RNA–Protein interactions for RNA: ENST00000553945.1

NEK9-203, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 786 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-203ENST00000553945 MMP1P03956 469 aa26.4■■□□□ 1.82
NEK9-203ENST00000553945 CYP2C9P11712 490 aa26.4■■□□□ 1.82
NEK9-203ENST00000553945 BMP8BP34820 402 aa26.4■■□□□ 1.82
NEK9-203ENST00000553945 GUCY1B3Q02153 619 aa26.4■■□□□ 1.82
NEK9-203ENST00000553945 NR5A1Q13285 461 aa26.4■■□□□ 1.82
NEK9-203ENST00000553945 PTGISQ16647 500 aa26.4■■□□□ 1.82
NEK9-203ENST00000553945 PIK3AP1Q6ZUJ8 805 aa26.4■■□□□ 1.82
NEK9-203ENST00000553945 LENG9Q96B70 501 aa26.4■■□□□ 1.82
NEK9-203ENST00000553945 HIPK3Q9H422 1215 aa26.4■■□□□ 1.82
NEK9-203ENST00000553945 GTF2IRD1Q9UHL9 959 aa26.4■■□□□ 1.82
NEK9-203ENST00000553945 ZNF215Q9UL58 517 aaPredicted RBP26.4■■□□□ 1.82
NEK9-203ENST00000553945 TDP2O95551 362 aa26.39■■□□□ 1.82
NEK9-203ENST00000553945 CYP2C18P33260 490 aa26.39■■□□□ 1.82
NEK9-203ENST00000553945 ACTR2P61160 394 aa26.39■■□□□ 1.82
NEK9-203ENST00000553945 C8orf76Q96K31 380 aa26.39■■□□□ 1.82
NEK9-203ENST00000553945 LETM2Q2VYF4 491 aa26.38■■□□□ 1.81
NEK9-203ENST00000553945 DIS3L2Q8IYB7 885 aaKnown RBP26.38■■□□□ 1.81
NEK9-203ENST00000553945 GLG1Q92896 1179 aa26.38■■□□□ 1.81
NEK9-203ENST00000553945 NOC4LQ9BVI4 516 aaKnown RBP26.38■■□□□ 1.81
NEK9-203ENST00000553945 TBC1D22BQ9NU19 505 aa26.38■■□□□ 1.81
NEK9-203ENST00000553945 CYP3A7-CYP3A51PA0A087WV96 503 aa26.37■■□□□ 1.81
NEK9-203ENST00000553945 BTBD18B2RXH4 712 aa26.37■■□□□ 1.81
NEK9-203ENST00000553945 DHX15O43143 795 aaKnown RBP26.37■■□□□ 1.81
NEK9-203ENST00000553945 CYP3A7P24462 503 aa26.37■■□□□ 1.81
NEK9-203ENST00000553945 EARS2Q5JPH6 523 aaKnown RBP26.37■■□□□ 1.81
NEK9-203ENST00000553945 MFSD5Q6N075 450 aa26.37■■□□□ 1.81
NEK9-203ENST00000553945 NEK8Q86SG6 692 aa26.37■■□□□ 1.81
NEK9-203ENST00000553945 UMODL1Q5DID0 1318 aa26.37■■□□□ 1.81
NEK9-203ENST00000553945 FAM205CA6NFA0 338 aa26.36■■□□□ 1.81
NEK9-203ENST00000553945 MSH4O15457 936 aa26.36■■□□□ 1.81
NEK9-203ENST00000553945 CCNE2O96020 404 aa26.36■■□□□ 1.81
NEK9-203ENST00000553945 SMIM10L2AP0DMW4 78 aa26.36■■□□□ 1.81
NEK9-203ENST00000553945 SMIM10L2BP0DMW5 78 aa26.36■■□□□ 1.81
NEK9-203ENST00000553945 FPGSQ05932 587 aa26.36■■□□□ 1.81
NEK9-203ENST00000553945 SAFBQ15424 915 aaKnown RBP eCLIP26.36■■□□□ 1.81
NEK9-203ENST00000553945 Q4G0T1 1027 aa26.36■■□□□ 1.81
NEK9-203ENST00000553945 HABP4Q5JVS0 413 aaKnown RBP26.36■■□□□ 1.81
NEK9-203ENST00000553945 MOXD1Q6UVY6 613 aa26.36■■□□□ 1.81
NEK9-203ENST00000553945 TNFRSF25Q93038 417 aa26.36■■□□□ 1.81
NEK9-203ENST00000553945 SMARCAD1Q9H4L7 1026 aa26.36■■□□□ 1.81
NEK9-203ENST00000553945 AZI2Q9H6S1 392 aa26.36■■□□□ 1.81
NEK9-203ENST00000553945 TCEAL9Q9UHQ7 104 aa26.36■■□□□ 1.81
NEK9-203ENST00000553945 MARK3P27448 753 aa26.35■■□□□ 1.81
NEK9-203ENST00000553945 CCL23P55773 120 aa26.35■■□□□ 1.81
NEK9-203ENST00000553945 TMEM199Q8N511 208 aa26.35■■□□□ 1.81
NEK9-203ENST00000553945 MBOAT7Q96N66 472 aa26.35■■□□□ 1.81
NEK9-203ENST00000553945 RNPEPQ9H4A4 650 aa26.35■■□□□ 1.81
NEK9-203ENST00000553945 ERAP1Q9NZ08 941 aa26.35■■□□□ 1.81
NEK9-203ENST00000553945 DDX25Q9UHL0 483 aaKnown RBP26.35■■□□□ 1.81
NEK9-203ENST00000553945 EMSYQ7Z589 1322 aa26.35■■□□□ 1.81
NEK9-203ENST00000553945 C17orf102A2RUQ5 167 aa26.34■■□□□ 1.81
NEK9-203ENST00000553945 LGR5O75473 907 aa26.34■■□□□ 1.81
NEK9-203ENST00000553945 ZNF200P98182 395 aaPredicted RBP26.34■■□□□ 1.81
NEK9-203ENST00000553945 HIC1Q14526 733 aa26.34■■□□□ 1.81
NEK9-203ENST00000553945 CTAGE1Q96RT6 745 aa26.34■■□□□ 1.81
NEK9-203ENST00000553945 PCYT2Q99447 389 aa26.34■■□□□ 1.81
NEK9-203ENST00000553945 A0A1W2PPC1 479 aa26.33■■□□□ 1.81
NEK9-203ENST00000553945 CCNT1O60563 726 aaKnown RBP26.33■■□□□ 1.81
NEK9-203ENST00000553945 GAS7O60861 476 aa26.33■■□□□ 1.81
NEK9-203ENST00000553945 ATG7O95352 703 aa26.33■■□□□ 1.81
NEK9-203ENST00000553945 KRT76Q01546 638 aa26.33■■□□□ 1.81
NEK9-203ENST00000553945 LRCH2Q5VUJ6 765 aa26.33■■□□□ 1.81
NEK9-203ENST00000553945 ZNF746Q6NUN9 644 aaPredicted RBP26.33■■□□□ 1.81
NEK9-203ENST00000553945 ABHD15Q6UXT9 468 aa26.33■■□□□ 1.81
NEK9-203ENST00000553945 TDHQ8IZJ6 230 aa26.33■■□□□ 1.81
NEK9-203ENST00000553945 FBXO18Q8NFZ0 1043 aa26.33■■□□□ 1.81
NEK9-203ENST00000553945 SLC5A5Q92911 643 aa26.33■■□□□ 1.81
NEK9-203ENST00000553945 GJA10Q969M2 543 aa26.33■■□□□ 1.81
NEK9-203ENST00000553945 NAP1L4Q99733 375 aaKnown RBP26.33■■□□□ 1.81
NEK9-203ENST00000553945 BACH1O14867 736 aa26.32■■□□□ 1.8
NEK9-203ENST00000553945 SLC37A4O43826 429 aa26.32■■□□□ 1.8
NEK9-203ENST00000553945 CSF2RAP15509 400 aa26.32■■□□□ 1.8
NEK9-203ENST00000553945 GCFC2P16383 781 aaKnown RBP26.32■■□□□ 1.8
NEK9-203ENST00000553945 STAT5BP51692 787 aa26.32■■□□□ 1.8
NEK9-203ENST00000553945 EPHB4P54760 987 aa26.32■■□□□ 1.8
NEK9-203ENST00000553945 BFSP2Q13515 415 aa26.32■■□□□ 1.8
NEK9-203ENST00000553945 MIS18BP1Q6P0N0 1132 aa26.32■■□□□ 1.8
NEK9-203ENST00000553945 CCDC155Q8N6L0 562 aa26.32■■□□□ 1.8
NEK9-203ENST00000553945 RETREG2Q8NC44 543 aa26.32■■□□□ 1.8
NEK9-203ENST00000553945 ATP6V0A1Q93050 837 aa26.32■■□□□ 1.8
NEK9-203ENST00000553945 RIT2Q99578 217 aa26.32■■□□□ 1.8
NEK9-203ENST00000553945 TEKT3Q9BXF9 490 aa26.32■■□□□ 1.8
NEK9-203ENST00000553945 WNT8AQ9H1J5 351 aa26.32■■□□□ 1.8
NEK9-203ENST00000553945 SETD4Q9NVD3 440 aa26.32■■□□□ 1.8
NEK9-203ENST00000553945 KIF3AQ9Y496 699 aa26.32■■□□□ 1.8
NEK9-203ENST00000553945 GNAT1P11488 350 aa26.31■■□□□ 1.8
NEK9-203ENST00000553945 PTK7Q13308 1070 aa26.31■■□□□ 1.8
NEK9-203ENST00000553945 PPIGQ13427 754 aaKnown RBP eCLIP26.31■■□□□ 1.83e-6■■□□□ 13.6
NEK9-203ENST00000553945 FAM160B1Q5W0V3 765 aa26.31■■□□□ 1.8
NEK9-203ENST00000553945 PPP4R3AQ6IN85 833 aa26.31■■□□□ 1.8
NEK9-203ENST00000553945 SMAP1Q8IYB5 467 aaPredicted RBP26.31■■□□□ 1.8
NEK9-203ENST00000553945 SCLYQ96I15 445 aa26.31■■□□□ 1.8
NEK9-203ENST00000553945 SAMM50Q9Y512 469 aa26.31■■□□□ 1.8
NEK9-203ENST00000553945 TRIP12Q14669 1992 aaPredicted RBP26.31■■□□□ 1.8
NEK9-203ENST00000553945 HOXC8P31273 242 aa26.3■■□□□ 1.8
NEK9-203ENST00000553945 PLPPR4Q7Z2D5 763 aa26.3■■□□□ 1.8
NEK9-203ENST00000553945 ETNPPLQ8TBG4 499 aa26.3■■□□□ 1.8
NEK9-203ENST00000553945 DHX38Q92620 1227 aaKnown RBP26.3■■□□□ 1.8
NEK9-203ENST00000553945 IGKV6D-21A0A0A0MT36 114 aa26.29■■□□□ 1.8
NEK9-203ENST00000553945 PITPNM1O00562 1244 aa26.29■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 101.7 ms