RNA–Protein interactions for RNA: ENST00000554393.2

PTCD2P1-201, Transcript of pentatricopeptide repeat domain 2 pseudogene 1, humanhuman

BASIC

Gene PTCD2P1, Length 1,136 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2P1-201ENST00000554393 PTK7Q13308 1070 aa11.92□□□□□ -0.5
PTCD2P1-201ENST00000554393 PFKFB3Q16875 520 aaPredicted RBP11.92□□□□□ -0.5
PTCD2P1-201ENST00000554393 MCTP2Q6DN12 878 aa11.92□□□□□ -0.5
PTCD2P1-201ENST00000554393 TYW1BQ6NUM6 668 aa11.92□□□□□ -0.5
PTCD2P1-201ENST00000554393 RUFY3Q7L099 469 aa11.92□□□□□ -0.5
PTCD2P1-201ENST00000554393 VWCEQ96DN2 955 aa11.92□□□□□ -0.5
PTCD2P1-201ENST00000554393 SCLYQ96I15 445 aa11.92□□□□□ -0.5
PTCD2P1-201ENST00000554393 GPR20Q99678 358 aa11.92□□□□□ -0.5
PTCD2P1-201ENST00000554393 ZSWIM6Q9HCJ5 1215 aa11.92□□□□□ -0.5
PTCD2P1-201ENST00000554393 NAP1L2Q9ULW6 460 aaPredicted RBP11.92□□□□□ -0.5
PTCD2P1-201ENST00000554393 UBIAD1Q9Y5Z9 338 aa11.92□□□□□ -0.5
PTCD2P1-201ENST00000554393 MYO9BQ13459 2157 aa11.91□□□□□ -0.5
PTCD2P1-201ENST00000554393 TTC28Q96AY4 2481 aa11.91□□□□□ -0.5
PTCD2P1-201ENST00000554393 H3BRB1 525 aa11.91□□□□□ -0.5
PTCD2P1-201ENST00000554393 ACTN1P12814 892 aa11.91□□□□□ -0.5
PTCD2P1-201ENST00000554393 SCG2P13521 617 aa11.91□□□□□ -0.5
PTCD2P1-201ENST00000554393 SELPP16109 830 aa11.91□□□□□ -0.5
PTCD2P1-201ENST00000554393 KCNA2P16389 499 aa11.91□□□□□ -0.5
PTCD2P1-201ENST00000554393 ITGB5P18084 799 aa11.91□□□□□ -0.5
PTCD2P1-201ENST00000554393 DNAJB2P25686 324 aa11.91□□□□□ -0.5
PTCD2P1-201ENST00000554393 ADD1P35611 737 aaKnown RBP11.91□□□□□ -0.5
PTCD2P1-201ENST00000554393 CLK2P49760 499 aaKnown RBP11.91□□□□□ -0.5
PTCD2P1-201ENST00000554393 MTMR1Q13613 665 aa11.91□□□□□ -0.5
PTCD2P1-201ENST00000554393 CYFIP1Q7L576 1253 aa11.91□□□□□ -0.5
PTCD2P1-201ENST00000554393 CCDC12Q8WUD4 166 aaPredicted RBP11.91□□□□□ -0.5
PTCD2P1-201ENST00000554393 PPP1R13LQ8WUF5 828 aa11.91□□□□□ -0.5
PTCD2P1-201ENST00000554393 GUCD1Q96NT3 240 aa11.91□□□□□ -0.5
PTCD2P1-201ENST00000554393 ALG1Q9BT22 464 aa11.91□□□□□ -0.5
PTCD2P1-201ENST00000554393 RNF26Q9BY78 433 aaPredicted RBP11.91□□□□□ -0.5
PTCD2P1-201ENST00000554393 TTYH1Q9H313 450 aaPredicted RBP11.91□□□□□ -0.5
PTCD2P1-201ENST00000554393 SEMA6BQ9H3T3 888 aa11.91□□□□□ -0.5
PTCD2P1-201ENST00000554393 TUT1Q9H6E5 874 aaKnown RBP11.91□□□□□ -0.5
PTCD2P1-201ENST00000554393 JADE2Q9NQC1 790 aa11.91□□□□□ -0.5
PTCD2P1-201ENST00000554393 ZNF215Q9UL58 517 aaPredicted RBP11.91□□□□□ -0.5
PTCD2P1-201ENST00000554393 CYP46A1Q9Y6A2 500 aa11.91□□□□□ -0.5
PTCD2P1-201ENST00000554393 PTPRSQ13332 1948 aa11.9□□□□□ -0.5
PTCD2P1-201ENST00000554393 SMCO2A6NFE2 343 aa11.9□□□□□ -0.5
PTCD2P1-201ENST00000554393 TNFRSF10AO00220 468 aa11.9□□□□□ -0.5
PTCD2P1-201ENST00000554393 PRPF3O43395 683 aaKnown RBP11.9□□□□□ -0.5
PTCD2P1-201ENST00000554393 EIF5BO60841 1220 aaKnown RBP11.9□□□□□ -0.5
PTCD2P1-201ENST00000554393 PPP1R37O75864 691 aa11.9□□□□□ -0.5
PTCD2P1-201ENST00000554393 IFNAR1P17181 557 aa11.9□□□□□ -0.5
PTCD2P1-201ENST00000554393 SREBF1P36956 1147 aa11.9□□□□□ -0.5
PTCD2P1-201ENST00000554393 RAB30Q15771 203 aa11.9□□□□□ -0.5
PTCD2P1-201ENST00000554393 LRRC8DQ7L1W4 858 aa11.9□□□□□ -0.5
PTCD2P1-201ENST00000554393 OTOP2Q7RTS6 562 aa11.9□□□□□ -0.5
PTCD2P1-201ENST00000554393 DHX38Q92620 1227 aaKnown RBP11.9□□□□□ -0.5
PTCD2P1-201ENST00000554393 TIFAQ96CG3 184 aa11.9□□□□□ -0.5
PTCD2P1-201ENST00000554393 ZMYND12Q9H0C1 365 aa11.9□□□□□ -0.5
PTCD2P1-201ENST00000554393 BCAS3Q9H6U6 928 aa11.9□□□□□ -0.5
PTCD2P1-201ENST00000554393 CXXC1Q9P0U4 656 aaPredicted RBP11.9□□□□□ -0.5
PTCD2P1-201ENST00000554393 C17orf102A2RUQ5 167 aa11.89□□□□□ -0.51
PTCD2P1-201ENST00000554393 SORBS3O60504 671 aa11.89□□□□□ -0.51
PTCD2P1-201ENST00000554393 CAND2O75155 1236 aa11.89□□□□□ -0.51
PTCD2P1-201ENST00000554393 BAIAP3O94812 1187 aa11.89□□□□□ -0.51
PTCD2P1-201ENST00000554393 GNAT1P11488 350 aa11.89□□□□□ -0.51
PTCD2P1-201ENST00000554393 CKBP12277 381 aa11.89□□□□□ -0.51
PTCD2P1-201ENST00000554393 PDIA3P30101 505 aaKnown RBP11.89□□□□□ -0.51
PTCD2P1-201ENST00000554393 TOB2Q14106 344 aaPredicted RBP11.89□□□□□ -0.51
PTCD2P1-201ENST00000554393 NTRK3Q16288 839 aa11.89□□□□□ -0.51
PTCD2P1-201ENST00000554393 PKN1Q16512 942 aa11.89□□□□□ -0.51
PTCD2P1-201ENST00000554393 TRIM71Q2Q1W2 868 aaKnown RBP11.89□□□□□ -0.51
PTCD2P1-201ENST00000554393 NIPA1Q7RTP0 329 aa11.89□□□□□ -0.51
PTCD2P1-201ENST00000554393 DEFB128Q7Z7B8 93 aa11.89□□□□□ -0.51
PTCD2P1-201ENST00000554393 SERINC5Q86VE9 423 aa11.89□□□□□ -0.51
PTCD2P1-201ENST00000554393 ZNF274Q96GC6 653 aaPredicted RBP11.89□□□□□ -0.51
