RNA–Protein interactions for RNA: ENST00000554290.1

CPSF2-203, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-203ENST00000554290 ADAM17P78536 824 aa21.51■■□□□ 1.03
CPSF2-203ENST00000554290 KRT40Q6A162 431 aa21.51■■□□□ 1.03
CPSF2-203ENST00000554290 SPRED2Q7Z698 418 aa21.51■■□□□ 1.03
CPSF2-203ENST00000554290 TEX2Q8IWB9 1127 aa21.51■■□□□ 1.03
CPSF2-203ENST00000554290 MYOCDQ8IZQ8 938 aa21.51■■□□□ 1.03
CPSF2-203ENST00000554290 LMBR1Q8WVP7 490 aa21.51■■□□□ 1.03
CPSF2-203ENST00000554290 UHRF1Q96T88 793 aaPredicted RBP21.51■■□□□ 1.03
CPSF2-203ENST00000554290 TELO2Q9Y4R8 837 aa21.51■■□□□ 1.03
CPSF2-203ENST00000554290 TRANK1O15050 2925 aa21.51■■□□□ 1.03
CPSF2-203ENST00000554290 LPXNO60711 386 aa21.5■■□□□ 1.03
CPSF2-203ENST00000554290 TFF2Q03403 129 aa21.5■■□□□ 1.03
CPSF2-203ENST00000554290 DHX32Q7L7V1 743 aaKnown RBP21.5■■□□□ 1.03
CPSF2-203ENST00000554290 JADE2Q9NQC1 790 aa21.5■■□□□ 1.03
CPSF2-203ENST00000554290 ERAP1Q9NZ08 941 aa21.5■■□□□ 1.03
CPSF2-203ENST00000554290 MTUS1Q9ULD2 1270 aa21.5■■□□□ 1.03
CPSF2-203ENST00000554290 TTC28Q96AY4 2481 aa21.5■■□□□ 1.03
CPSF2-203ENST00000554290 ZBTB43O43298 467 aa21.49■■□□□ 1.03
CPSF2-203ENST00000554290 EXOSC10Q01780 885 aaKnown RBP21.49■■□□□ 1.03
CPSF2-203ENST00000554290 MKRN4PQ13434 485 aaPredicted RBP21.49■■□□□ 1.03
CPSF2-203ENST00000554290 KRT32Q14532 448 aa21.49■■□□□ 1.03
CPSF2-203ENST00000554290 RTN1Q16799 776 aa21.49■■□□□ 1.03
CPSF2-203ENST00000554290 TSGA10IPQ3SY00 556 aa21.49■■□□□ 1.03
CPSF2-203ENST00000554290 TAF2Q6P1X5 1199 aa21.49■■□□□ 1.03
CPSF2-203ENST00000554290 RSPH3Q86UC2 560 aa21.49■■□□□ 1.03
CPSF2-203ENST00000554290 GDPD5Q8WTR4 605 aa21.49■■□□□ 1.03
CPSF2-203ENST00000554290 APBB2Q92870 758 aa21.49■■□□□ 1.03
CPSF2-203ENST00000554290 GLG1Q92896 1179 aa21.49■■□□□ 1.03
CPSF2-203ENST00000554290 SMARCAD1Q9H4L7 1026 aa21.49■■□□□ 1.03
CPSF2-203ENST00000554290 SUGCTQ9HAC7 445 aa21.49■■□□□ 1.03
CPSF2-203ENST00000554290 GSTTP1A0A1W2PQM5 241 aa21.48■■□□□ 1.03
CPSF2-203ENST00000554290 FOSP01100 380 aaPredicted RBP21.48■■□□□ 1.03
CPSF2-203ENST00000554290 BMP1P13497 986 aa21.48■■□□□ 1.03
CPSF2-203ENST00000554290 NAPAP54920 295 aa21.48■■□□□ 1.03
CPSF2-203ENST00000554290 HTRA4P83105 476 aaPredicted RBP21.48■■□□□ 1.03
CPSF2-203ENST00000554290 FAM26DQ5JW98 314 aa21.48■■□□□ 1.03
CPSF2-203ENST00000554290 WWC2Q6AWC2 1192 aa21.48■■□□□ 1.03
CPSF2-203ENST00000554290 HLA-CQ95604 372 aa21.48■■□□□ 1.03
CPSF2-203ENST00000554290 PKD2L1Q9P0L9 805 aa21.48■■□□□ 1.03
CPSF2-203ENST00000554290 PTPRSQ13332 1948 aa21.48■■□□□ 1.03
CPSF2-203ENST00000554290 VCANP13611 3396 aa21.48■■□□□ 1.03
CPSF2-203ENST00000554290 hCG_1984214I3L0E3 225 aa21.47■■□□□ 1.03
CPSF2-203ENST00000554290 CDC45O75419 566 aa21.47■■□□□ 1.03
CPSF2-203ENST00000554290 HMGB1P09429 215 aaKnown RBP21.47■■□□□ 1.03
CPSF2-203ENST00000554290 PPFIA1Q13136 1202 aa21.47■■□□□ 1.03
CPSF2-203ENST00000554290 PPP1R18Q6NYC8 613 aa21.47■■□□□ 1.03
CPSF2-203ENST00000554290 RPAINQ86UA6 219 aa21.47■■□□□ 1.03
CPSF2-203ENST00000554290 ZNF713Q8N859 430 aaPredicted RBP21.47■■□□□ 1.03
CPSF2-203ENST00000554290 TOP1MTQ969P6 601 aa21.47■■□□□ 1.03
CPSF2-203ENST00000554290 IFIH1Q9BYX4 1025 aaKnown RBP21.47■■□□□ 1.03
CPSF2-203ENST00000554290 RIC8AQ9NPQ8 531 aa21.47■■□□□ 1.03
CPSF2-203ENST00000554290 BRPF3Q9ULD4 1205 aa21.47■■□□□ 1.03
CPSF2-203ENST00000554290 V9GY48 417 aaPredicted RBP21.47■■□□□ 1.03
CPSF2-203ENST00000554290 CNTNAP5Q8WYK1 1306 aa21.47■■□□□ 1.03
CPSF2-203ENST00000554290 PRRC2BQ5JSZ5 2229 aaKnown RBP21.46■■□□□ 1.03
CPSF2-203ENST00000554290 MARK3P27448 753 aa21.46■■□□□ 1.03
CPSF2-203ENST00000554290 ADCY7P51828 1080 aa21.46■■□□□ 1.03
CPSF2-203ENST00000554290 GRIK4Q16099 956 aa21.46■■□□□ 1.03
CPSF2-203ENST00000554290 SKAP1Q86WV1 359 aa21.46■■□□□ 1.03
CPSF2-203ENST00000554290 FBXO22Q8NEZ5 403 aa21.46■■□□□ 1.03
CPSF2-203ENST00000554290 SP7Q8TDD2 431 aaPredicted RBP21.46■■□□□ 1.03
CPSF2-203ENST00000554290 TNPO1Q92973 898 aaKnown RBP21.46■■□□□ 1.03
CPSF2-203ENST00000554290 TCEANC2Q96MN5 208 aa21.46■■□□□ 1.03
CPSF2-203ENST00000554290 YME1L1Q96TA2 773 aa21.46■■□□□ 1.03
CPSF2-203ENST00000554290 MXRA8Q9BRK3 442 aa21.46■■□□□ 1.03
CPSF2-203ENST00000554290 GLT8D2Q9H1C3 349 aa21.46■■□□□ 1.03
CPSF2-203ENST00000554290 KLF18A0A0U1RQI7 1052 aa21.45■■□□□ 1.02
CPSF2-203ENST00000554290 GOLGA8AA7E2F4 631 aa21.45■■□□□ 1.02
CPSF2-203ENST00000554290 GOLGA8BA8MQT2 603 aa21.45■■□□□ 1.02
CPSF2-203ENST00000554290 UPP2O95045 317 aa21.45■■□□□ 1.02
CPSF2-203ENST00000554290 KCNQ1P51787 676 aa21.45■■□□□ 1.02
CPSF2-203ENST00000554290 FGD1P98174 961 aa21.45■■□□□ 1.02
CPSF2-203ENST00000554290 ADCK5Q3MIX3 580 aa21.45■■□□□ 1.02
CPSF2-203ENST00000554290 RASEFQ8IZ41 740 aa21.45■■□□□ 1.02
CPSF2-203ENST00000554290 SAMD11Q96NU1 681 aa21.45■■□□□ 1.02
CPSF2-203ENST00000554290 SDF4Q9BRK5 362 aa21.45■■□□□ 1.02
CPSF2-203ENST00000554290 OSBPL7Q9BZF2 842 aa21.45■■□□□ 1.02
CPSF2-203ENST00000554290 AZI2Q9H6S1 392 aa21.45■■□□□ 1.02
CPSF2-203ENST00000554290 JPH1Q9HDC5 661 aaPredicted RBP21.45■■□□□ 1.02
CPSF2-203ENST00000554290 KCNH7Q9NS40 1196 aa21.45■■□□□ 1.02
CPSF2-203ENST00000554290 SLC9A2Q9UBY0 812 aa21.45■■□□□ 1.02
CPSF2-203ENST00000554290 TUBE1Q9UJT0 475 aa21.45■■□□□ 1.02
CPSF2-203ENST00000554290 DOCK5Q9H7D0 1870 aa21.44■■□□□ 1.02
CPSF2-203ENST00000554290 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.44■■□□□ 1.02
CPSF2-203ENST00000554290 RRN3P2A6NIE6 340 aa21.44■■□□□ 1.02
CPSF2-203ENST00000554290 RBAK-RBAKDNI3L0D1 243 aa21.44■■□□□ 1.02
CPSF2-203ENST00000554290 CHRNA1P02708 482 aa21.44■■□□□ 1.02
CPSF2-203ENST00000554290 RPLP2P05387 115 aaKnown RBP21.44■■□□□ 1.02
CPSF2-203ENST00000554290 RCAN1P53805 252 aa21.44■■□□□ 1.02
CPSF2-203ENST00000554290 FUT2Q10981 343 aa21.44■■□□□ 1.02
CPSF2-203ENST00000554290 RUFY4Q6ZNE9 571 aa21.44■■□□□ 1.02
CPSF2-203ENST00000554290 C17orf80Q9BSJ5 609 aa21.44■■□□□ 1.02
CPSF2-203ENST00000554290 BARHL2Q9NY43 387 aa21.44■■□□□ 1.02
CPSF2-203ENST00000554290 MBLAC1A4D2B0 266 aaPredicted RBP21.43■■□□□ 1.02
CPSF2-203ENST00000554290 SMCO2A6NFE2 343 aa21.43■■□□□ 1.02
CPSF2-203ENST00000554290 STXBP3O00186 592 aa21.43■■□□□ 1.02
CPSF2-203ENST00000554290 CEP55Q53EZ4 464 aa21.43■■□□□ 1.02
CPSF2-203ENST00000554290 TYW1BQ6NUM6 668 aa21.43■■□□□ 1.02
CPSF2-203ENST00000554290 ANO3Q9BYT9 981 aa21.43■■□□□ 1.02
CPSF2-203ENST00000554290 NAP1L2Q9ULW6 460 aaPredicted RBP21.43■■□□□ 1.02
CPSF2-203ENST00000554290 SPTBN5Q9NRC6 3674 aaKnown RBP21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms