RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 CYFIP1Q7L576 1253 aa10.18□□□□□ -0.78
TDP1-208ENST00000553989 NCOA7Q8NI08 942 aa10.18□□□□□ -0.78
TDP1-208ENST00000553989 USP26Q9BXU7 913 aa10.18□□□□□ -0.78
TDP1-208ENST00000553989 IFIH1Q9BYX4 1025 aaKnown RBP10.18□□□□□ -0.78
TDP1-208ENST00000553989 RIOX1Q9H6W3 641 aa10.18□□□□□ -0.78
TDP1-208ENST00000553989 SEC63Q9UGP8 760 aaKnown RBP10.18□□□□□ -0.78
TDP1-208ENST00000553989 SIP14410 1827 aa10.17□□□□□ -0.78
TDP1-208ENST00000553989 FAM86C2PA6NEL3 165 aa10.17□□□□□ -0.78
TDP1-208ENST00000553989 FIBPO43427 364 aa10.17□□□□□ -0.78
TDP1-208ENST00000553989 CAND2O75155 1236 aa10.17□□□□□ -0.78
TDP1-208ENST00000553989 STAM2O75886 525 aa10.17□□□□□ -0.78
TDP1-208ENST00000553989 CYP21A2P08686 494 aa10.17□□□□□ -0.78
TDP1-208ENST00000553989 ARHGAP4P98171 946 aa10.17□□□□□ -0.78
TDP1-208ENST00000553989 EPC2Q52LR7 807 aa10.17□□□□□ -0.78
TDP1-208ENST00000553989 TIGD5Q53EQ6 642 aa10.17□□□□□ -0.78
TDP1-208ENST00000553989 PLEKHG4Q58EX7 1191 aa10.17□□□□□ -0.78
TDP1-208ENST00000553989 TTC22Q5TAA0 569 aa10.17□□□□□ -0.78
TDP1-208ENST00000553989 METTL7BQ6UX53 244 aa10.17□□□□□ -0.78
TDP1-208ENST00000553989 TRIM50Q86XT4 487 aa10.17□□□□□ -0.78
TDP1-208ENST00000553989 PIP4P2Q8N4L2 257 aa10.17□□□□□ -0.78
TDP1-208ENST00000553989 CTCFLQ8NI51 663 aaPredicted RBP10.17□□□□□ -0.78
TDP1-208ENST00000553989 RRP36Q96EU6 259 aaKnown RBP10.17□□□□□ -0.78
TDP1-208ENST00000553989 SAMD11Q96NU1 681 aa10.17□□□□□ -0.78
TDP1-208ENST00000553989 LRFN3Q9BTN0 628 aa10.17□□□□□ -0.78
TDP1-208ENST00000553989 RNPEPQ9H4A4 650 aa10.17□□□□□ -0.78
TDP1-208ENST00000553989 SENP2Q9HC62 589 aa10.17□□□□□ -0.78
TDP1-208ENST00000553989 SETD4Q9NVD3 440 aa10.17□□□□□ -0.78
TDP1-208ENST00000553989 CYTH3O43739 400 aa10.16□□□□□ -0.78
TDP1-208ENST00000553989 CSPG5O95196 566 aa10.16□□□□□ -0.78
TDP1-208ENST00000553989 GSPT1P15170 499 aaKnown RBP10.16□□□□□ -0.78
TDP1-208ENST00000553989 KIF5BP33176 963 aa10.16□□□□□ -0.78
TDP1-208ENST00000553989 HTRA4P83105 476 aaPredicted RBP10.16□□□□□ -0.78
TDP1-208ENST00000553989 PTH1RQ03431 593 aa10.16□□□□□ -0.78
TDP1-208ENST00000553989 GPM6BQ13491 265 aa10.16□□□□□ -0.78
TDP1-208ENST00000553989 SLC35G1Q2M3R5 365 aa10.16□□□□□ -0.78
TDP1-208ENST00000553989 LEXMQ3ZCV2 418 aa10.16□□□□□ -0.78
TDP1-208ENST00000553989 PTCRAQ6ISU1 281 aaPredicted RBP10.16□□□□□ -0.78
TDP1-208ENST00000553989 NFXL1Q6ZNB6 911 aa10.16□□□□□ -0.78
TDP1-208ENST00000553989 NLRX1Q86UT6 975 aa10.16□□□□□ -0.78
TDP1-208ENST00000553989 APBB2Q92870 758 aa10.16□□□□□ -0.78
TDP1-208ENST00000553989 MRPL38Q96DV4 380 aaKnown RBP10.16□□□□□ -0.78
TDP1-208ENST00000553989 INPP4AQ96PE3 977 aaPredicted RBP10.16□□□□□ -0.78
TDP1-208ENST00000553989 GPR20Q99678 358 aa10.16□□□□□ -0.78
TDP1-208ENST00000553989 BCAS3Q9H6U6 928 aa10.16□□□□□ -0.78
TDP1-208ENST00000553989 XIRP2A4UGR9 3374 aa10.15□□□□□ -0.78
TDP1-208ENST00000553989 SPATA31C2B4DYI2 1134 aa10.15□□□□□ -0.78
TDP1-208ENST00000553989 E7EWF7 191 aa10.15□□□□□ -0.78
TDP1-208ENST00000553989 H3BQ06 376 aaPredicted RBP10.15□□□□□ -0.78
TDP1-208ENST00000553989 IL9P15248 144 aa10.15□□□□□ -0.78
TDP1-208ENST00000553989 MARK3P27448 753 aa10.15□□□□□ -0.78
TDP1-208ENST00000553989 ICAM3P32942 547 aa10.15□□□□□ -0.78
TDP1-208ENST00000553989 CTNNB1P35222 781 aa10.15□□□□□ -0.78
TDP1-208ENST00000553989 MRPS9P82933 396 aaKnown RBP10.15□□□□□ -0.78
TDP1-208ENST00000553989 TROAPQ12815 778 aa10.15□□□□□ -0.78
TDP1-208ENST00000553989 NFKBIBQ15653 356 aa10.15□□□□□ -0.78
TDP1-208ENST00000553989 USP17L6PQ6QN14 398 aa10.15□□□□□ -0.78
TDP1-208ENST00000553989 CASC1Q6TDU7 716 aa10.15□□□□□ -0.78
TDP1-208ENST00000553989 RSPH3Q86UC2 560 aa10.15□□□□□ -0.78
TDP1-208ENST00000553989 TMEM192Q8IY95 271 aa10.15□□□□□ -0.78
TDP1-208ENST00000553989 GJD3Q8N144 294 aa10.15□□□□□ -0.78
TDP1-208ENST00000553989 BANK1Q8NDB2 785 aa10.15□□□□□ -0.78
TDP1-208ENST00000553989 SP7Q8TDD2 431 aaPredicted RBP10.15□□□□□ -0.78
TDP1-208ENST00000553989 LMBR1Q8WVP7 490 aa10.15□□□□□ -0.78
TDP1-208ENST00000553989 TOP1MTQ969P6 601 aa10.15□□□□□ -0.78
TDP1-208ENST00000553989 UIMC1Q96RL1 719 aa10.15□□□□□ -0.78
TDP1-208ENST00000553989 MYL10Q9BUA6 226 aa10.15□□□□□ -0.78
TDP1-208ENST00000553989 PKD2L1Q9P0L9 805 aa10.15□□□□□ -0.78
TDP1-208ENST00000553989 MICAL3Q7RTP6 2002 aa10.15□□□□□ -0.78
TDP1-208ENST00000553989 FRMPD4Q14CM0 1322 aa10.14□□□□□ -0.79
TDP1-208ENST00000553989 NRCAMQ92823 1304 aa10.14□□□□□ -0.79
TDP1-208ENST00000553989 BAZ2BQ9UIF8 2168 aaKnown RBP10.14□□□□□ -0.79
TDP1-208ENST00000553989 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.14□□□□□ -0.79
TDP1-208ENST00000553989 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.14□□□□□ -0.79
TDP1-208ENST00000553989 CCDC69A6NI79 296 aa10.14□□□□□ -0.79
TDP1-208ENST00000553989 H3BNC9 293 aa10.14□□□□□ -0.79
TDP1-208ENST00000553989 DDAH1O94760 285 aa10.14□□□□□ -0.79
TDP1-208ENST00000553989 GHRP10912 638 aa10.14□□□□□ -0.79
TDP1-208ENST00000553989 CHMLP26374 656 aa10.14□□□□□ -0.79
TDP1-208ENST00000553989 HOXC8P31273 242 aa10.14□□□□□ -0.79
TDP1-208ENST00000553989 TCF7P36402 384 aaPredicted RBP10.14□□□□□ -0.79
TDP1-208ENST00000553989 PPFIA1Q13136 1202 aa10.14□□□□□ -0.79
TDP1-208ENST00000553989 SEMA3FQ13275 785 aa10.14□□□□□ -0.79
TDP1-208ENST00000553989 CSPP1Q1MSJ5 1256 aa10.14□□□□□ -0.79
TDP1-208ENST00000553989 PUS10Q3MIT2 529 aaKnown RBP10.14□□□□□ -0.79
TDP1-208ENST00000553989 TCEAL5Q5H9L2 206 aa10.14□□□□□ -0.79
TDP1-208ENST00000553989 PCNX4Q63HM2 1172 aa10.14□□□□□ -0.79
TDP1-208ENST00000553989 TAF2Q6P1X5 1199 aa10.14□□□□□ -0.79
TDP1-208ENST00000553989 ZNF654Q8IZM8 581 aa10.14□□□□□ -0.79
TDP1-208ENST00000553989 FIBCD1Q8N539 461 aa10.14□□□□□ -0.79
TDP1-208ENST00000553989 GIMAP8Q8ND71 665 aaPredicted RBP10.14□□□□□ -0.79
TDP1-208ENST00000553989 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.14□□□□□ -0.79
TDP1-208ENST00000553989 GLG1Q92896 1179 aa10.14□□□□□ -0.79
TDP1-208ENST00000553989 KHSRPQ92945 711 aaKnown RBP eCLIP10.14□□□□□ -0.79
TDP1-208ENST00000553989 IL17RAQ96F46 866 aa10.14□□□□□ -0.79
TDP1-208ENST00000553989 NSUN3Q9H649 340 aaKnown RBP10.14□□□□□ -0.79
TDP1-208ENST00000553989 CLDND1Q9NY35 253 aa10.14□□□□□ -0.79
TDP1-208ENST00000553989 FAM50BQ9Y247 325 aa10.14□□□□□ -0.79
TDP1-208ENST00000553989 REV3LO60673 3130 aa10.13□□□□□ -0.79
TDP1-208ENST00000553989 TRANK1O15050 2925 aa10.13□□□□□ -0.79
TDP1-208ENST00000553989 SPDYE3A6NKU9 549 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms