMT2-214ENST00000554604 PBX2P40425 430 aa14.11□□□□□ -0.15
SHMT2-214ENST00000554604 CEP55Q53EZ4 464 aa14.11□□□□□ -0.15
SHMT2-214ENST00000554604 JAKMIP3Q5VZ66 844 aa14.11□□□□□ -0.15
SHMT2-214ENST00000554604 LARP1BQ659C4 914 aaKnown RBP14.11□□□□□ -0.15
SHMT2-214ENST00000554604 MCTP2Q6DN12 878 aa14.11□□□□□ -0.15
SHMT2-214ENST00000554604 TRIM22Q8IYM9 498 aa14.11□□□□□ -0.15
SHMT2-214ENST00000554604 REXO1Q8N1G1 1221 aaKnown RBP14.11□□□□□ -0.15
SHMT2-214ENST00000554604 SEPT1Q8WYJ6 367 aa14.11□□□□□ -0.15
SHMT2-214ENST00000554604 DHX38Q92620 1227 aaKnown RBP14.11□□□□□ -0.15
SHMT2-214ENST00000554604 VWCEQ96DN2 955 aa14.11□□□□□ -0.15
SHMT2-214ENST00000554604 MXRA8Q9BRK3 442 aa14.11□□□□□ -0.15
SHMT2-214ENST00000554604 SLC26A6Q9BXS9 759 aa14.11□□□□□ -0.15
SHMT2-214ENST00000554604 RNF26Q9BY78 433 aaPredicted RBP14.11□□□□□ -0.15
SHMT2-214ENST00000554604 ZNF576Q9H609 170 aa14.11□□□□□ -0.15
SHMT2-214ENST00000554604 NCOA5Q9HCD5 579 aaKnown RBP14.11□□□□□ -0.15
SHMT2-214ENST00000554604 KCNH7Q9NS40 1196 aa14.11□□□□□ -0.15
SHMT2-214ENST00000554604 TMEM260Q9NX78 707 aa14.11□□□□□ -0.15
SHMT2-214ENST00000554604 A0A0C4DFX4 3053 aa14.11□□□□□ -0.15
SHMT2-214ENST00000554604 CHD9Q3L8U1 2897 aa14.1□□□□□ -0.15
SHMT2-214ENST00000554604 ESYT2A0FGR8 921 aa14.1□□□□□ -0.15
SHMT2-214ENST00000554604 IFNAR1P17181 557 aa14.1□□□□□ -0.15
SHMT2-214ENST00000554604 SREBF1P36956 1147 aa14.1□□□□□ -0.15
SHMT2-214ENST00000554604 THPOP40225 353 aa14.1□□□□□ -0.15
SHMT2-214ENST00000554604 CLK2P49760 499 aaKnown RBP14.1□□□□□ -0.15
SHMT2-214ENST00000554604 RBL2Q08999 1139 aa14.1□□□□□ -0.15
SHMT2-214ENST00000554604 STK3Q13188 491 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 122.9 ms