PTCD2P1-201ENST00000554393 MXRA8Q9BRK3 442 aa11.89□□□□□ -0.51
PTCD2P1-201ENST00000554393 ANO3Q9BYT9 981 aa11.89□□□□□ -0.51
PTCD2P1-201ENST00000554393 PBX4Q9BYU1 374 aa11.89□□□□□ -0.51
PTCD2P1-201ENST00000554393 SLC4A7Q9Y6M7 1214 aa11.89□□□□□ -0.51
PTCD2P1-201ENST00000554393 MICAL3Q7RTP6 2002 aa11.89□□□□□ -0.51
PTCD2P1-201ENST00000554393 NFASCO94856 1347 aa11.88□□□□□ -0.51
PTCD2P1-201ENST00000554393 WDR81Q562E7 1941 aa11.88□□□□□ -0.51
PTCD2P1-201ENST00000554393 ATP9AO75110 1047 aa11.88□□□□□ -0.51
PTCD2P1-201ENST00000554393 CXCL10P02778 98 aa11.88□□□□□ -0.51
PTCD2P1-201ENST00000554393 SMIM10L2AP0DMW4 78 aa11.88□□□□□ -0.51
PTCD2P1-201ENST00000554393 SMIM10L2BP0DMW5 78 aa11.88□□□□□ -0.51
PTCD2P1-201ENST00000554393 GNA11P29992 359 aa11.88□□□□□ -0.51
PTCD2P1-201ENST00000554393 TCF7P36402 384 aaPredicted RBP11.88□□□□□ -0.51
PTCD2P1-201ENST00000554393 ANAPC15P60006 121 aa11.88□□□□□ -0.51
PTCD2P1-201ENST00000554393 AKAP17AQ02040 695 aaKnown RBP11.88□□□□□ -0.51
PTCD2P1-201ENST00000554393 CEP55Q53EZ4 464 aa11.88□□□□□ -0.51
PTCD2P1-201ENST00000554393 FAM177A1Q8N128 213 aaPredicted RBP11.88□□□□□ -0.51
PTCD2P1-201ENST00000554393 CCDC148Q8NFR7 591 aa11.88□□□□□ -0.51
PTCD2P1-201ENST00000554393 PHOSPHO2Q8TCD6 241 aa11.88□□□□□ -0.51
PTCD2P1-201ENST00000554393 BICD2Q8TD16 824 aa11.88□□□□□ -0.51
PTCD2P1-201ENST00000554393 CRYGNQ8WXF5 182 aa11.88□□□□□ -0.51
PTCD2P1-201ENST00000554393 SEPT1Q8WYJ6 367 aa11.88□□□□□ -0.51
PTCD2P1-201ENST00000554393 FAM161BQ96MY7 647 aa11.88□□□□□ -0.51
PTCD2P1-201ENST00000554393 SLC9A7Q96T83 725 aa11.88□□□□□ -0.51
PTCD2P1-201ENST00000554393 CDX2Q99626 313 aaPredicted RBP11.88□□□□□ -0.51
PTCD2P1-201ENST00000554393 C6orf50Q9HD87 102 aa11.88□□□□□ -0.51
PTCD2P1-201ENST00000554393 KCNH7Q9NS40 1196 aa11.88□□□□□ -0.51
PTCD2P1-201ENST00000554393 MSRAQ9UJ68 235 aa11.88□□□□□ -0.51
PTCD2P1-201ENST00000554393 MYH9P35579 1960 aaKnown RBP11.88□□□□□ -0.51
PTCD2P1-201ENST00000554393 EMSYQ7Z589 1322 aa11.87□□□□□ -0.51
PTCD2P1-201ENST00000554393 ZBBXA8MT70 800 aa11.87□□□□□ -0.51
PTCD2P1-201ENST00000554393 GRXCR1A8MXD5 290 aa11.87□□□□□ -0.51
PTCD2P1-201ENST00000554393 MEIS1O00470 390 aa11.87□□□□□ -0.51
PTCD2P1-201ENST00000554393 CYP3A4P08684 503 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms